prot_Ecto-sp6_S_contig9.18260.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18260.1
Unique Nameprot_Ecto-sp6_S_contig9.18260.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length131
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18260.1 vs. uniprot
Match: A0A6H5KHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ8_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 1.860e-62
Identity = 107/120 (89.17%), Postives = 110/120 (91.67%), Query Frame = 0
Query:   11 LDCKSLPLALRGVAQSGFGCPASAGGVERGFCVADFFMPSRRSSLDPAYLEMGLFLRAHERNIPNDIPTLTDAQQQAAIPNRFRKQDLLDEVKVLDVELDERSDGQNGDAQEYPSDSDAA 130
            LD KSLPLALR VAQS FGCPASAGGVER FCVADFFMP RRSSLDPAYL++GLFLR H+R IPNDI TLTDAQQQAAIPNRFRKQDLLDEVKVLDVELDERSDGQN DAQEYPSDSD A
Sbjct:  441 LDGKSLPLALRAVAQSVFGCPASAGGVERDFCVADFFMPGRRSSLDPAYLDVGLFLRVHKRIIPNDILTLTDAQQQAAIPNRFRKQDLLDEVKVLDVELDERSDGQNDDAQEYPSDSDTA 560          
BLAST of mRNA_Ecto-sp6_S_contig9.18260.1 vs. uniprot
Match: A0A6H5JP19_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP19_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 2.240e-32
Identity = 67/113 (59.29%), Postives = 81/113 (71.68%), Query Frame = 0
Query:    3 ENGADYWTLDCKSLPLALRGVAQSGFGCPASAGGVERGFCVADFFMPSRRSSLDPAYLEMGLFLRAHERNIPNDIPTLTDAQQQAAIPNRFRKQDLLDEVKVLDVELDERSDG 115
            ENGA+YW L  K  P ALR VAQ+ +G PASAG VER F +AD FMP +R+SLDPAYLEM L+LRAH  +IP DIP L DA   AAIP+RFR    ++EV+VLD   +E+  G
Sbjct:  525 ENGAEYWRLHGKKHPFALRLVAQAVYGVPASAGVVERDFSIADLFMPRKRASLDPAYLEMQLYLRAHFDSIPMDIPKLDDASVAAAIPDRFRDPQAVEEVRVLDFTEEEKEVG 637          
BLAST of mRNA_Ecto-sp6_S_contig9.18260.1 vs. uniprot
Match: A0A6H5KX27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX27_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 3.790e-30
Identity = 64/114 (56.14%), Postives = 81/114 (71.05%), Query Frame = 0
Query:    3 ENGADYW-TLDCKSLPLALRGVAQSGFGCPASAGGVERGFCVADFFMPSRRSSLDPAYLEMGLFLRAHERNIPNDIPTLT-DAQQQAAIPNRFRKQDLLDEVKVLDVELDERSD 114
            ++ ADYW T   KS PL LR VAQ   GCPAS G +ER F +AD FMP +R+S+DPAY EM LFLRA    IP+D+P    +A+Q AAIPNR R + LL+ V+VLDV+++E SD
Sbjct:  662 KDAADYWSTPHGKSQPLPLRAVAQGVLGCPASTGAMERDFSIADMFMPRKRASVDPAYFEMSLFLRAQYDFIPDDVPKFANEAEQTAAIPNRLRDEKLLEAVRVLDVDVEETSD 775          
BLAST of mRNA_Ecto-sp6_S_contig9.18260.1 vs. uniprot
Match: A0A6H5K7T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7T5_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.580e-28
Identity = 65/88 (73.86%), Postives = 70/88 (79.55%), Query Frame = 0
Query:   43 VADFFMPSRRSSLDPAYLEMGLFLRAHERNIPNDIPTLTDAQQQAAIPNRFRKQDLLDEVKVLDVELDERSDGQNGDAQEYPSDSDAA 130
            +AD +M  R     P+    GLFLRAH+R IPNDIPTLTDAQQQ AIPNRF KQDLLDEVKVL+VELDERSDGQN DAQEYPS SD A
Sbjct:  757 IADDWMNLRAILARPS----GLFLRAHKRIIPNDIPTLTDAQQQEAIPNRFPKQDLLDEVKVLNVELDERSDGQNDDAQEYPSGSDTA 840          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KHQ8_9PHAE1.860e-6289.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP19_9PHAE2.240e-3259.29Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX27_9PHAE3.790e-3056.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7T5_9PHAE1.580e-2873.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 8..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:2402052..2402444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18260.1mRNA_Ecto-sp6_S_contig9.18260.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 2401826..2402516 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18260.1 ID=prot_Ecto-sp6_S_contig9.18260.1|Name=mRNA_Ecto-sp6_S_contig9.18260.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=131bp
MLENGADYWTLDCKSLPLALRGVAQSGFGCPASAGGVERGFCVADFFMPS
RRSSLDPAYLEMGLFLRAHERNIPNDIPTLTDAQQQAAIPNRFRKQDLLD
EVKVLDVELDERSDGQNGDAQEYPSDSDAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf