prot_Ecto-sp6_S_contig100.733.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig100.733.1
Unique Nameprot_Ecto-sp6_S_contig100.733.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length903
Homology
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BLAST of mRNA_Ecto-sp6_S_contig100.733.1 vs. uniprot
Match: D7FRN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN6_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 1.780e-80
Identity = 136/150 (90.67%), Postives = 142/150 (94.67%), Query Frame = 0 
Query:  710 GKACTEDTFDVATARNGFSGIRSLQALGLSEEKGCSTPTARGRRCDAWAGNRGGDRGRASHRGAMHVVSAAVATAENGSSSEPRCMRGVHAFLNPGEAATRRAAGSKFLPEEDEKTRDWRDRTPERRPARPPAIKSPMYARRSRSEERNV 859
            GKACTEDTFDVATARNGFSGIRSLQALGLSEEKGCSTPT RGRRCDAWAGNRGGDRG+ASHR AMHVVSAAVATAENGSSSEPRCMRGVHAFLNPGEAATRRAAGSKFLPEEDEKTRDWRDRTPERRPARPPAIKSP+  +R   ++R +
Sbjct:    2 GKACTEDTFDVATARNGFSGIRSLQALGLSEEKGCSTPTPRGRRCDAWAGNRGGDRGQASHRAAMHVVSAAVATAENGSSSEPRCMRGVHAFLNPGEAATRRAAGSKFLPEEDEKTRDWRDRTPERRPARPPAIKSPIGEKRVGQKDRTM 151
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRN6_ECTSI1.780e-8090.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 460..480
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 492..502

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:353646..360465 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.733.1mRNA_Ecto-sp6_S_contig100.733.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig100 353646..360465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig100.733.1 ID=prot_Ecto-sp6_S_contig100.733.1|Name=mRNA_Ecto-sp6_S_contig100.733.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=903bp
MSGLRGTRRRGDPPPRSAPVFLTAIEAQAVVNSETTALRALLLPDYDGVA
VAFAGLLVKVIQRCKREDQVDGRVLHACEALGLYEGRPVSVEMLARRLRR
FGLAWHGFTTEECQAFICDELDTDEDGQVRVQDIFAFLRSFWVQQARRAL
ARPHQSLTLGGDRSCRGGYIRRGTRRQAAVEAGMFATRKFPRGLQQKLRA
AAGRARLCGVDVLKALQGAASPSPRCCRCAGDVKGSSSLGVEATARFLRS
IGVGFDSHHASVSANRGFGERLSHPRGEADARGEADARGEADLGESRDVR
AYVRPGEPFPSEEERVVHVPSSSTQRDRWSGDDLQNRCQAGEATRAEPWW
AQGDVFLASHDQCEGRVAEAQSRQTRGRDGVRTTRLRPSETTARIERGWS
TPSESPKLPSRLNRVMHGGGASGCCDEGARSGRECAVGAADGVGDEEARE
DIGTCNSQRLRRAAKDLKRMQSEYLVLQRQVRGETTDKPSTPPPPPPPPP
PPPTTAEVANLDDSIEHHCRDDTAAAAAATGRRSSHNTLLRPTSFFPGHP
NPKNNGAHHYYFSTAVQQQHQHQHQHQHQHQHQHQHQQKQKKPWLGYEGG
DGVAQREWGAEDGSDDSGGGDDGNGRRCRDRRKEEGSFFRPPPLVMRPKS
SSSSSNAFDNSGITAVRYQYHTAHADCSEAARQNGWVTNWPRLAPDTRRC
RALLLMAAQGKACTEDTFDVATARNGFSGIRSLQALGLSEEKGCSTPTAR
GRRCDAWAGNRGGDRGRASHRGAMHVVSAAVATAENGSSSEPRCMRGVHA
FLNPGEAATRRAAGSKFLPEEDEKTRDWRDRTPERRPARPPAIKSPMYAR
RSRSEERNVWDKRTGRWARSTSKGRSAARIRGRSVDNPCNVRTMSGRDLR
CF*
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