prot_Ecto-sp6_S_contig82.17430.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig82.17430.1
Unique Nameprot_Ecto-sp6_S_contig82.17430.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length93
Homology
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BLAST of mRNA_Ecto-sp6_S_contig82.17430.1 vs. uniprot
Match: D8LPW2_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW2_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 4.820e-14
Identity = 35/42 (83.33%), Postives = 36/42 (85.71%), Query Frame = 0 
Query:    4 GLLETQGKYAEADRLYLRAIEIGEKALGPDHPHLAISLNNRA 45
            GLLE+QGKY E D LYLRAIEIGEK LGPDHP LA SLNNRA
Sbjct:   45 GLLESQGKYDEGDPLYLRAIEIGEKTLGPDHPALATSLNNRA 86
[Close]
BLAST of mRNA_Ecto-sp6_S_contig82.17430.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 1.210e-10
Identity = 32/41 (78.05%), Postives = 33/41 (80.49%), Query Frame = 0 
Query:    5 LLETQGKYAEADRLYLRAIEIGEKALGPDHPHLAISLNNRA 45
            +LE  GKYAEAD LYLRAIEIGE  LGPDHP LA  LNNRA
Sbjct:  608 VLELMGKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRA 648
[Close]
BLAST of mRNA_Ecto-sp6_S_contig82.17430.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.830e-10
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0 
Query:    1 NLAGLLETQGKYAEADRLYLRAIEIGEKALGPDHPHLAISLNNR 44
            N+   +  +GKYAEAD LYLRAIEIGEK LGPDHP LA  LNNR
Sbjct:  160 NVTWTVRFRGKYAEADPLYLRAIEIGEKMLGPDHPDLATRLNNR 203
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BLAST of mRNA_Ecto-sp6_S_contig82.17430.1 vs. uniprot
Match: A0A7S3NLU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLU4_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 4.460e-10
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 
Query:    1 NLAGLLETQGKYAEADRLYLRAIEIGEKALGPDHPHLA 38
            NLAGLLE+QGKY EA  LY RAIEIGEK LGP+HP+LA
Sbjct:    4 NLAGLLESQGKYNEAKPLYERAIEIGEKTLGPNHPNLA 41
[Close]
BLAST of mRNA_Ecto-sp6_S_contig82.17430.1 vs. uniprot
Match: A0A6H5KSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 5.290e-10
Identity = 32/44 (72.73%), Postives = 36/44 (81.82%), Query Frame = 0 
Query:    2 LAGLLETQGKYAEADRLYLRAIEIGEKALGPDHPHLAISLNNRA 45
            LA +LE QGK+AEAD LYLRAIE+ EK LG DHP LA S+NNRA
Sbjct:  333 LALVLEKQGKHAEADPLYLRAIEVAEKMLGRDHPDLATSINNRA 376
[Close]
BLAST of mRNA_Ecto-sp6_S_contig82.17430.1 vs. uniprot
Match: A0A6H5L045_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L045_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 5.940e-9
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 0 
Query:   10 GKYAEADRLYLRAIEIGEKALGPDHPHLAISLNNRA 45
            GKYAEAD LYLRAI+IG+K LGPDHP LA  LNNRA
Sbjct:   10 GKYAEADPLYLRAIDIGKKMLGPDHPDLAAWLNNRA 45
[Close]
BLAST of mRNA_Ecto-sp6_S_contig82.17430.1 vs. uniprot
Match: D8LQL3_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL3_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 3.180e-8
Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 0 
Query:    9 QGKYAEADRLYLRAIEIGEKALGPDHPHLAISLNNRA 45
            QGKY EADRL LR IE+GE  LGPDHP +AI LNNRA
Sbjct:  297 QGKYVEADRLCLRDIEMGEDTLGPDHPDVAIRLNNRA 333
[Close]
BLAST of mRNA_Ecto-sp6_S_contig82.17430.1 vs. uniprot
Match: A0A2W4QJT5_9GAMM (Uncharacterized protein n=1 Tax=Candidatus Methylumidiphilus alinenensis TaxID=2202197 RepID=A0A2W4QJT5_9GAMM)

HSP 1 Score: 55.1 bits (131), Expect = 6.740e-8
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0 
Query:    2 LAGLLETQGKYAEADRLYLRAIEIGEKALGPDHPHLAISLNNRA 45
            +A L  +QGKYAEA+ LY  ++ I EKALG DHP +A+SLNN A
Sbjct:    1 MAELYRSQGKYAEAEPLYQSSLAIAEKALGKDHPDVAVSLNNLA 44
[Close]
BLAST of mRNA_Ecto-sp6_S_contig82.17430.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 8.380e-8
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0 
Query:    5 LLETQGKYAEADRLYLRAIEIGEKALGPDHPHLAISLNNRA 45
            L E +G +AEAD   LRAIEIGEK LGP+HP LA+ LNNRA
Sbjct:  639 LHELEGNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRA 679
[Close]
BLAST of mRNA_Ecto-sp6_S_contig82.17430.1 vs. uniprot
Match: D8LLM3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM3_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 1.380e-7
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 0 
Query:   10 GKYAEADRLYLRAIEIGEKALGPDHPHLAISLNNRAM 46
            G+  EAD LYLRAIE+GEK LGPDHP LA  LNN+A+
Sbjct:    8 GEDTEADPLYLRAIEVGEKKLGPDHPDLATWLNNQAV 44
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPW2_ECTSI4.820e-1483.33TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
D7G6W2_ECTSI1.210e-1078.05NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5K0C4_9PHAE2.830e-1070.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3NLU4_9STRA4.460e-1078.95Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A6H5KSC7_9PHAE5.290e-1072.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L045_9PHAE5.940e-980.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQL3_ECTSI3.180e-875.68TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A2W4QJT5_9GAMM6.740e-859.09Uncharacterized protein n=1 Tax=Candidatus Methylu... [more]
A0A6H5JJK0_9PHAE8.380e-868.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLM3_ECTSI1.380e-770.27Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 1..70
e-value: 7.5E-18
score: 64.6
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 1..92
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 1..92
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..93
e-value: 3.4E-34
score: 120.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..91
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..71
score: 11.416

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:390054..390772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17430.1mRNA_Ecto-sp6_S_contig82.17430.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig82 390054..390773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig82.17430.1 ID=prot_Ecto-sp6_S_contig82.17430.1|Name=mRNA_Ecto-sp6_S_contig82.17430.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=93bp
NLAGLLETQGKYAEADRLYLRAIEIGEKALGPDHPHLAISLNNRAMLLKN
LGKYEEAEPLNRRSLAIDEEVYGPDHPNVATGLSNLAGLLESQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom