prot_Ecto-sp6_S_contig100.766.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig100.766.1
Unique Nameprot_Ecto-sp6_S_contig100.766.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length391
Homology
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BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Match: D8LF50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF50_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 1.490e-28
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0 
Query:    1 MLSEASKDAFTNLECLSFSDAVERSGDRFDGVTLPRGLKSVVFGRWCYQHVDKVLWAAS 59
            MLSEASKDAFT LECLSFSDAVERSGDRFDGVTLPRGLKSVVFGRWCYQHVDKVLWAAS
Sbjct:    1 MLSEASKDAFTKLECLSFSDAVERSGDRFDGVTLPRGLKSVVFGRWCYQHVDKVLWAAS 59
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BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Match: A0A6H5JG83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG83_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 3.970e-25
Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 0 
Query:    1 MLSEASKDAFTNLECLSFSDAVERSGDRFDGVTLPRGLKSVVFGRWCYQHVDKVLWAAS 59
            MLSEASKDAF NLEC+SFSDAVERSGD FDGV LPRGLKSVVFGRWCYQHVDKVLWAAS
Sbjct:   94 MLSEASKDAFKNLECMSFSDAVERSGDSFDGVALPRGLKSVVFGRWCYQHVDKVLWAAS 152
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF50_ECTSI1.490e-2898.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG83_9PHAE3.970e-2593.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 3..390
e-value: 1.1E-9
score: 39.2
IPR008615FNIPPFAMPF05725FNIPcoord: 69..111
e-value: 7.8E-5
score: 22.8
coord: 223..263
e-value: 4.3E-6
score: 26.8
coord: 135..177
e-value: 1.3E-7
score: 31.7
coord: 267..308
e-value: 4.8E-9
score: 36.3
coord: 311..349
e-value: 2.3E-6
score: 27.7
NoneNo IPR availablePANTHERPTHR32134:SF91FNIP REPEAT-CONTAINING PROTEIN-RELATEDcoord: 189..373
coord: 12..248
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 189..373
coord: 12..248
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 33..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:634911..636215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.766.1mRNA_Ecto-sp6_S_contig100.766.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig100 634606..636215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig100.766.1 ID=prot_Ecto-sp6_S_contig100.766.1|Name=mRNA_Ecto-sp6_S_contig100.766.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=391bp
MLSEASKDAFTNLECLSFSDAVERSGDRFDGVTLPRGLKSVVFGRWCYQH
VDKVLWAASLKQITFGNKFNRSIKRIVWPTSLERIVFGWNFNQPVEGVHW
PASLRQLNLGECFNHPVEEVAWPSSLEEIVFPGSFDQPITRVKWPASLRH
LKFGSGFNQPIHQVSWPGSLKKLVFSEKFNQPIHLVSWPTAVEVMSLGLM
FDQPVNEVSWPASLKQLVISGRFNQPIHLVSWPTSLEKIRVGLLFDQPIS
EVSWPASLKELQFLGKFNQPIHLVSWPTSLKKMVFGNSFDQPINEVSWPA
SLKELQFQEKFNQPIHQVSWPTSLEKMFFGNSFDQPINEVLWPASLKELV
ITGKFNQPLHQVRWPTSLEKLVVGDAEATPLLTEFNQLRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP