Homology
BLAST of mRNA_Ecto-sp6_S_contig100.708.1 vs. uniprot
Match:
D7FKG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG8_ECTSI)
HSP 1 Score: 1147 bits (2968), Expect = 0.000e+0
Identity = 579/596 (97.15%), Postives = 584/596 (97.99%), Query Frame = 1
Query: 40 MVSDLPPYANSKTTVRYDGDVQDARQVDGKIWFAVDGQAILTREQQTRGISKLRPGTGTTAYTMASAHVIVGGPQPSSSYGADPAGGGTASGLLSPESALLIKAAQISQTFAAVTALPPGIHVMCYVPPSTDDADEKPAAGDAGGKPAATAGDWSALWRDIRFSTGEAEEGKRLAWQAPCLSLLGDATSFLASAAISSLTDSTPRGGWALVPCASSSNLVCELASGGAKGDGGKVAWLHLAEDAQASGTGVAVADSLLLTSDGNQELSYASVSARSLGDAEVEVVSEAHRVLPGGVLSGYDLSVAPPNNALLGNDKSSDEEPDRGRPKNVDEAAVFVDHSTAPVDVVGQRWRGDVAVVGLPGGGLHRHVRVKFDARCTGNACEGLSERGESQDSDTSEWCEVLLAQHVPQGAYIDVDEVKARHDFDVLSSPPIGRRVGVETFEGEPIDVELPSSVSGQHLVNFNLWFDMSRGDRGREGEARSIQADVTLPVHLRYPDPGCERRGEECEGYAWVEVPPPLASIRCGSAGNMGQFSPVLPARPPVGVALRVPRGIAWHRDLVMMGTAGAAALGCLYTIYTLLVVVPTGKARGSDRKSR 1827
MVSDLPPYANSKTTVRYDGDVQDARQVDGKIWFAVDGQAILTREQQTRGISKLRP GTTA+TMASAHVIVGGPQ SSSY ADPAGGGTASGLLSPESALLIKAAQ+SQTFAAVTALPPGIHVMCYVPPSTDDADEKPAAGDAGGKPAATAGDWSALWRDIRFSTGEAEEGKRLAWQAPCLSLLGDATSFLASAAISSLTDSTPRGGWALVPCASSSNLVCELASGGAKGDGGKVAWLHLAEDAQASGTGVAVADSLLLTSDGNQELSYASVSARSLGDAEVEVVSEAHRVLPGGVLSGYDLSVAPPNNAL+GNDKSSD EPDRGRPKNVDEAAVFVDHSTAPVDVVGQRWRGDVAVVGLPGGGLHRHVRVKFDARCTGNACEGLSERGESQDSD SEWCEVLLAQHVPQGAYIDVDEVKARHDFDVLSSPP+GRRVGVETFEG PIDVELPSSVSGQHLVNFNLW DMS DRGREGEARSIQAD+TLPVHLRYPDPGCERRGEECEGYAWVEVPPPLASIRCGSAGNMGQF PVLPARPPVGVALRVPRGIAWHRDLVMMGT GAAALGCLYTIYTLLVVVPTGKARGSDRKSR
Sbjct: 1 MVSDLPPYANSKTTVRYDGDVQDARQVDGKIWFAVDGQAILTREQQTRGISKLRPAPGTTAHTMASAHVIVGGPQLSSSYDADPAGGGTASGLLSPESALLIKAAQVSQTFAAVTALPPGIHVMCYVPPSTDDADEKPAAGDAGGKPAATAGDWSALWRDIRFSTGEAEEGKRLAWQAPCLSLLGDATSFLASAAISSLTDSTPRGGWALVPCASSSNLVCELASGGAKGDGGKVAWLHLAEDAQASGTGVAVADSLLLTSDGNQELSYASVSARSLGDAEVEVVSEAHRVLPGGVLSGYDLSVAPPNNALIGNDKSSDGEPDRGRPKNVDEAAVFVDHSTAPVDVVGQRWRGDVAVVGLPGGGLHRHVRVKFDARCTGNACEGLSERGESQDSDASEWCEVLLAQHVPQGAYIDVDEVKARHDFDVLSSPPVGRRVGVETFEGGPIDVELPSSVSGQHLVNFNLWVDMSERDRGREGEARSIQADLTLPVHLRYPDPGCERRGEECEGYAWVEVPPPLASIRCGSAGNMGQFFPVLPARPPVGVALRVPRGIAWHRDLVMMGTTGAAALGCLYTIYTLLVVVPTGKARGSDRKSR 596
BLAST of mRNA_Ecto-sp6_S_contig100.708.1 vs. uniprot
Match:
A0A6H5L0R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0R2_9PHAE)
HSP 1 Score: 820 bits (2117), Expect = 6.230e-294
Identity = 436/588 (74.15%), Postives = 457/588 (77.72%), Query Frame = 1
Query: 40 MVSDLPPYANSKTTVRYDGDVQDARQVDGKIWFAVDGQAILTREQQTRGISKLRPGTGTTAYTMASAHVIVGGPQPSSSYGADPAGGGTASGLLSPESALLIKAAQISQTFAAVTALPPGIHVMCYVPPSTDDADEKPAAGDAGGKPAATAGDWSALWRDIRFSTGEAEEGKRLAWQAPCLSLLGDATSFLASAAISSLTDSTPRGGWALVPCASSSNLVCELASGGAKGDGGKVAWLHLAEDAQASGTGVAVADSLLLTSDGNQELSYASVSARSLGDAEVEVVSEAHRVLPGGVLSGYDLSVAPPNNALLGNDKSSDEEPDRGRPKNVDEAAVFVDHSTAPVDVVGQRWRGDVAVVGLPGGGLHRHVR-------------------------------------------------------------------------VKFDARCTGNACEGLSERGESQDSDTSEWCEVLLAQHVPQGAYIDVDEVKARHDFDVLSSPPIGRRVGVETFEGEPIDVELPSSVSGQHLVNFNLWFDMSRGDRGREGEARSIQADVTLPVHLRYPDPGCERRGEECEGYAWVEV 1584
M SDLPP+ANSKTT+ YDGDVQDARQ+DGKIWFAVDGQAILTREQQTRGIS+LRP +GTTA+TMASAHV+ GG QPSSSY ADPAGGGTASGL SPESALL+KAAQ+SQTFAAVTALPPGIHVMCYVPPSTDDADEKPAA DAGGKP ATAG WSALWRDIR TG+AEE KRLAWQ PCLSLLGDA S L+SAAISSL DS RGGWALVPCASSSNLVCELASGGAKGDGG+VAWLHLAEDAQA TGVAV DSLLLT SLG AEVEV+SEAHR+L GVLSGYDLSVAPPNNALLGN KSSD EPDRGRP VDEAAVFVDHSTAP DVVGQRWRGDVAVVGLPGGGLHRHVR VKF+ARCTG AC+ LSERGESQD D E CEVLLAQHVP+GAYIDVDEVKARHDFDVLSSPPIGRRVGVETF+G PIDVELPSSVSGQHLVNFNLW DMS DRG EGEA SIQAD+TLPVHLRYPDPGC+RRGEECEGYAWV+
Sbjct: 1 MASDLPPHANSKTTLLYDGDVQDARQIDGKIWFAVDGQAILTREQQTRGISQLRPASGTTAHTMASAHVVAGGLQPSSSYDADPAGGGTASGLSSPESALLMKAAQVSQTFAAVTALPPGIHVMCYVPPSTDDADEKPAAVDAGGKPVATAGGWSALWRDIRSGTGQAEEAKRLAWQTPCLSLLGDAASSLSSAAISSLADSASRGGWALVPCASSSNLVCELASGGAKGDGGQVAWLHLAEDAQAPATGVAVTDSLLLT---------------SLGGAEVEVISEAHRILLDGVLSGYDLSVAPPNNALLGNVKSSDGEPDRGRPMKVDEAAVFVDHSTAPADVVGQRWRGDVAVVGLPGGGLHRHVRYSFCRASTIVLSAHHSHDRLSAIMKKDARTGRGCCERAELIGDGKIGTWLPLCGDLQIMSAGGFHKHGSQRVRVKFNARCTGKACDDLSERGESQDGDALELCEVLLAQHVPRGAYIDVDEVKARHDFDVLSSPPIGRRVGVETFQGGPIDVELPSSVSGQHLVNFNLWVDMSERDRGLEGEASSIQADLTLPVHLRYPDPGCDRRGEECEGYAWVKA 573
BLAST of mRNA_Ecto-sp6_S_contig100.708.1 vs. uniprot
Match:
UPI00142591A5 (phosphatidylinositol-glycan biosynthesis class X protein-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142591A5)
HSP 1 Score: 72.0 bits (175), Expect = 3.720e-10
Identity = 59/240 (24.58%), Postives = 94/240 (39.17%), Query Frame = 1
Query: 1129 GLHRHVRVKFDARCTGNACEGLSERGESQDSDTSEWCEVLLAQHVPQGAYIDVDEVKARHDFDVLSSPPIGRRVGVETFEGEPIDVELPSSVSGQHLVNFNLWFDMSRGDRGREGEARSIQADVTLPVHLRYPDPGCERRGEECEGYAWVEVPPPLASIRCGSAGNMGQFS-----------------------PVLPARPPVGVALRVPRGIAWHRDLVMMGTAGAAALGCLYTIYTLL 1779
G HR++ K + + SQD + S C +L+ H+P GA++D+D+++ R +F G + E IDVE P +S H + +S + + + + P+HLRY P +A V + PP +RC S + G+ S +L V L+VP G +V++GT +G LY IY LL
Sbjct: 72 GFHRYLETKVQLQLS------------SQDFENSLTCHILMIDHLPSGAFVDLDQLENRLEFG-----------GPQVLALEHIDVEKPQYLSSGHSI-------LSFQTKVFPPTSSNFNIETAFPIHLRYHRPS----NHPTVNFANVTIHPPDMMVRCDS--DHGELSHQKLDTRIILGLCTAMKKNLCHWQLLQRNESASVILQVPVGQHSDTVVVLLGTVACVFVGVLYLIYILL 275
BLAST of mRNA_Ecto-sp6_S_contig100.708.1 vs. uniprot
Match:
A0A7S2XXY9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXY9_9STRA)
HSP 1 Score: 60.5 bits (145), Expect = 3.710e-6
Identity = 57/195 (29.23%), Postives = 84/195 (43.08%), Query Frame = 1
Query: 1237 CEVLLAQHVPQGAYIDVDEVKARHDFDV-----LSSPPIGRRVGVETFEGEPIDVELPSSVSGQHLVNFNLWFDMSRGDRGREGEARSIQADVTLPVHLRYPDPGCERRGEECEGYAWVE--VPPPLASIRCGSAGN---MGQFS--PV--LPARPPVGVALRVPRGIAWHRDLVMMGTAGAAALGCLYTIYTLL 1779
C +LL +P+GAY+D++E+K H+++V + +PP E ID+E P++ L + + G E S + LPVHLRYP P EG VE + PP+ I GN + Q S PV LP + V L VP G V+ T + +GC+ L+
Sbjct: 157 CSILLLLDIPKGAYVDLEEMKHSHEYNVKGQVKVMAPP------------EVIDIEAPATSKKARHHTIALKYVTHALNSGLEFFVASA---IRLPVHLRYPAP--------TEGGRPVETLLHPPVVYISTLDYGNDRALPQVSSHPVAQLPFKKQPPVILLVPSGQKELTTFVITITVAVSVIGCIVLFVYLI 328
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.708.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 4
0 1 Expect = 0.00e+0 / Id = 97.15 Expect = 6.23e-294 / Id = 74.15 Expect = 3.72e-10 / Id = 24.58 Expect = 3.71e-6 / Id = 29.23 Sequence D7FKG8_ECTSI A0A6H5L0R2_9PHAE UPI00142591A5 A0A7S2XXY9_9STRA back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 0 Model size 1832 Hectar predicted targeting category other localisation Exons 6 Ec32 ortholog description conserved unknown protein Ec32 ortholog Ec-12_002130.1 Cds size 1830
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348722.1869802-CDS-Ecto-sp6_S_contig100:185114..185363 1682348722.1869802-CDS-Ecto-sp6_S_contig100:185114..185363 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 185115..185363 - 1682348722.1948252-CDS-Ecto-sp6_S_contig100:185552..185834 1682348722.1948252-CDS-Ecto-sp6_S_contig100:185552..185834 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 185553..185834 - 1682348722.201945-CDS-Ecto-sp6_S_contig100:186294..186450 1682348722.201945-CDS-Ecto-sp6_S_contig100:186294..186450 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 186295..186450 - 1682348722.2091837-CDS-Ecto-sp6_S_contig100:186844..187166 1682348722.2091837-CDS-Ecto-sp6_S_contig100:186844..187166 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 186845..187166 - 1682348722.2165797-CDS-Ecto-sp6_S_contig100:187573..188190 1682348722.2165797-CDS-Ecto-sp6_S_contig100:187573..188190 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 187574..188190 - 1682348722.225133-CDS-Ecto-sp6_S_contig100:188454..188658 1682348722.225133-CDS-Ecto-sp6_S_contig100:188454..188658 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 188455..188658 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.708.1
>prot_Ecto-sp6_S_contig100.708.1 ID=prot_Ecto-sp6_S_contig100.708.1|Name=mRNA_Ecto-sp6_S_contig100.708.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=610bp
KSEVALDHSVHSTMVSDLPPYANSKTTVRYDGDVQDARQVDGKIWFAVDG back to top mRNA from alignment at Ecto-sp6_S_contig100:185115..188658-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.708.1 ID=mRNA_Ecto-sp6_S_contig100.708.1|Name=mRNA_Ecto-sp6_S_contig100.708.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3544bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:185115..188658- (Ectocarpus species6 EcLAC_371)AAGTCAGAAGTAGCACTCGACCACAGCGTGCACTCGACCATGGTCTCCGA
CCTTCCGCCATACGCCAACTCGAAGACTACCGTTCGGTATGACGGAGACG
TACAAGATGCTCGTCAAGTAGATGGGAAAATCTGGTTTGCTGTTGATGGA
CAAGCAATCCTCACACGAGAGCAACAGACGCGGGGTATCTCGAAACTCAG
GCCG GTGAGCCCAGGATGCCCACTACGTTGAGCTCCCCTGTCCCATCTCC
TTCCAGCAATGAAGCCCACACTCGCAATCTAGAAGGTGTCAGGAGATACT
TTGCCCTTGGACAAAGCCTCTTCGCTGCGAGCGAAGAGCAGTAGGCTGCA
GAGCACCGCCGTGTGGGACATGAGAAGGTAGCGCAGCAGCGCATCCATGC
TACGGCAGTACTGCTGTACACGCTCCGCACCAACGGCCACTCGCACGCAT
CTCTTCCTTGATACGCAGGGGACGGGTACGACCGCCTATACCATGGCATC
AGCTCACGTCATTGTTGGCGGGCCACAACCTAGCAGCAGCTATGGTGCCG
ATCCAGCAGGCGGAGGAACTGCATCTGGACTGTTATCTCCCGAATCTGCT
CTGCTCATTAAAGCAGCGCAAATCAGCCAAACCTTCGCTGCGGTGACGGC
GCTGCCACCGGGCATCCATGTAATGTGTTACGTGCCGCCTTCAACTGACG
ACGCTGACGAGAAGCCGGCAGCTGGTGACGCTGGCGGGAAACCGGCGGCA
ACGGCCGGTGATTGGTCCGCCCTGTGGCGCGACATCCGGTTCAGTACCGG
TGAGGCGGAAGAAGGCAAGCGATTGGCATGGCAAGCACCGTGCCTGAGCC
TGCTGGGCGATGCGACAAGCTTCCTCGCATCCGCGGCGATCTCGTCCCTC
ACTGACAGCACACCGCGTGGGGGGTGGGCCCTTGTGCCGTGCGCATCATC
CAGTAACTTGGTCTGTGAGTTGGCGAGCGGCGGGGCAAAAGGAGATGGCG
GGAAGGTGGCGTGGTTGCATCTTGCGGAGGACGCGCAGGCTTCTGGTACC
GGTGTCGCCGTGGCCGACAGTCTTCTTCTCACGTC GTGAGTTTTGGTTGA
GATAGAGAGAAAGTTTCGCGCGCAGCCTACAGCAACCTTGTCGGACATTT
TATATCATGTGCGTGTTTCCACGCCAGCAACCGTTTTCATCGTCCGCCGC
AACGGCGAATCCTGCCGTCGTACGGGCCTCGTCATGCCTTTATGCCGCAT
GTCGCACATGGCAGTGCACCCGGCATGATTGCTACCCGTAGCCCATCCTC
GTACGAAGTTACTGCCGTCTACCGGTTTGTGAACACCTCGACAAAAGTTA
CGACTACACCAGCTGTGATTCGTTCACAAGAGTGAACGCGCATCTGCCCA
GCTGTGACGACAAAGTTCTTGGAAGCATGTTCAACCTTGAAGTATCGAGC
TTTCGCGTTCGCCCTGCCCTCCGACGCACGCCCGCCGATCAGCGATGGTA
ATCAAGAGTTGTCCTACGCGTCAGTCTCGGCACGCAGCCTAGGCGACGCC
GAGGTGGAGGTAGTCTCGGAGGCCCATCGCGTCTTGCCCGGCGGCGTTCT
CTCCGGCTACGACTTGAGCGTCGCGCCACCGAACAACGCACTCCTAGGGA
ACGATAAGTCATCAGACGAAGAACCTGATAGGGGAAGGCCGAAGAACGTG
GACGAGGCTGCTGTGTTTGTGGACCACTCCACGGCCCCGGTCGACGTTGT
CGGACAACGCTGGCGAGGGGATGTTGCGGTGGTGGGGCTCCCGGGAGGGG
GGCTACACAGACAT GTGCGATATTCCTTTTGCAGAGCATCCGCAATGGTG
CTCTCTGCTCACCATAGTCACGATCGTTTGTCGGCGATCATGAGAAAAGA
TGCCGGTACTGTAAAGAGCTGCAACGAAAGGGCAGAGCTGATTGGGGATG
GAGGGGCATTTGGTGGCGCCGTACTCCATTGTTCTTTTACCCTGTTTCAG
CACAGATAGGCACATCGCTGCCGTTGTGCGGAGATCTTCAGATCATGTCT
GCTGGTGGATTCCACAAGCAAGGCAGCGAGAGGGTAATTGCCACTTTTTA
TAGCGCGTTTGCCGGCAAGCTCTCCACTACACCCATCTTTCAAGCACCAA
ATCCAGGCTTTTACACCGTGCGCGTGTTTCCGTGTCTTGTGAACTGCCTC
TTGAACAGGTGAGAGTCAAGTTTGACGCTAGGTGCACAGGGAACGCTTGC
GAGGGTCTCTCGGAAAGAGGGGAATCGCAAGATAGCGACACCTCGGAGTG
GTGCGAGGTGTTGCTTGCGCAGCACGTCCCGCAAGGAGCTTATATCGACG
TTGACGAGGTCAAG GTGAGAAAAAAGAAAATTACGGGTTGTTGGTCTTGT
CGGCCTTGTGTGTGCGAATTATCACGTTGCGTTTGAAGCTCGAAGCAGAA
TACATGGCCAGGAGCATGACGTTGCCGTTGCAATGGAATCATGCACTCGC
AGAACGATGTGTGTCTAATGTCTCGTATCTAGCGTCCGCTTTTTTTTACA
TACTGCTTGAAACAAAGGTTAACTATGTAACCGTCACCAGTGGCAGACAA
GAGATGTGCGTGCTATTGCCGTCACTGCCCGTAGTTGATGATCGTTGGAT
TGGCCTCTTGATCCAGCCACTCACAAACACTCCACGCGTAAGACCAGGCA
CGTCGGTACTCAAACCGTCCAGACACATGGCACCACCCGATCCTGACGGT
GTAACCGACACCATGATGTTTATGTCAGGACTGCTGTGTCTTCTGCCTGT
GTTTTTGCATTGCTGCAACGACAGGCACGCCACGATTTCGACGTTCTTTC
TTCGCCCCCGATAGGGCGGAGAGTAGGCGTGGAGACCTTTGAGGGCGAGC
CGATCGATGTCGAGCTACCCTCGTCGGTCTCGGGCCAGCATCTCGTCAAC
TTCAACCTGTGGTTCGATATGTCGAGAGGAGATCGCGGTCGCGAAGGAGA
GGCCAGAAGCATCCAAGCAGATGTGACATTGCCCGTGCACCTCAGGTACC
CAGACCCGGGGTGCGAGCGACGCGGAGAGGAGTGCGAAGGGTACGCGTGG
GTGGAG GTAAGCGCAAACATGCCACATGACGTCTTCCGGCGATGCTCGAC
GTGTGTACACGTGCAGCTGCGTTGCGATCGTGCCCGTGGCTTGCAATCAC
CCTTGGATACACGATCCGTGCGCCTTCAACGTTGCCAAAGGCTCCATCGC
CCCGTCTTTCAGCAATGAACCACCCCGTGTCCTCTCCGAATTTAGGTGCC
TCCGCCACTAGCCAGCATCCGATGTGGGAGCGCTGGCAACATGGGGCAAT
TTTCTCCCGTGCTTCCGGCAAGACCGCCAGTCGGGGTTGCGCTTCGGGTG
CCTCGAGGAATTGCTTGGCACAGAGATTTGGTCATGATGGGCACGGCAGG
GGCGGCGGCGCTGGGGTGTTTGTACACGATATACACTCTGTTGGTTGTGG
TACCAACAGGCAAGGCTCGAGGCTCCGATCGAAAAAGTCGCTAG back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:185115..188658-
>mRNA_Ecto-sp6_S_contig100.708.1 ID=mRNA_Ecto-sp6_S_contig100.708.1|Name=mRNA_Ecto-sp6_S_contig100.708.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1830bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:185115..188658- (Ectocarpus species6 EcLAC_371) back to top