prot_Ecto-sp6_S_contig100.728.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig100.728.1
Unique Nameprot_Ecto-sp6_S_contig100.728.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length586
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A6H5L0P4_9PHAE (Swi3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0P4_9PHAE)

HSP 1 Score: 835 bits (2157), Expect = 3.690e-300
Identity = 511/591 (86.46%), Postives = 531/591 (89.85%), Query Frame = 0
Query:    1 MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGSEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRAEEREDEELAGSRYAMEVDGDGGDEGKSDRQVAAEGSAAAMSDQVRQRIEANRRLALDRLRLKK-QXXXXXXXXXXXXXXXXXXGGAVAVPAANDGSREVEDLEEDLMDVDGGGGPGDSFDDDEAALADMEAEEMAARPVAAEALRGKNTVAEPGPAAVVTSPPSTLAVESEETAGALDEEQASPERTIREDEAMEDAGSGASCANTAAAVVADDANDPAPVSAAADGVARGGARAAGAGCAGSVDEASAKCAVAAARGGEPGTTAGEESGGELPPASEPGAPAPGVGGGRERDGANDEAASLGTTAAXXXXGA--NGITGGAKLDDAVLGGGDXXXXAPEPVAANGDEEGASFSSPAKCK---AAASGLPLSPLGSLFAGTDVSAEGGLAVARKPLGGLFSDENV 585
            MSESEEERRPRPIGVADGS EDSGMERTDAAGANNG+EPG DSTGVAAPEE TTAKKVSNRPPAFSENHLVKEKGLWQ+YKDFPQKC+Y GRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKL GRARTRSL+RELRDTERDRVLEAK+GREAVDDVH+QEAARLAAKESKTAAAEGDRAEEREDEE AGSRY MEVDGDGGDEGKSDRQVAAEGSAAAMS+QVRQRIEANRRLALDRLR KK +    XXXXXXXXXXXXXX       AANDGSREVEDLEEDLMDVDGGGGPGD FDDDEAALADME E+MAARPVAAEA R KNTVAEPGPA V TSP STLAVES+ETAGA+DEE A PE +IREDEAMED GS AS ANTAAAVVADDA DPAPVSAAADGVARGGARAAGAGCAG+VDEA A  A  AA GGEP  TAGEESGGELPPASEPG P PGVGGG++RDGANDEAASL T  AXXXX    +GITGGAK+DDAVL    XXXXAPEPVAA GDEEGASFSSPAKC+   AAASGLPLSPLG+LFAGTDVSAEGGLAV R+PLGGLFSDENV
Sbjct:    1 MSESEEERRPRPIGVADGSGEDSGMERTDAAGANNGTEPGLDSTGVAAPEEVTTAKKVSNRPPAFSENHLVKEKGLWQVYKDFPQKCRYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLAGRARTRSLMRELRDTERDRVLEAKFGREAVDDVHSQEAARLAAKESKTAAAEGDRAEEREDEEFAGSRYTMEVDGDGGDEGKSDRQVAAEGSAAAMSEQVRQRIEANRRLALDRLRSKKHEASVAXXXXXXXXXXXXXXXXXXXXXAANDGSREVEDLEEDLMDVDGGGGPGDGFDDDEAALADMETEQMAARPVAAEASRRKNTVAEPGPAVVSTSPASTLAVESDETAGAVDEELAPPEPSIREDEAMEDTGSRASGANTAAAVVADDAKDPAPVSAAADGVARGGARAAGAGCAGNVDEAPATWAADAAGGGEPDATAGEESGGELPPASEPGTPGPGVGGGQDRDGANDEAASLRTMTAXXXXXXXXDGITGGAKVDDAVLXXXXXXXXAPEPVAAKGDEEGASFSSPAKCRSATAAASGLPLSPLGTLFAGTDVSAEGGLAVVREPLGGLFSDENV 591          
BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: D7FKE8_ECTSI (Swi3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE8_ECTSI)

HSP 1 Score: 767 bits (1980), Expect = 2.670e-274
Identity = 480/589 (81.49%), Postives = 483/589 (82.00%), Query Frame = 0
Query:    1 MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGSEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRAEEREDEELAGSRYAMEVDGDGGDEGKSDRQVAAEGSAAAMSDQVRQRIEANRRLALDRLRLKKQXXXXXXXXXXXXXXXXXXGGAVAVPAANDGSREVEDLEEDLMDVDGGGGPGDSFDDDEAALADMEAEEMAARPVAAEALRGKNTVAEPGPAAVVTSPPSTLAVESEETAGALDEEQASPERTIREDEAMEDAGSGASCANTAAAVVADDANDPAPVSAAADGVARGGARAAGAGCAGSVDEASAKCAVAAARGGEPGTTAGEESGGELPPASEPGAPAPGVGGGRERDGANDEAASLGTTAAXXXXGANGITGGAKLDDAVLGGGDXXXXAPEPVAANGDEEGASFSSPAKCKAA----ASGLPLSPLGSLFAGTDVSAEGGLAVARKPLGGLFSDENV 585
            MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGSEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQY GRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLA RTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDR EEREDEELAGSRYAMEVDGDGGDEGKSDRQVAAEGSAA MSDQVRQRIEANRRLALDRLRLKKQ XXXXXXXXXXXXXXXXX         NDGSREVED EEDLMDVDGGGGPGDSFDDDEAALADMEAEEMAARPVAAEA RGKNTVAEPGPAAVVTSPPSTLAVE                                                              GARAAGAGCAGSVDEASAKCAVAAAR GEPGTTAGEESGGELPPASEP APAPGVGGGRERDGANDEAASLGTTAA    GA+GITGGAKLDDAVLG   XXXX             ASFSSPAKC+      ASGLPLSPLGSLFAGTDVSAEGGLAVAR+PLGGLFSDENV
Sbjct:    1 MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGSEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLACRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRVEEREDEELAGSRYAMEVDGDGGDEGKSDRQVAAEGSAATMSDQVRQRIEANRRLALDRLRLKKQEXXXXXXXXXXXXXXXXX---XXXXXXNDGSREVEDPEEDLMDVDGGGGPGDSFDDDEAALADMEAEEMAARPVAAEASRGKNTVAEPGPAAVVTSPPSTLAVER-------------------------------------------------------------GARAAGAGCAGSVDEASAKCAVAAARSGEPGTTAGEESGGELPPASEPSAPAPGVGGGRERDGANDEAASLGTTAAASAAGADGITGGAKLDDAVLGXXXXXXXXXXXXXXXXXXXXASFSSPAKCRXXXXXXASGLPLSPLGSLFAGTDVSAEGGLAVAREPLGGLFSDENV 525          
BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A836CM34_9STRA (Swi3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM34_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.120e-22
Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 0
Query:   50 EEATTAKK-VSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVD 161
            EE   AKK    R P FSE  LV+ KGL +I  DFP++ +   +G+E EFL  LM  YKEWGYQLYP +AFEDLA R E LGG+ R R  L  +RD ERDR + A++G++AV+
Sbjct:   52 EEGKPAKKPAKRRAPPFSEVQLVEGKGLMKIRDDFPKRLKPCVKGKEREFLSRLMFLYKEWGYQLYPSLAFEDLAVRIETLGGKERVRGHLAMMRDEERDRCVRARHGKDAVE 164          
BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A397E7Y0_9STRA (Swi3 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E7Y0_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.780e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 0
Query:   57 KVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNG---RGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDR 149
            KV+ +   FSE HL+  +GL  +Y  FP    +N     G E E LR L+ AYKEW Y+LYPG+ FEDL  +TE L  +A   S + +LR  ER R
Sbjct:   48 KVTKKRATFSEQHLLGPRGLSLVYSTFP--THFNRAVTHGNEGEALRELITAYKEWAYELYPGLNFEDLVDKTEALAKKAAVSSFIADLRQQERKR 141          
BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A397BHD7_9STRA (Swi3 domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BHD7_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 4.750e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 0
Query:   57 KVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNG---RGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDR 149
            KV+ +   FSE HL+  +GL  +Y  FP    +N     G E E LR L+ AYKEW Y+LYPG+ FEDL  +TE L  +A   S + +LR  ER R
Sbjct:   48 KVTKKRATFSEQHLLGPRGLSLVYSTFP--THFNRAVTHGNEGEALRELITAYKEWAYELYPGLNFEDLVDKTEALAKKAAVSSFIADLRQQERKR 141          
BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A482SX14_9ARCH (Swi3 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SX14_9ARCH)

HSP 1 Score: 77.4 bits (189), Expect = 5.790e-13
Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 0
Query:   56 KKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDR 149
            KK  N  P F E  LV   GL +IY +FP + +Y  + +E +FLR L+  YKEW +QL+PG++FED   +   L  ++R RS + ELRD ER R
Sbjct:   59 KKAKNAKP-FDEALLVGPHGLSRIYHEFPLRIRYQ-KNQEVQFLRQLLSLYKEWAFQLHPGLSFEDAILKISTLSHKSRVRSAVTELRDLERIR 150          
BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: M4BUG3_HYAAE (Swi3 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUG3_HYAAE)

HSP 1 Score: 76.6 bits (187), Expect = 9.530e-13
Identity = 38/110 (34.55%), Postives = 60/110 (54.55%), Query Frame = 0
Query:   52 ATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVD 161
            A++      R     E+HL+  +G  ++Y+ FP +      GREA  L  L+  YK+W Y LYPG+ FED   RTE L    + + L+ E+R+ ER + +E + G++  D
Sbjct:   39 ASSTPSKKRRRNLLRESHLLSAEGFKKVYRTFPYQVSSTVSGREAPALASLIKMYKQWAYDLYPGLNFEDFVDRTETLAKGHQVQGLMAEMREKERRKRVERRCGKDEED 148          
BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A6A3STA2_9STRA (Swi3 domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3STA2_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 9.750e-13
Identity = 36/95 (37.89%), Postives = 56/95 (58.95%), Query Frame = 0
Query:   58 VSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLE 152
            V  R     E+HLV  +GL ++++ FP +   +  GREA+ L  L+  YK+W + LYPG+ FED   R E LG   + + L+ +LR+ E+ + LE
Sbjct:    7 VQRRRNLLRESHLVSAEGLKKVHRTFPYQVSADVSGREAQALASLIKMYKQWAFDLYPGLNFEDFVERAEALGKSHQVQGLVADLREKEKLKALE 101          
BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A6G0QIQ9_9STRA (Swi3 domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0QIQ9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.390e-12
Identity = 45/123 (36.59%), Postives = 67/123 (54.47%), Query Frame = 0
Query:   30 AAGANNGSEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLE 152
            AAGA  GS+   D    AA     T +    R     E+HLV  +GL ++++ FP +   +  GREA+ L  L+  YK+W + LYPG+ FED   R E LG   + + L+ +LR+ E+ + LE
Sbjct:   22 AAGATAGSQDAVDDLVTAAAASVPTKR----RRNLLRESHLVSAEGLKKVHRTFPYQVSADVSGREAQALASLIKMYKQWAFDLYPGLNFEDFVERAEALGKSHQVQGLVADLREKEKLKALE 140          
BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A3R6ZL68_9STRA (Swi3 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZL68_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.490e-12
Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 0
Query:   57 KVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNG---RGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDR 149
            K   +   FSE HL+  KG   +Y  FP    +NG    G E+E LR L+ AYKEW Y+LYPG+ FEDL  RTE +  +A   S L +LR  ER R
Sbjct:   49 KAKKKRATFSEQHLLGPKGFSLVYSSFP--THFNGAVTNGNESEALRELITAYKEWAYELYPGLNFEDLVDRTEIIAKKATVSSYLSDLRQQERKR 142          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0P4_9PHAE3.690e-30086.46Swi3 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FKE8_ECTSI2.670e-27481.49Swi3 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CM34_9STRA2.120e-2253.10Swi3 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A397E7Y0_9STRA1.780e-1344.79Swi3 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A397BHD7_9STRA4.750e-1344.79Swi3 domain-containing protein n=5 Tax=Aphanomyces... [more]
A0A482SX14_9ARCH5.790e-1344.68Swi3 domain-containing protein n=1 Tax=archaeon Ta... [more]
M4BUG3_HYAAE9.530e-1334.55Swi3 domain-containing protein n=1 Tax=Hyaloperono... [more]
A0A6A3STA2_9STRA9.750e-1337.89Swi3 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A6G0QIQ9_9STRA1.390e-1236.59Swi3 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A3R6ZL68_9STRA1.490e-1245.83Swi3 domain-containing protein n=1 Tax=Aphanomyces... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012923Chromosome segregation in meiosis protein 3PFAMPF07962Swi3coord: 66..146
e-value: 1.1E-17
score: 63.8
IPR040038TIPIN/Csm3/Swi3PANTHERPTHR13220TIMELESS INTERACTING-RELATEDcoord: 29..261
NoneNo IPR availablePRODOMPD089639coord: 27..132
e-value: 2.0E-7
score: 137.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:324448..326703 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.728.1mRNA_Ecto-sp6_S_contig100.728.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig100 324448..326703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig100.728.1 ID=prot_Ecto-sp6_S_contig100.728.1|Name=mRNA_Ecto-sp6_S_contig100.728.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=586bp
MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGSEPGRDSTGVAAPE
EATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLR
GLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRV
LEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRAEEREDEELAGSRYA
MEVDGDGGDEGKSDRQVAAEGSAAAMSDQVRQRIEANRRLALDRLRLKKQ
EAAAAAAAAALVAEKENDGGAVAVPAANDGSREVEDLEEDLMDVDGGGGP
GDSFDDDEAALADMEAEEMAARPVAAEALRGKNTVAEPGPAAVVTSPPST
LAVESEETAGALDEEQASPERTIREDEAMEDAGSGASCANTAAAVVADDA
NDPAPVSAAADGVARGGARAAGAGCAGSVDEASAKCAVAAARGGEPGTTA
GEESGGELPPASEPGAPAPGVGGGRERDGANDEAASLGTTAAAAGAGANG
ITGGAKLDDAVLGGGDGGGGAPEPVAANGDEEGASFSSPAKCKAAASGLP
LSPLGSLFAGTDVSAEGGLAVARKPLGGLFSDENV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012923Csm3
IPR040038TIPIN/Csm3/Swi3