prot_Ecto-sp6_S_contig86.17748.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig86.17748.1
Unique Nameprot_Ecto-sp6_S_contig86.17748.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length400
Homology
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BLAST of mRNA_Ecto-sp6_S_contig86.17748.1 vs. uniprot
Match: A0A6H5KXU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU8_9PHAE)

HSP 1 Score: 655 bits (1691), Expect = 1.770e-235
Identity = 348/399 (87.22%), Postives = 357/399 (89.47%), Query Frame = 0 
Query:    1 MVSSRKFAVVCGLDLLHGVSAWLPSPLRVPTSTTTGQHRAVRNIVAGEHHDVRQQWAALRSVADGEGGEGAGRPDLASMKRSFEGTMDNKLIMEYVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKATNRLPSSRGAGPTCTLGELVSSISGRPVSGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATVSATGAAAXXXXEDPKDAQAKGLAAAMVEAAARXXXXXXXXGGAGVRAEGFGRVADVVLTEDGAVRGRGKWGVSGGYHLRWEFNTMNLDLGGDKIVKAGGEGGDGGRNLYEFFLDQNMLIVAWKDAPKKDDAVVFVRDEVPR 399
            MVSSR  AVVCG+DLLHGVSAWLPSPLRV TST T Q  AVR+IVAGEH DVRQQW+ALRSVADGEG  GAGRPDLASMKRSFEGTMDNKLIMEYV ELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKD GKSHYCAMLPGHWIAASTIVPNVPFVYGDGEK+TNR PSSRGAGPTCTLGELVSSISGRPV+GG+LEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKAT SA G   XXXX                     XXXXXXXX GAGVR EGFGRVADVVLTEDGAVRGRGKWGV GGYHLRWEFNTMNLDLGGDKIVKAGGEGGDGGR+LYEFFLDQNMLIVAWKD+PKK+DAVVFVRDEVPR
Sbjct:    1 MVSSRTLAVVCGVDLLHGVSAWLPSPLRVSTSTATDQRWAVRDIVAGEHRDVRQQWSALRSVADGEGDGGAGRPDLASMKRSFEGTMDNKLIMEYVTELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDQGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKSTNRSPSSRGAGPTCTLGELVSSISGRPVTGGQLEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGVRTEGFGRVADVVLTEDGAVRGRGKWGVRGGYHLRWEFNTMNLDLGGDKIVKAGGEGGDGGRDLYEFFLDQNMLIVAWKDSPKKEDAVVFVRDEVPR 399
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BLAST of mRNA_Ecto-sp6_S_contig86.17748.1 vs. uniprot
Match: D7G1F7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F7_ECTSI)

HSP 1 Score: 536 bits (1381), Expect = 1.260e-189
Identity = 290/315 (92.06%), Postives = 293/315 (93.02%), Query Frame = 0 
Query:   87 MDNKLIMEYVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKATNRLPSSRGAGPTCTLGELVSSISGRPVSGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATVSATGAAAXXXXEDP--KDAQAKGLAAAMVEAAARXXXXXXXXGGAGVRAEGFGRVADVVLTEDGAVRGRGKWGVSGGYHLRWEFNTMNLDLGGDKIVKAGGEGGDGGRNLYEFFLDQNMLIVAWKDAPKKDDAVVFVRDEVPR 399
            MDNKLIMEYVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKATNR PSSRGAGPTCTLGELVSSISGRPVSGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKAT SA G   XXXX     KDAQAK LA         XXXXXXXX GAGVRAEGFGRVADVVLTEDGAVRGRGKWGV+GGYHLRWEFNTMNLDLGGDKIVKAGGEGGDGGR+LYEFFLDQNMLIVAWKDAPKK+DAVVFVRDEVPR
Sbjct:    1 MDNKLIMEYVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKATNRSPSSRGAGPTCTLGELVSSISGRPVSGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSAAGXXXXXXXXXXXXKDAQAKALAXXXXXXXXXXXXXXXXXXGAGVRAEGFGRVADVVLTEDGAVRGRGKWGVTGGYHLRWEFNTMNLDLGGDKIVKAGGEGGDGGRDLYEFFLDQNMLIVAWKDAPKKEDAVVFVRDEVPR 315
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXU8_9PHAE1.770e-23587.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1F7_ECTSI1.260e-18992.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..399
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.557

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig86contigEcto-sp6_S_contig86:416475..419657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig86.17748.1mRNA_Ecto-sp6_S_contig86.17748.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig86 416475..420449 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig86.17748.1 ID=prot_Ecto-sp6_S_contig86.17748.1|Name=mRNA_Ecto-sp6_S_contig86.17748.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=400bp
MVSSRKFAVVCGLDLLHGVSAWLPSPLRVPTSTTTGQHRAVRNIVAGEHH
DVRQQWAALRSVADGEGGEGAGRPDLASMKRSFEGTMDNKLIMEYVMELR
SRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCA
MLPGHWIAASTIVPNVPFVYGDGEKATNRLPSSRGAGPTCTLGELVSSIS
GRPVSGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAE
AQPVKATVSATGAAAGGGGEDPKDAQAKGLAAAMVEAAAREPRAAAAAGG
AGVRAEGFGRVADVVLTEDGAVRGRGKWGVSGGYHLRWEFNTMNLDLGGD
KIVKAGGEGGDGGRNLYEFFLDQNMLIVAWKDAPKKDDAVVFVRDEVPR*
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