prot_Ecto-sp6_S_contig99.18863.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig99.18863.1
Unique Nameprot_Ecto-sp6_S_contig99.18863.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length404
Homology
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BLAST of mRNA_Ecto-sp6_S_contig99.18863.1 vs. uniprot
Match: D8LSX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX0_ECTSI)

HSP 1 Score: 558 bits (1439), Expect = 3.760e-197
Identity = 321/384 (83.59%), Postives = 325/384 (84.64%), Query Frame = 0 
Query:   19 MLTASVWAGLAPEPAVATAAXXXXXXXXKGYHEGSAIDAFARGREMMRGSEGVEGAPAGVGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXASERGDVGRADLSGQAERGEPSLWERRGRGGHAAGTRRPPSEGSAALTDDAARRRGDSRVEGRHPAPPTNLGLLRTGGAAATFEVTEGQGREGLPRRRTQSRRDEGSGDAEEWPEEEXXXXXXXDDSFGSSGLLALLVCFGLLFCVMEVAKCYFLFECRRRQRWRQRRGATGDTRQMPIASSRVVAPEPPDDGTKGEWVEVVVDGVWMSGDVPGGEGLPSATGYAVAGASHALHDAIEHARRLSPGTGYRAVFAPPAAPPXXXXXXPQAEMSEMSRDDVPPHRSPPVSAAPL 402
            MLTASVWAGLAPEPA     XXXXXXXXKGYH+G AIDAFARGRE+MRGSEG   APAGVG GR                            ASERGDVGRADLSGQAERGEPSLWER+ RGGHAAGTR PPSEGS AL DDAARRRGDSRVEGRHPAPPTNLGLLRTGGAAATFEVTEG GREGL RRRTQSR+DEGSGDAEEWPEEEXXXXXXX        LLALL CFGL FCVMEVAKCYFLFECRRRQRWRQRRGATGDTRQMPIASSRVVAPEPPDDG K EWVEVVVDGVWMSGDVPGGEGLPSATGYAVAGASHALHDAIEHARRLSPGTGYRAVFAPPAAPPXXXXXX  AEMSEMSRDDVPPHRSPPVSAAP 
Sbjct:    1 MLTASVWAGLAPEPAATAXXXXXXXXXXKGYHKGRAIDAFARGREIMRGSEGAGRAPAGVGAGREAAAPPEARVVGGAGDGGEGRMLRRRRQASERGDVGRADLSGQAERGEPSLWERQERGGHAAGTRLPPSEGSTALADDAARRRGDSRVEGRHPAPPTNLGLLRTGGAAATFEVTEGPGREGLTRRRTQSRKDEGSGDAEEWPEEEXXXXXXXXXXXXXXXLLALLGCFGLFFCVMEVAKCYFLFECRRRQRWRQRRGATGDTRQMPIASSRVVAPEPPDDGMKDEWVEVVVDGVWMSGDVPGGEGLPSATGYAVAGASHALHDAIEHARRLSPGTGYRAVFAPPAAPPXXXXXXXXAEMSEMSRDDVPPHRSPPVSAAPF 384
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BLAST of mRNA_Ecto-sp6_S_contig99.18863.1 vs. uniprot
Match: A0A6H5JH97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH97_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 5.060e-150
Identity = 271/384 (70.57%), Postives = 284/384 (73.96%), Query Frame = 0 
Query:   19 MLTASVWAGLAPEPAVATAAXXXXXXXXKGYHEGSAIDAFARGREMMRGSEGVEGAPAGVGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXASERGDVGRADLSGQAERGEPSLWERRGRGGHAAGTRRPPSEGSAALTDDAARRRGDSRVEGRHPAPPTNLGLLRTGGAAATFEVTEGQGREGLPRRRTQSRRDEGSGDAEEWPEEEXXXXXXXDDSFGSSGLLALLVCFGLLFCVMEVAKCYFLFECRRRQRWRQRRGATGDTRQMPIASSRVVAPEPPDDGTKGEWVEVVVDGVWMSGDVPGGEGLPSATGYAVAGASHALHDAIEHARRLSPGTGYRAVFAPPAAPPXXXXXXPQAEMSEMSRDDVPPHRSPPVSAAPL 402
            ML+ASVWAGLAPEPAVATAA        KG+H+GSA+D +ARG +M+RGSEG   APAG     XXXXXXXXXX               X  +SERGDVGRADLSGQAE+ E SL ER+GRGGHAAG+R PPSEGS AL +DAARRRGDS VEGRHPAPPTNLGLL TGGAA TFE     GREG PRRRTQSRRD  SGDAEEWPEEEXXX    DD FGSSGLLALLVCFGLLFCVME                       GDTRQMPIASSRVV P P  D TK  WVEVVVDGVWMSGDVPGGEGLPSATGYAVAGASHALHDAIE+ARRLSPGTGYRAVFAPPAAP        QAEMSEMSRDDVPPHRSP     PL
Sbjct:    1 MLSASVWAGLAPEPAVATAAAGRAGGRGKGHHKGSAMDTYARGPKMVRGSEGAGRAPAGXXX-XXXXXXXXXXXVVGAWVGGEGRMLRRXRRSSERGDVGRADLSGQAEQEEASLSERQGRGGHAAGSRLPPSEGSTALANDAARRRGDSSVEGRHPAPPTNLGLLPTGGAAVTFE-----GREGWPRRRTQSRRD--SGDAEEWPEEEXXXGDENDDGFGSSGLLALLVCFGLLFCVME-----------------------GDTRQMPIASSRVVVPVPQGDRTKDGWVEVVVDGVWMSGDVPGGEGLPSATGYAVAGASHALHDAIEYARRLSPGTGYRAVFAPPAAPSPLPPPQLQAEMSEMSRDDVPPHRSPRFPPRPL 353
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSX0_ECTSI3.760e-19783.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH97_9PHAE5.060e-15070.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..242
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 243..266
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 267..403
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.503
NoneNo IPR availableTMHMMTMhelixcoord: 244..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig99contigEcto-sp6_S_contig99:485593..489487 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig99.18863.1mRNA_Ecto-sp6_S_contig99.18863.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig99 485593..489487 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig99.18863.1 ID=prot_Ecto-sp6_S_contig99.18863.1|Name=mRNA_Ecto-sp6_S_contig99.18863.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=404bp
MVAHGKPARRRRRVWQAAMLTASVWAGLAPEPAVATAAAGRGGGRGKGYH
EGSAIDAFARGREMMRGSEGVEGAPAGVGGGREAAAPPEARVVVGAGGGG
EGRMLRRRRRASERGDVGRADLSGQAERGEPSLWERRGRGGHAAGTRRPP
SEGSAALTDDAARRRGDSRVEGRHPAPPTNLGLLRTGGAAATFEVTEGQG
REGLPRRRTQSRRDEGSGDAEEWPEEEEEDGDENDDSFGSSGLLALLVCF
GLLFCVMEVAKCYFLFECRRRQRWRQRRGATGDTRQMPIASSRVVAPEPP
DDGTKGEWVEVVVDGVWMSGDVPGGEGLPSATGYAVAGASHALHDAIEHA
RRLSPGTGYRAVFAPPAAPPPLPRPQPQAEMSEMSRDDVPPHRSPPVSAA
PLT*
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