prot_Ecto-sp6_S_contig100.758.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig100.758.1
Unique Nameprot_Ecto-sp6_S_contig100.758.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length357
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.758.1 vs. uniprot
Match: D7FRL4_ECTSI (U6 snRNA phosphodiesterase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL4_ECTSI)

HSP 1 Score: 483 bits (1243), Expect = 1.040e-169
Identity = 247/258 (95.74%), Postives = 253/258 (98.06%), Query Frame = 0
Query:    1 MDHLLEAYASSSSDDEKIGEKDPKPSVLGGLPSELLTIFKDSASRHDSLRAATEYDLATERRRAKERAGNTRWVRRFPHERGNWPTHVFIPVPNSAAFKSMAEASVSHFRQRLATAWRQGHGRAEGGKGGKKRTRDGRQRSNQASASSAGKLDPPEVVMNDMDPSGRQHLSLSKTTALRAHQIDPFVRGLKEAVKSSRSFTASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVLNLIAKVDPLMRRFKQSEYYEEPIVH 258
            MDHLLEAYASSSS+DEKI EKDP PSVLGGLPSELLTIFKDSASRHDSLRAATEYDLATERRRA+ERAGN RWVRRFPHERGNWPTHVFIPVPNSAAFKSMAEASVSHFRQRLATAWR+GHGRAEGGKGGKKRTRDGRQRSNQASASSAGKLDPPEVVMNDMDPSGRQHLSLSKTTALRAHQI+PFVRGLKEAVKSSRSFTASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVL+LIAKVDPLMRRFKQSEYYE  I+H
Sbjct:    1 MDHLLEAYASSSSEDEKIEEKDPNPSVLGGLPSELLTIFKDSASRHDSLRAATEYDLATERRRAEERAGNIRWVRRFPHERGNWPTHVFIPVPNSAAFKSMAEASVSHFRQRLATAWREGHGRAEGGKGGKKRTRDGRQRSNQASASSAGKLDPPEVVMNDMDPSGRQHLSLSKTTALRAHQINPFVRGLKEAVKSSRSFTASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVLSLIAKVDPLMRRFKQSEYYEVIIMH 258          
BLAST of mRNA_Ecto-sp6_S_contig100.758.1 vs. uniprot
Match: A0A6H5K6W9_9PHAE (U6 snRNA phosphodiesterase 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W9_9PHAE)

HSP 1 Score: 403 bits (1035), Expect = 1.590e-137
Identity = 283/357 (79.27%), Postives = 293/357 (82.07%), Query Frame = 0
Query:    1 MDHLLEAYASSSSDDEKIGEKDPKPSVLGGLPSELLTIFKDSASRHDSLRAATEYDLATERRRAKERAGNTRWVRRFPHERGNWPTHVFIPVPNSAAFKSMAEASVSHFRQRLATAWRQGHGRAEGGKGGKKRTRDGRQRSNQASASSAGKLDPPEVVMNDMDPSGRQHLSLSKTTALRAHQIDPFVRGLKEAVKSSRSFTASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVLNLIAKVDPLMRRFKQSEYYEEPIVHVSVASVLGDVSTYVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVPSEVCLPVDVVMCK 357
            MDHLLEAYASSSSDDEKI E DPKP+VLG LPSELLT+FKDS           EYDLATERRRA+ERAGN  WVRRFPHERGNWPTHVFIPVPNS+AFKSMAEASVSHFRQRLA AWR  HGRAEGGKGG+KRT DGR+RSNQASASSAGKLDPPEVVMN+MDPSGRQHLSLSKTTALRAHQIDPFV+GLK+AVKSSR                         RVRGGR+MVL LIAKVDPLMRRFKQS YYEEPIVHVSVASVLGDVSTYVSS      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          DVPSEVCL VDVVMCK
Sbjct:    1 MDHLLEAYASSSSDDEKIEENDPKPAVLGALPSELLTLFKDS-----------EYDLATERRRAEERAGNIPWVRRFPHERGNWPTHVFIPVPNSSAFKSMAEASVSHFRQRLAAAWRDRHGRAEGGKGGRKRTSDGRRRSNQASASSAGKLDPPEVVMNNMDPSGRQHLSLSKTTALRAHQIDPFVQGLKDAVKSSR-------------------------RVRGGRKMVLGLIAKVDPLMRRFKQSGYYEEPIVHVSVASVLGDVSTYVSSSSRVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISSD------DVPSEVCLTVDVVMCK 315          
BLAST of mRNA_Ecto-sp6_S_contig100.758.1 vs. uniprot
Match: A0A836CMF3_9STRA (U6 snRNA phosphodiesterase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF3_9STRA)

HSP 1 Score: 111 bits (278), Expect = 4.560e-24
Identity = 80/240 (33.33%), Postives = 108/240 (45.00%), Query Frame = 0
Query:   75 RRFPHERGNWPTHVFIPVPNSAAFKSMAEASVSHFRQRLATA----------------------------------WRQGHGRAEGGKGGKKRTRD-------GRQRS----------NQASASSAGKLDPPEVVMNDMDPSGRQHLSLSKTTALRAHQIDPFVRGLKEAVKSSRSFTASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVLNLIAKVDPLMRRFKQSEYYEEPIVHVSVAS 263
            R  PHERG WP+HV I VP SA  + ++ A++ H   RL  A                                  +  G   A GG  G +           GR  S            A+A        P         +G  HLSLS+  ALRAHQ++PF   L+ A   +R+F       Y+VLVN+D+TRSFVCL+V GG   +L LI +V+  +  F+Q  YYE+P +H+SVAS
Sbjct:   24 RAAPHERGRWPSHVHIAVPPSAELRELSAAAIRHLEARLLRAAQAQQAXXXXXXXXXXXXXXXXXXXAPRVIPHDAFAVGGSSANGGGDGLRAXXXXXXXXXGGRGNSCXXXXXXXXXXXAAAXXXXXXXXPRQGXEGEGGAGGVHLSLSRPFALRAHQLEPFAARLRRAAAGARAFRCEVSGAYEVLVNDDRTRSFVCLKVVGGCAPILALIGRVNEALADFQQQTYYEDPKLHISVAS 263          
BLAST of mRNA_Ecto-sp6_S_contig100.758.1 vs. uniprot
Match: A0A4D9D6D2_9STRA (U6 snRNA phosphodiesterase 1 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6D2_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.900e-23
Identity = 77/218 (35.32%), Postives = 116/218 (53.21%), Query Frame = 0
Query:   68 AGNTRWVRRFPHERGNWPTHVFIPVPNSAAFKSMAEASVSHFRQRLATAWRQGHGRAEGGKGGKKRTRDGRQRSNQASASS-------AGKLDPPEV--VMNDMDPSGRQHLSLSKTTALRAHQIDPFVRGLKEAVKSSRSFTASFV------SGYDVLVNEDKTRSFVCLRVR-GGRQMVLNLIAKVDPLMRRFKQSEYYEEPIVHVSVASVLGDVS 269
            A    W+R  PH  GNW THV+I VPN+     MA+A V   R+RL        G  EG +  K+   +       A +S        AG+ +  E   + +D + SG QHLSLS+T  LR++ ++PFV  L +A+  +R+FT           G  +LVN+D++RSFV + V  GG   +  ++  VD ++ +++Q  YY   + H+SVA+V GDVS
Sbjct:  132 ASTVDWIRSVPHFEGNWATHVYITVPNTREVVRMAKACVQEARRRLRNVLGTETGGEEGWQEKKELVENDLNPVPSADSSDEDXXXXGAGEEEGRESRHLPSDQETSG-QHLSLSRTVYLRSYHMEPFVADLGKALAWARAFTFRLAWRRGRGGGEGLLVNDDRSRSFVTVPVEEGGEGRLRQVVESVDEVLVKYRQPPYYRGALFHISVAAVKGDVS 348          
BLAST of mRNA_Ecto-sp6_S_contig100.758.1 vs. uniprot
Match: A0A5D6XW39_9STRA (U6 snRNA phosphodiesterase 1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW39_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.230e-21
Identity = 68/195 (34.87%), Postives = 90/195 (46.15%), Query Frame = 0
Query:   73 WVRRFPHERGNWPTHVFIPV-PNSAAFKSMAEASVSHFRQRLATAWRQGHGRAEGGKGGKKRTRDGRQRSNQASASSAGKLDPPEVVMNDMDPSGRQHLSLSKTTALRAHQIDPFVRGLKEAVKSSRSFTASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVLNLIAKVDPLMRRFKQSEYYEEPIVHVSVASVLG 266
            W+R F H  GNWP+HV + +    A  + +    VS  +Q L T                                         +V  D    G  HLSLS+   LR  QI PFV  L+ A+K  R F  S ++G  VLVN+++TRSF+ LRV  G + VL  +  VD  M+ F    YYE+PI HVS+AS LG
Sbjct:   57 WIRAFAHVEGNWPSHVHVIIGAGDAELRELCGRVVSRAQQELGTRL--------------------------------------ALVPMDSSELGGVHLSLSRPFTLRYEQITPFVLELRAALKWRRRFVLS-LAGATVLVNDERTRSFLALRVADGEREVLATLKCVDACMKHFALPVYYEDPIPHVSIASCLG 212          
BLAST of mRNA_Ecto-sp6_S_contig100.758.1 vs. uniprot
Match: G4YH94_PHYSP (U6 snRNA phosphodiesterase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YH94_PHYSP)

HSP 1 Score: 102 bits (253), Expect = 1.320e-21
Identity = 74/230 (32.17%), Postives = 111/230 (48.26%), Query Frame = 0
Query:   42 SASRHDSLRAATEYDL----ATERRRAKERAGNTRWVRRFPHERGNWPTHVFIPVPNSAAFKSMAEASVSHFRQRLATAWRQGHGRAEGGKGGKKRTRDGRQRSNQASASSAGKLDPPEVVMNDMDPSGRQHLSLSKTTALRAHQIDPFVRGLKEAVKSSRSFTASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVLNLIAKVDPLMRRFKQSEYYEEPIVHVSVASVLGD 267
            S S  D +  +T  +L    AT+    ++R    +W R FPH  GNWP+HV I +P +   + MA+ ++   ++ +                G+  T    +      +SS G               G  HLSLS+   L   QI+ FV  L  A+K  + F+ + + G  VLVN+DKTRSF+ LRV  G Q    ++  VD  +  FKQ  YY++PI HVS+AS +G+
Sbjct:   20 SVSSEDEVEESTSVELSAEVATQIGTKRKRPDEPQWKRAFPHVDGNWPSHVRIDIPVTEELREMAKCAIDRAQELV----------------GENVTLVPFEELRLGESSSTGS-------------GGGLHLSLSRAFILTYDQIEGFVDSLHTALKWRQRFSVT-LEGALVLVNDDKTRSFLALRVSAGAQQFNQVLRCVDQCLACFKQPTYYQDPIPHVSIASSMGE 219          
BLAST of mRNA_Ecto-sp6_S_contig100.758.1 vs. uniprot
Match: A0A2Y9DBP5_TRIMA (U6 snRNA phosphodiesterase n=4 Tax=Afrotheria TaxID=311790 RepID=A0A2Y9DBP5_TRIMA)

HSP 1 Score: 99.8 bits (247), Expect = 1.510e-20
Identity = 84/273 (30.77%), Postives = 120/273 (43.96%), Query Frame = 0
Query:    5 LEAYASSSSDDE-KIGEKDP-KPSVLGG------LPSELLTIFKDSASRHDSLRAATEYDLATERRRAKERAGNTRWVRRFPHERGNWPTHVFIPVPNSAAFKSMAEASVSHFRQRLATAWRQGHGRAEGGKGGKKRTRDGRQRSNQASASSAGKLDPPEVVMNDMDPSGRQHLSLSKTTALRAHQIDPFVRGLKEAVKSSRSF--TASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVLNLIAKVDPLMRRFKQSEYYEEPIVHVSVASVLGD 267
            L  Y+SS S+DE + G + P +P   GG      LPS+ L +     +   S     E D A    R          VR FPHERGNW THV++P      F  + +  + H +  +                                        P  V M +       HLSLS++  LR H I PFV+ LK+ + S + F  TA+ V  Y    N++KTR+FV L V  G    LNL+++VD +M  F  + +Y++P  HVS+A  +GD
Sbjct:    6 LVGYSSSGSEDEAEAGARAPARPGAGGGRRDQTPLPSQRLPVPDSVLNMFPSTEEGPEDDGAKHGGR----------VRTFPHERGNWATHVYVPYEAGEEFLDLLDMLLPHAQTCI----------------------------------------PRLVRMEEF------HLSLSQSVVLRHHWILPFVQALKDRMASFQRFFFTANRVKIY---TNQEKTRTFVGLEVTSGHAQFLNLVSEVDRVMEEFDLTTFYKDPSFHVSLAWCVGD 219          
BLAST of mRNA_Ecto-sp6_S_contig100.758.1 vs. uniprot
Match: A0A8K1FRB5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRB5_PYTOL)

HSP 1 Score: 99.4 bits (246), Expect = 1.750e-20
Identity = 68/201 (33.83%), Postives = 97/201 (48.26%), Query Frame = 0
Query:   68 AGNTRWVRRFPHERGNWPTHVFIPVPNSAAFKSMAEASVSHFRQRLATAWRQGHGRAEGGKGGKKRTRDGRQRSNQASASSAGKLDPPEVVMNDMDPSGRQ-HLSLSKTTALRAHQIDPFVRGLKEAVKSSRSFTASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVLNLIAKVDPLMRRFKQSEYYEEPIVHVSVASVLGD 267
            A + RW R FPH  GNWP+HV I VP +   ++          QR+ TA ++  G                                 EV +  M     + H+SLS+   L   QI+PFV  L+ A+K  R F  + V    VLVN+++TRSF+ L++  G+Q  +  +  VD  M+ F+   YYE+PI HVS+AS LGD
Sbjct:   42 ASSVRWTRAFPHVEGNWPSHVKINVPLTPELQTHC--------QRVITATQRFVG--------------------------------DEVELIPMASEEEELHMSLSRPFVLTYEQIEPFVEALRAALKWRRRFALT-VEEPTVLVNDERTRSFLALQLDAGKQEFVKTVRCVDQCMQDFQLPTYYEDPIPHVSIASALGD 201          
BLAST of mRNA_Ecto-sp6_S_contig100.758.1 vs. uniprot
Match: L5MIK6_MYODS (U6 snRNA phosphodiesterase n=4 Tax=Laurasiatheria TaxID=314145 RepID=L5MIK6_MYODS)

HSP 1 Score: 98.2 bits (243), Expect = 1.820e-20
Identity = 65/196 (33.16%), Postives = 92/196 (46.94%), Query Frame = 0
Query:   74 VRRFPHERGNWPTHVFIPVPNSAAFKSMAEASVSHFRQRLATAWRQGHGRAEGGKGGKKRTRDGRQRSNQASASSAGKLDPPEVVMNDMDPSGRQHLSLSKTTALRAHQIDPFVRGLKEAVKSSRSF--TASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVLNLIAKVDPLMRRFKQSEYYEEPIVHVSVASVLGD 267
            VR FPHERGNW THV++P      F  + +A + H + R+                                         P +V  +       HLSLS++  LR H I PFV+ LKE V S + F  TA  V  Y    NE+KTR+FV L V  G    L+L+++VD +M  F  + +Y++P  H+S+A  +GD
Sbjct:   20 VRTFPHERGNWATHVYVPYEAREEFPDLLDALLPHAQTRV-----------------------------------------PRLVRMEAF-----HLSLSQSVVLRHHWILPFVQALKERVASRQRFCFTADRVKIY---TNEEKTRTFVGLEVTSGHAQFLDLVSEVDRVMEEFDLTTFYKDPSFHISLAWCVGD 166          
BLAST of mRNA_Ecto-sp6_S_contig100.758.1 vs. uniprot
Match: A0A7J7SDP4_MYOMY (U6 snRNA phosphodiesterase n=3 Tax=Myotis TaxID=9434 RepID=A0A7J7SDP4_MYOMY)

HSP 1 Score: 99.0 bits (245), Expect = 2.990e-20
Identity = 75/246 (30.49%), Postives = 105/246 (42.68%), Query Frame = 0
Query:   24 KPSVLGGLPSELLTIFKDSASRHDSLRAATEYDLATERRRAKERAGNTRWVRRFPHERGNWPTHVFIPVPNSAAFKSMAEASVSHFRQRLATAWRQGHGRAEGGKGGKKRTRDGRQRSNQASASSAGKLDPPEVVMNDMDPSGRQHLSLSKTTALRAHQIDPFVRGLKEAVKSSRSF--TASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVLNLIAKVDPLMRRFKQSEYYEEPIVHVSVASVLGD 267
            +P V   LPS+ L +               E D A    R          VR FPHERGNW THV++P      F  + +A + H + R+                                         P +V  +       HLSLS++  LR H I PFV+ LKE V S + F  TA  V  Y    NE+KTR+FV L V  G    L+L+++VD +M  F  + +Y++P  H+S+A  +GD
Sbjct:   35 RPRVQSPLPSQRLPVPDSVLHMFAGTEEGPEDDSAKHGGR----------VRTFPHERGNWATHVYVPYEAREEFPDLLDALLPHAQTRV-----------------------------------------PRLVRMEAF-----HLSLSQSVVLRHHWILPFVQALKERVASRQRFCFTADRVKIY---TNEEKTRTFVGLEVTSGHAQFLDLVSEVDRVMEEFDLTTFYKDPSFHISLAWCVGD 221          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRL4_ECTSI1.040e-16995.74U6 snRNA phosphodiesterase 1 n=1 Tax=Ectocarpus si... [more]
A0A6H5K6W9_9PHAE1.590e-13779.27U6 snRNA phosphodiesterase 1 n=1 Tax=Ectocarpus sp... [more]
A0A836CMF3_9STRA4.560e-2433.33U6 snRNA phosphodiesterase 1 n=1 Tax=Tribonema min... [more]
A0A4D9D6D2_9STRA2.900e-2335.32U6 snRNA phosphodiesterase 1 n=1 Tax=Nannochlorops... [more]
A0A5D6XW39_9STRA1.230e-2134.87U6 snRNA phosphodiesterase 1 n=1 Tax=Pythium brass... [more]
G4YH94_PHYSP1.320e-2132.17U6 snRNA phosphodiesterase n=1 Tax=Phytophthora so... [more]
A0A2Y9DBP5_TRIMA1.510e-2030.77U6 snRNA phosphodiesterase n=4 Tax=Afrotheria TaxI... [more]
A0A8K1FRB5_PYTOL1.750e-2033.83Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
L5MIK6_MYODS1.820e-2033.16U6 snRNA phosphodiesterase n=4 Tax=Laurasiatheria ... [more]
A0A7J7SDP4_MYOMY2.990e-2030.49U6 snRNA phosphodiesterase n=3 Tax=Myotis TaxID=94... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027521U6 snRNA phosphodiesterase Usb1PFAMPF09749HVSLcoord: 65..279
e-value: 7.7E-38
score: 130.3
IPR027521U6 snRNA phosphodiesterase Usb1PANTHERPTHR13522UNCHARACTERIZEDcoord: 1..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:553999..557743 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.758.1mRNA_Ecto-sp6_S_contig100.758.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig100 553986..557743 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig100.758.1 ID=prot_Ecto-sp6_S_contig100.758.1|Name=mRNA_Ecto-sp6_S_contig100.758.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=357bp
MDHLLEAYASSSSDDEKIGEKDPKPSVLGGLPSELLTIFKDSASRHDSLR
AATEYDLATERRRAKERAGNTRWVRRFPHERGNWPTHVFIPVPNSAAFKS
MAEASVSHFRQRLATAWRQGHGRAEGGKGGKKRTRDGRQRSNQASASSAG
KLDPPEVVMNDMDPSGRQHLSLSKTTALRAHQIDPFVRGLKEAVKSSRSF
TASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVLNLIAKVDPLMRRFKQSE
YYEEPIVHVSVASVLGDVSTYVSSSSSSSSSSRIPSSSSSSSSPGKAPPR
ASPPGVVAREARHRAGGGEGTQEDGSSSSDDEEDSSSSSSDDVPSEVCLP
VDVVMCK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027521Usb1