prot_Ecto-sp6_S_contig96.18638.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig96.18638.1
Unique Name	prot_Ecto-sp6_S_contig96.18638.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	293

Homology

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BLAST of mRNA_Ecto-sp6_S_contig96.18638.1 vs. uniprot
Match: A0A6H5LGR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGR8_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 1.050e-91
Identity = 240/292 (82.19%), Postives = 243/292 (83.22%), Query Frame = 0

Query:    1 MSTIGGASSKQSQRSSSTTRSSRRATLGIGSLSPERSMRTAVLRERSNDGAVKAKETTKASKGPTRTQQMQFAFGSKIIKPSSTGSGSTAGMGSSGAVMPTRGRTTTTAHRGGAVAADTGSALARSRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVQLEEKESVIAELRRQLEAKAGGGDSGVKGXXXXXXXXXXXXXXXXXXXXSDELNEGEKAALRAVQEEARADAEEKLSRVEAVTSAGLASLSEMQDRVDEMIRGLKARRSQ 292
            MST+GGASSK   RSSSTTRSSRRATLGIGSLSPER MRTAV RER+NDGAVKAKETTKASKGPTRTQQMQFAFGSKIIKPSSTGSGSTAGMGSSGAVMPTRGRTT                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LKVQLEEKESVIAELRRQLEAKAGGGDSGVKG                    SDELNEGE+AALRAVQEEARADAEEKLSRVEAVTSAGLASLSEMQDRVDEMIRGLKARRSQ
Sbjct:    1 MSTVGGASSK---RSSSTTRSSRRATLGIGSLSPERFMRTAVFRERNNDGAVKAKETTKASKGPTRTQQMQFAFGSKIIKPSSTGSGSTAGMGSSGAVMPTRGRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKVQLEEKESVIAELRRQLEAKAGGGDSGVKGPSTLSSASDTSKQQQQ----SDELNEGEQAALRAVQEEARADAEEKLSRVEAVTSAGLASLSEMQDRVDEMIRGLKARRSQ 285

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BLAST of mRNA_Ecto-sp6_S_contig96.18638.1 vs. uniprot
Match: D7FJP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP6_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 1.750e-81
Identity = 202/210 (96.19%), Postives = 202/210 (96.19%), Query Frame = 0

Query:    1 MSTIGGASSKQSQRSSSTTRSSRRATLGIGSLSPERSMRTAVLRERSNDGAVKAKETTKASKGPTRTQQMQFAFGSKIIKPSSTGSGSTAGMGSSGAVMPTRGRTTTTAHRGGAVAADTGSALARSRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVQLEEKESVIAELRRQLEAKAGGGDSGVK 210
            MSTIGGASSKQSQRSSSTTRSSRRATLGIGSLSPERSMRTAVLRERSNDGAVKAKETTKASKGPTRTQQMQFAFGSKIIKPSSTGSGSTAGMGS GAVMPTRGRTTTTAH GGAVAADTGSALARSRRE  XX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LKVQLEEKESVIAELRRQLEAKAGGGDSGVK
Sbjct:    1 MSTIGGASSKQSQRSSSTTRSSRRATLGIGSLSPERSMRTAVLRERSNDGAVKAKETTKASKGPTRTQQMQFAFGSKIIKPSSTGSGSTAGMGSGGAVMPTRGRTTTTAHSGGAVAADTGSALARSRRERAXXHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALKVQLEEKESVIAELRRQLEAKAGGGDSGVK 210

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig96.18638.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig96.18638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5LGR8_9PHAE	1.050e-91	82.19	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FJP6_ECTSI	1.750e-81	96.19	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 244..264
None	No IPR available	COILS	Coil	Coil	coord: 177..197

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig96	contig	Ecto-sp6_S_contig96:361448..365298 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig96.18638.1	mRNA_Ecto-sp6_S_contig96.18638.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig96 361448..365908 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig96.18638.1 ID=prot_Ecto-sp6_S_contig96.18638.1|Name=mRNA_Ecto-sp6_S_contig96.18638.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=293bp
MSTIGGASSKQSQRSSSTTRSSRRATLGIGSLSPERSMRTAVLRERSNDG
AVKAKETTKASKGPTRTQQMQFAFGSKIIKPSSTGSGSTAGMGSSGAVMP
TRGRTTTTAHRGGAVAADTGSALARSRRERAARHDTQDQQPQQRASSRGR
GAARAEKQQSLASTTRQESDHHHHHASAALKVQLEEKESVIAELRRQLEA
KAGGGDSGVKGSSALSSASETSKQQQQLQQQSDELNEGEKAALRAVQEEA
RADAEEKLSRVEAVTSAGLASLSEMQDRVDEMIRGLKARRSQ*