prot_Ecto-sp6_S_contig89.17936.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig89.17936.1
Unique Nameprot_Ecto-sp6_S_contig89.17936.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length69
Homology
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BLAST of mRNA_Ecto-sp6_S_contig89.17936.1 vs. uniprot
Match: D8LKF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF1_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 1.130e-27
Identity = 51/58 (87.93%), Postives = 53/58 (91.38%), Query Frame = 0 
Query:    1 MRKAKTRKTPRRMAWLTRPSLLTMLWLTSLWPLPPSRQTDMHPNLGTHDDLSTKATTV 58
            MRKAKTR+TPRRMAW TR SLLTMLWLTSLWPL PS QTDMHPNL THDDLSTKATT+
Sbjct:    5 MRKAKTRETPRRMAWFTRTSLLTMLWLTSLWPLSPSLQTDMHPNLDTHDDLSTKATTI 62
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKF1_ECTSI1.130e-2787.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..69
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 34..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..38
score: 0.59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig89contigEcto-sp6_S_contig89:299635..300871 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig89.17936.1mRNA_Ecto-sp6_S_contig89.17936.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig89 299632..300871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig89.17936.1 ID=prot_Ecto-sp6_S_contig89.17936.1|Name=mRNA_Ecto-sp6_S_contig89.17936.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=69bp
MRKAKTRKTPRRMAWLTRPSLLTMLWLTSLWPLPPSRQTDMHPNLGTHDD
LSTKATTVIERLAVATEVR
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