prot_Ecto-sp6_S_contig9.18209.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18209.1
Unique Nameprot_Ecto-sp6_S_contig9.18209.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length763
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18209.1 vs. uniprot
Match: A0A6H5J6J5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J6J5_9PHAE)

HSP 1 Score: 603 bits (1554), Expect = 9.720e-203
Identity = 723/762 (94.88%), Postives = 731/762 (95.93%), Query Frame = 0
Query:    1 MRPTDWRGVLRELQIAEEASDAQPSESRITTFMYASCISRMAKARRWEEALDIMQRMRARGLQPNSYCVSSAXXXXXXXXXXXXXXXXXXXRREDLGEGSPVDEXXXXXXXXXXXXXXXXXXXXXXXXELKVGGKTPHPFXXXXXXXXXXXXXXXXXXXXXXXXMRQARVRTDGFIDVYCVKATITALAKSGKWKQALKIYLEMLDALPANSDAPEANLNLDALRDASLACGRAGDWKASLKLLDEMRAVAITPESGCYKAAMQSCVRNKQWERATSLIDEMTLTYGMVPDLETYQVAISAAGCASLWPKATKMLRQMRQNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDMDGPPGVSPNPSSYQSAMSACGSEGRVDLALELLEEVKAASTTRPELAPSSKLYASALRACVSSPPDGSNARKAKELLEEARGAEIALNWRSYNCAIIAAAKAGEVDEALARLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMIAAGVAMKAGVAGKVASETMTGREGAERALELLERGVEAPGSDASAASP 762
            MRPTDWRGVLRELQIAEEASDAQPSESRITTFMYASCISRMAKARRWEEALDI+QRMRARGLQPNSYCVSSAXXXXXXXXXXXXXXXXXXXRREDLGEGSPVDEXXXXXXXXXXXXXXXXXXXXXXXXELKVGGKTPHPFXXXXXXXXXXXXXXXXXXXXXXXXMRQARVRTDGFIDVYCVK TITALAKSGKWKQALKIYLEMLD LPANSD+PEANLNLDALRDAS ACGRAGDWKASLKLLDEMRAVAITPESGCYKAAMQSCVRN+QWERAT LIDEMTLTYGMVPDLETYQVAISAAGCASLWPKATKMLRQMRQNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDM G PGVSPNP SYQ                 LLEEVKAAS TRPELA  SKLYASAL+ACVSSPPDGS ARKAKELLEEA+GA IALNWRSYNCAIIAAAKAGEVDEALARLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MIAAGV MKAGVAGKVA+ETM+GR+GAERALELLERGVEAPGSDASAASP
Sbjct:   52 MRPTDWRGVLRELQIAEEASDAQPSESRITTFMYASCISRMAKARRWEEALDILQRMRARGLQPNSYCVSSAXXXXXXXXXXXXXXXXXXXRREDLGEGSPVDEXXXXXXXXXXXXXXXXXXXXXXXXELKVGGKTPHPFXXXXXXXXXXXXXXXXXXXXXXXXMRQARVRTDGFIDVYCVKTTITALAKSGKWKQALKIYLEMLDVLPANSDSPEANLNLDALRDASFACGRAGDWKASLKLLDEMRAVAITPESGCYKAAMQSCVRNRQWERATCLIDEMTLTYGMVPDLETYQVAISAAGCASLWPKATKMLRQMRQNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDMVGAPGVSPNPGSYQXXXXXXXXXXXXXXXXXLLEEVKAASKTRPELALCSKLYASALQACVSSPPDGSIARKAKELLEEAQGAGIALNWRSYNCAIIAAAKAGEVDEALARLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMIAAGVVMKAGVAGKVAAETMSGRKGAERALELLERGVEAPGSDASAASP 813          
BLAST of mRNA_Ecto-sp6_S_contig9.18209.1 vs. uniprot
Match: D7G1L0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L0_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 8.160e-7
Identity = 32/76 (42.11%), Postives = 50/76 (65.79%), Query Frame = 0
Query:    5 DWRGVLRELQIAEEAS----DAQP-----SESRITTFMYASCISRMAKARRWEEALDIMQRMRARGLQPNSYCVSS 71
            +WRGV+REL+ AE A     +A+      S+ R+++  Y SC+  +AK  RW EAL + +RM ARG+ PNS+C+++
Sbjct:  125 NWRGVMRELEEAETAEAKFGEAEKGTTGGSDGRVSSHAYNSCLMHLAKCSRWREALAVFERMWARGVTPNSFCLNA 200          
BLAST of mRNA_Ecto-sp6_S_contig9.18209.1 vs. uniprot
Match: A0A812XWW3_SYMPI (PTAC2 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812XWW3_SYMPI)

HSP 1 Score: 59.3 bits (142), Expect = 2.170e-5
Identity = 37/138 (26.81%), Postives = 63/138 (45.65%), Query Frame = 0
Query:  215 PEANLNLDALRDASLACGRAGDWKASLKLLDEMRAVAITPESGCYKAAMQSCVRNKQWERATSLIDEM---------TLTYGMVP--------------------DLETYQVAISAAGCASLWPKATKMLRQMRQNGL 323
            P+ +   D  + A L C  A  W+A+L LL  M  V +TP+ GC+ AA+++C    QW  A ++ D+          TL++ +                      DL+ +  AIS+   A+ W ++  +L +MR+  L
Sbjct:  175 PKLHPGADIFQHAILGCDDACKWEAALTLLASMPKVKVTPDEGCFDAAIRACATVGQWILALNVFDKAVSLDKARASTLSFMLTACRTGAQWELALQLLFGPFQSDLDCFDAAISSCRVAAAWRESVSLLAEMRRRSL 312          
BLAST of mRNA_Ecto-sp6_S_contig9.18209.1 vs. uniprot
Match: A0A6H5KUL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUL4_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 6.820e-5
Identity = 51/201 (25.37%), Postives = 76/201 (37.81%), Query Frame = 0
Query:  177 DVYCVKATITALAKSGKWKQALKIYLEMLDALPANSDAPEANLNLDALRD----------------------------ASLACGRAGDWKASLKLLDEMRAVAITPESGCYKAAMQSCVRNKQ-------------------------------WERATSLIDEMTLTYGMVPDLETYQVAISAAGCASLWPKATKMLRQM 318
            ++Y   A ITALA+ G+W+QAL I   M  +  A   A  A ++     D                            A  ACG  G+W+ +L LL  MR   +      Y AA  +CV +++                               W     L++EM    G+ PD+ T+  AI+A G A  W +A  +L +M
Sbjct:  273 NIYMYNACITALARCGRWRQALAILDHMRFSANAAEAAAAATVDTALKADPAAGVDGGAAMSPPAPAAVRPDVFSYSAAITACGNCGEWRRALALLRVMREQGVVS----YNAAAHACVGDQRKIGETRINGNNGVAEQRGRAAEEXXXXXEEGWAIVLGLMEEMRAE-GVAPDVFTFTTAITACGKAGQWERALDLLEEM 468          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J6J5_9PHAE9.720e-20394.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G1L0_ECTSI8.160e-742.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A812XWW3_SYMPI2.170e-526.81PTAC2 protein n=1 Tax=Symbiodinium pilosum TaxID=2... [more]
A0A6H5KUL4_9PHAE6.820e-525.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 79..99
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 398..567
coord: 101..340
coord: 577..719
coord: 329..480
coord: 29..170
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 539..714
e-value: 1.9E-6
score: 27.4
coord: 184..355
e-value: 1.6E-8
score: 34.2
coord: 363..527
e-value: 1.2E-9
score: 37.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 175..270
e-value: 4.6E-10
score: 41.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 457..571
e-value: 5.2E-28
score: 100.3
coord: 308..456
e-value: 5.7E-37
score: 129.7
coord: 572..748
e-value: 1.0E-25
score: 92.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 4..92
e-value: 1.1E-11
score: 46.5
coord: 93..172
e-value: 3.9E-9
score: 38.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 140..168
e-value: 1.1E-4
score: 22.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 31..76
e-value: 6.5E-8
score: 32.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 140..170
e-value: 1.6E-4
score: 19.6
coord: 33..65
e-value: 2.6E-7
score: 28.4
coord: 619..652
e-value: 1.2E-5
score: 23.2
coord: 689..718
e-value: 0.0011
score: 17.0
coord: 469..501
e-value: 4.1E-6
score: 24.6
coord: 258..291
e-value: 6.3E-4
score: 17.8
coord: 329..362
e-value: 1.0E-6
score: 26.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 431..465
score: 9.942
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 291..325
score: 9.229
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 103..137
score: 8.407
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 30..64
score: 10.972
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 466..500
score: 10.304
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 7.421
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 138..172
score: 9.438
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 177..207
score: 7.892
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 396..430
score: 8.934
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 616..650
score: 10.03
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 537..571
score: 8.659
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 65..95
score: 7.18
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 501..531
score: 6.127
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 686..720
score: 9.251
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..395
score: 8.068
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..290
score: 7.048
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 326..360
score: 12.047
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 651..685
score: 7.432

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1886823..1889111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18209.1mRNA_Ecto-sp6_S_contig9.18209.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 1886823..1889137 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18209.1 ID=prot_Ecto-sp6_S_contig9.18209.1|Name=mRNA_Ecto-sp6_S_contig9.18209.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=763bp
MRPTDWRGVLRELQIAEEASDAQPSESRITTFMYASCISRMAKARRWEEA
LDIMQRMRARGLQPNSYCVSSAIKACGSKKRWKEALELLERRREDLGEGS
PVDEYSLSAAIYACGISGETGKALELLEELKVGGKTPHPFSYTAAISACG
DSGMGDKVMQLFEDMRQARVRTDGFIDVYCVKATITALAKSGKWKQALKI
YLEMLDALPANSDAPEANLNLDALRDASLACGRAGDWKASLKLLDEMRAV
AITPESGCYKAAMQSCVRNKQWERATSLIDEMTLTYGMVPDLETYQVAIS
AAGCASLWPKATKMLRQMRQNGLQPDSKTYSAVITASGKANKWEESLRLL
DDMREVGVEPNCHNFNAAIASCGVARQWQRAVGLLGEMKGGGLELGLSSY
NAAILACATSARGVEASALLGEMRAAGVEPNAATYLPVITACGKAGMWEQ
SVVHLREMTAQGLAPNSPIYTAVITACGHAKEWEKALEILAEMPAAGVKA
SVYHYNTALDACDRAAQGEAAVALLHDMDGPPGVSPNPSSYQSAMSACGS
EGRVDLALELLEEVKAASTTRPELAPSSKLYASALRACVSSPPDGSNARK
AKELLEEARGAEIALNWRSYNCAIIAAAKAGEVDEALARLAEMKDAGLTP
NVMSYSWILPALASRELWEESLALVEEIKGYGLLRTPFAYSVVVAAHSAA
GRWEEVCGVLEDMIAAGVAMKAGVAGKVASETMTGREGAERALELLERGV
EAPGSDASAASP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat