prot_Ecto-sp6_S_contig97.18683.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig97.18683.1
Unique Name	prot_Ecto-sp6_S_contig97.18683.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	231

Homology

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BLAST of mRNA_Ecto-sp6_S_contig97.18683.1 vs. uniprot
Match: D8LLD7_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD7_ECTSI)

HSP 1 Score: 381 bits (978), Expect = 5.920e-128
Identity = 199/219 (90.87%), Postives = 202/219 (92.24%), Query Frame = 0

Query:    1 MNVSPDMRLSWLQRWQSMDEDGSNLLDYTEFLQACELRDNMWSWRMFNLLDKNFVEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERVLHSLYKEGASTINREGFGLLKEGLTSARARWARSMSPAELSSPVKIASKRETKHLAESARDISQSGGAIRQLSARKMADTRDWLKVESEMLTEAAKGAARDLAKFGRLKANVTVAVAVNRMRALAEAARQ 219
            MNVSPDMRLSWLQRWQSMDEDGSNLLDY EFLQACELRDNMWSWRMFNLLDKNFVEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEER+LH LY EG           LK+G TSARARWARSMSPAELSSPVKIASKRETKHLAESARDISQSGGAIR+LSARKMADTRDWLKVESEMLTEAAKGAARDL KFGRLKA VTVAVAVNRMRALAEAARQ
Sbjct:    1 MNVSPDMRLSWLQRWQSMDEDGSNLLDYPEFLQACELRDNMWSWRMFNLLDKNFVEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERILHHLYNEG-----------LKDGPTSARARWARSMSPAELSSPVKIASKRETKHLAESARDISQSGGAIRELSARKMADTRDWLKVESEMLTEAAKGAARDLEKFGRLKATVTVAVAVNRMRALAEAARQ 208

[Close]

BLAST of mRNA_Ecto-sp6_S_contig97.18683.1 vs. uniprot
Match: A0A6H5JXQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ3_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 1.790e-68
Identity = 150/291 (51.55%), Postives = 159/291 (54.64%), Query Frame = 0

Query:    1 MNVSPDMRLSWLQRWQSMDEDGSNLLDYTEFLQACELRDNMWSWRMFNLLDKNFVEVAFRMCSRRGSTWDPDKSVL-------------------------------DEKDIRLFVEERVLHSLYKEGAS---TINREGFGLLK---------------------------------------------------EGLTSARARWARSMSPAELSSPVKIASKRETKHLAESARDISQSGGAIRQLSARKMADTRDWLKVESEMLTEAAKGAARDLAKFGRLKANVTVAVA 206
            M VS DMRLSWLQRWQSMDEDGSNLLDYTEFLQAC LRDN+WSWRMFNLLDKNFV V       RG     ++ V                                  K IR    E  +      G +   T+ + G  ++K                                                   E LT ARARWARSMSPAELSS VK ASKR TKHLAESARDISQSGGAIRQLSARKMADTR WLKVESEMLTEAAKGAARDL KFGRLKA  TVAVA
Sbjct:    1 MKVSSDMRLSWLQRWQSMDEDGSNLLDYTEFLQACGLRDNIWSWRMFNLLDKNFVGVMEAYLGARGFVTAVNRRVAAAAQRQFQTMALAAASKKMQVLNGMSSIGNTTAKKIRRVASESSIGRHLNSGGNERPTVAKPGDVVMKRLKLWTTATSAVDSERPLTTRVERVRATLRRVVSDSDLGNIGKSERSAKFGESLTGARARWARSMSPAELSSSVKTASKRATKHLAESARDISQSGGAIRQLSARKMADTRGWLKVESEMLTEAAKGAARDLEKFGRLKAIATVAVA 291

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig97.18683.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig97.18683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LLD7_ECTSI	5.920e-128	90.87	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A6H5JXQ3_9PHAE	1.790e-68	51.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 210..230
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 19..31
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 6..41 score: 8.572
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 11..67

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig97	contig	Ecto-sp6_S_contig97:65933..69269 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig97.18683.1	mRNA_Ecto-sp6_S_contig97.18683.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig97 65933..69269 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig97.18683.1 ID=prot_Ecto-sp6_S_contig97.18683.1|Name=mRNA_Ecto-sp6_S_contig97.18683.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=231bp
MNVSPDMRLSWLQRWQSMDEDGSNLLDYTEFLQACELRDNMWSWRMFNLL
DKNFVEVAFRMCSRRGSTWDPDKSVLDEKDIRLFVEERVLHSLYKEGAST
INREGFGLLKEGLTSARARWARSMSPAELSSPVKIASKRETKHLAESARD
ISQSGGAIRQLSARKMADTRDWLKVESEMLTEAAKGAARDLAKFGRLKAN
VTVAVAVNRMRALAEAARQARQAKRKYESK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair