prot_Ecto-sp6_S_contig96.18645.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig96.18645.1
Unique Name	prot_Ecto-sp6_S_contig96.18645.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	478

Homology

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BLAST of mRNA_Ecto-sp6_S_contig96.18645.1 vs. uniprot
Match: D7FJQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ2_ECTSI)

HSP 1 Score: 884 bits (2284), Expect = 0.000e+0
Identity = 460/477 (96.44%), Postives = 464/477 (97.27%), Query Frame = 0

Query:    1 MKDASDGIDNFKQLSGREKTSKTVEQELALAAAAARRLSLHVNAWTTAELLQELERIWLQAVRAEATIDPQFQHVVTEWEAACAALSRLSRTAQEDSIAGQAERHASATRIRDCQIRAGVGSKAEKAGWWKQRQMRFLREELRHIERKVAPLADPSRLAARYNLLLAKCAEVGGWATAVSAYRSARARGVITKPLRNRRDADGSFSLEPLVYQHLLRAAKNATPPQPRAALLVLREMRLRGEEPAATHYNLVVSACARAAAVAASTSALIPLDRDDTEGHAVLCEDRLYQGIGGADGHKKEGNCGAIHLESDSSGGVVATEKETSKPAKLCSGHEESVEENMQLKGTAFGAKVDVEDLPDRCCLLSTAGDAVECRGAEAAGETWRLALDVIAGMRKRGVTPTLVTFKTLVECCRCAAAASVLNIGGGEGLGKGSTPAEVYTALKEAGIPARFCYQAGLGNALKGGRCFPGYVAEISR 477
            MKDASDGIDNFKQLSGREKTSK VEQELALAAAAARRLSLHVNAWTTAELLQELERIWLQAVRAEATID QF+HVVTEWEAACAALSRLSRTAQEDSIAGQAERHASATRIRDCQIRAGVGSKAEKAGWWKQRQMRFLREELRHIERKVAPLADPS LAARYNLLL +CAEVGGWATAVSAYRSARARGVITKPL NRRDA GSFSLEPLVYQHLLRAAKNATPPQPRAALLVLREMRLRGEEPAATHYNLVVSACARAAAVAASTSAL+PLDRDDTEGHAVLCEDRLYQGIGGADGHKKEGNCGAIHLESDSSGGVVATE ET KPAKLCSGHEE VEENM+LKGTAFGAKVDVEDLPDRCCLL TAGDAVECRGAEAAGETWRLALDVIA MRKRGVTPTLVTFKTLVECCRCAAAASVLNIGGGEGLGKGSTPAEVYTALKEAGIPARFCYQAGL NAL GGRCFPGYVAEISR
Sbjct:    1 MKDASDGIDNFKQLSGREKTSKAVEQELALAAAAARRLSLHVNAWTTAELLQELERIWLQAVRAEATIDSQFRHVVTEWEAACAALSRLSRTAQEDSIAGQAERHASATRIRDCQIRAGVGSKAEKAGWWKQRQMRFLREELRHIERKVAPLADPSHLAARYNLLLVRCAEVGGWATAVSAYRSARARGVITKPLSNRRDAVGSFSLEPLVYQHLLRAAKNATPPQPRAALLVLREMRLRGEEPAATHYNLVVSACARAAAVAASTSALMPLDRDDTEGHAVLCEDRLYQGIGGADGHKKEGNCGAIHLESDSSGGVVATENETPKPAKLCSGHEEGVEENMRLKGTAFGAKVDVEDLPDRCCLLPTAGDAVECRGAEAAGETWRLALDVIADMRKRGVTPTLVTFKTLVECCRCAAAASVLNIGGGEGLGKGSTPAEVYTALKEAGIPARFCYQAGLRNALNGGRCFPGYVAEISR 477

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BLAST of mRNA_Ecto-sp6_S_contig96.18645.1 vs. uniprot
Match: A0A6H5L7G8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G8_9PHAE)

HSP 1 Score: 817 bits (2111), Expect = 7.480e-297
Identity = 428/477 (89.73%), Postives = 447/477 (93.71%), Query Frame = 0

Query:    1 MKDASDGIDNFKQLSGREKTSKTVEQELALAAAAARRLSLHVNAWTTAELLQELERIWLQAVRAEATIDPQFQHVVTEWEAACAALSRLSRTAQEDSIAGQAERHASATRIRDCQIRAGVGSKAEKAGWWKQRQMRFLREELRHIERKVAPLADPSRLAARYNLLLAKCAEVGGWATAVSAYRSARARGVITKPLRNRRDADGSFSLEPLVYQHLLRAAKNATPPQPRAALLVLREMRLRGEEPAATHYNLVVSACARAAAVAASTSALIPLDRDDTEGHAVLCEDRLYQGIGGADGHKKEGNCGAIHLESDSSGGVVATEKETSKPAKLCSGHEESVEENMQLKGTAFGAKVDVEDLPDRCCLLSTAGDAVECRGAEAAGETWRLALDVIAGMRKRGVTPTLVTFKTLVECCRCAAAASVLNIGGGEGLGKGSTPAEVYTALKEAGIPARFCYQAGLGNALKGGRCFPGYVAEISR 477
            MKD SDGIDNFKQL GREKTSKTVEQELALAAAAARRLSLHVNAWTTAELLQELERIWLQAVRAEATIDPQFQHVVTEWE ACAALSRLSRTAQEDS+ GQAERHASATRIRDC+IRAGVGSKA+K GWWKQRQMRFLREELRHIERKVAPLADPSRL ARYNLLLA+CAEVGGWA AVSAY+SARARGVITKP+ NRRDA+ SFSL+PLVYQHLLRAAKNATPPQPRAAL VLREMRLRGEEP ATHYNLVVSACARAAAVAASTSAL+PLDRD TEGHAVL EDRL Q IGGADGHKKEG CGAIHLESDSSGGVVATE ET KPAKL SGH+  V +NM+LK TAFGAKVDVED+PDRCCLL TAGDA++CRGAEAAG++WRLALDVIA MR  GVTPTLVTFKTLVECCRCAAAASVLNIGGGEGLGKGSTPAEVY+ALKEAGIP RFCYQAGLGNA+KG RCFP YVAEISR
Sbjct:    1 MKDVSDGIDNFKQLPGREKTSKTVEQELALAAAAARRLSLHVNAWTTAELLQELERIWLQAVRAEATIDPQFQHVVTEWETACAALSRLSRTAQEDSVTGQAERHASATRIRDCRIRAGVGSKAKKTGWWKQRQMRFLREELRHIERKVAPLADPSRLVARYNLLLARCAEVGGWAIAVSAYQSARARGVITKPMNNRRDANPSFSLKPLVYQHLLRAAKNATPPQPRAALHVLREMRLRGEEPVATHYNLVVSACARAAAVAASTSALMPLDRDGTEGHAVLREDRLCQDIGGADGHKKEGFCGAIHLESDSSGGVVATENETPKPAKLGSGHK-CVAKNMRLKQTAFGAKVDVEDVPDRCCLLPTAGDAMQCRGAEAAGDSWRLALDVIADMRMSGVTPTLVTFKTLVECCRCAAAASVLNIGGGEGLGKGSTPAEVYSALKEAGIPTRFCYQAGLGNAVKGRRCFPAYVAEISR 476

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig96.18645.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig96.18645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FJQ2_ECTSI	0.000e+0	96.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L7G8_9PHAE	7.480e-297	89.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 154..285 e-value: 2.6E-6 score: 29.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 385..413 e-value: 0.0047 score: 17.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig96	contig	Ecto-sp6_S_contig96:443868..445508 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig96.18645.1	mRNA_Ecto-sp6_S_contig96.18645.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig96 443868..447784 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig96.18645.1 ID=prot_Ecto-sp6_S_contig96.18645.1|Name=mRNA_Ecto-sp6_S_contig96.18645.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=478bp
MKDASDGIDNFKQLSGREKTSKTVEQELALAAAAARRLSLHVNAWTTAEL
LQELERIWLQAVRAEATIDPQFQHVVTEWEAACAALSRLSRTAQEDSIAG
QAERHASATRIRDCQIRAGVGSKAEKAGWWKQRQMRFLREELRHIERKVA
PLADPSRLAARYNLLLAKCAEVGGWATAVSAYRSARARGVITKPLRNRRD
ADGSFSLEPLVYQHLLRAAKNATPPQPRAALLVLREMRLRGEEPAATHYN
LVVSACARAAAVAASTSALIPLDRDDTEGHAVLCEDRLYQGIGGADGHKK
EGNCGAIHLESDSSGGVVATEKETSKPAKLCSGHEESVEENMQLKGTAFG
AKVDVEDLPDRCCLLSTAGDAVECRGAEAAGETWRLALDVIAGMRKRGVT
PTLVTFKTLVECCRCAAAASVLNIGGGEGLGKGSTPAEVYTALKEAGIPA
RFCYQAGLGNALKGGRCFPGYVAEISR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat