prot_Ecto-sp6_S_contig10.653.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.653.1
Unique Nameprot_Ecto-sp6_S_contig10.653.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length232
Homology
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BLAST of mRNA_Ecto-sp6_S_contig10.653.1 vs. uniprot
Match: D7G8V7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8V7_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 3.610e-101
Identity = 223/231 (96.54%), Postives = 224/231 (96.97%), Query Frame = 0 
Query:    1 MVRAMPSPKRVGGGLPVQSEGAGGGGGDLLDLMSMDIGGDGGGAEAGSSPERAPEDGSSADEGDTFLAIEAAPQSAPAQXXXXXXXXXXXXXXXXXXXXXXXXXAGKKTFNLIDFDEEGXXXXXXXXXXXXXXXXXXXXXXXVAYSEGAIGPEATVFEVVFPPGRTPNILLEESQPGNKLTVKSFPKRADGSRGTAETDGKIEKGDFLLAVNSIRLEGLGFNDAIRVLTTQ 231
            MVRAMPSPKRVGGGLPVQSEGAG G GDLLDLMSMDIGGDGGGAE GSSPERAPEDGSSA+EGDTFLAIEAAPQSAPA   XXXXXXXXXXXXXXXXXXXXXXXAGKKTFNLIDFDEEGXXXXXXXXXXXXXXXXXXXXXXXVAYSEGAIGPEATVFEVVFPPGRTPNILLEESQPGNKLTVKSFPKRADGSRGTAE DGKIEKGDFLLAVNSIRLEGLGFNDAIRVLTTQ
Sbjct:  140 MVRAMPSPKRVGGGLPVQSEGAGSGEGDLLDLMSMDIGGDGGGAE-GSSPERAPEDGSSANEGDTFLAIEAAPQSAPA-LAXXXXXXXXXXXXXXXXXXXXXXXAGKKTFNLIDFDEEGXXXXXXXXXXXXXXXXXXXXXXXVAYSEGAIGPEATVFEVVFPPGRTPNILLEESQPGNKLTVKSFPKRADGSRGTAEADGKIEKGDFLLAVNSIRLEGLGFNDAIRVLTTQ 368
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8V7_ECTSI3.610e-10196.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.42.10coord: 191..232
e-value: 3.2E-6
score: 28.8
IPR001478PDZ domainPROSITEPS50106PDZcoord: 194..232
score: 9.411
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 194..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:2417927..2420646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.653.1mRNA_Ecto-sp6_S_contig10.653.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 2414976..2420646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.653.1 ID=prot_Ecto-sp6_S_contig10.653.1|Name=mRNA_Ecto-sp6_S_contig10.653.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=232bp
MVRAMPSPKRVGGGLPVQSEGAGGGGGDLLDLMSMDIGGDGGGAEAGSSP
ERAPEDGSSADEGDTFLAIEAAPQSAPAQAAAAAAAGAGGGTATQAKKKK
KAKSAGKKTFNLIDFDEEGEEDGGAGEEEGEGGDAEEEEEEEVAYSEGAI
GPEATVFEVVFPPGRTPNILLEESQPGNKLTVKSFPKRADGSRGTAETDG
KIEKGDFLLAVNSIRLEGLGFNDAIRVLTTQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf