prot_Ecto-sp6_S_contig92.18403.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig92.18403.1
Unique Nameprot_Ecto-sp6_S_contig92.18403.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length107
Homology
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BLAST of mRNA_Ecto-sp6_S_contig92.18403.1 vs. uniprot
Match: A0A6H5L0B7_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B7_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 8.210e-18
Identity = 80/85 (94.12%), Postives = 81/85 (95.29%), Query Frame = 0 
Query:    1 MSFQDVRPGQKPSRWQQXXXXXXXXXXXXXXXXXXXXXXXXXXSGRSXXXXXXXXRGWSDASRQGAREGGFGSAGPLRTGGIGAG 85
            MSFQDVRPGQKPSRWQQXXXXXXXXXXXXXXXXXXXXXXXX  SGR  XXXXXXXRGWS+ASRQGAREGGFGSAGPLRTGGIGAG
Sbjct:    1 MSFQDVRPGQKPSRWQQXXXXXXXXXXXXXXXXXXXXXXXXHYSGRKGXXXXXXXRGWSNASRQGAREGGFGSAGPLRTGGIGAG 85
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L0B7_9PHAE8.210e-1894.12t-SNARE coiled-coil homology domain-containing pro... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig92contigEcto-sp6_S_contig92:234094..234414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig92.18403.1mRNA_Ecto-sp6_S_contig92.18403.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig92 234093..234414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig92.18403.1 ID=prot_Ecto-sp6_S_contig92.18403.1|Name=mRNA_Ecto-sp6_S_contig92.18403.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=107bp
MSFQDVRPGQKPSRWQQQQQQQQQNGGGSRTTSSSAGGGGGYYSGRSGSS
SSGGGRGWSDASRQGAREGGFGSAGPLRTGGIGAGGGAAALHHGGLGSSS
SSSSSSS
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