prot_Ecto-sp6_S_contig8.17111.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig8.17111.1
Unique Nameprot_Ecto-sp6_S_contig8.17111.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length175
Homology
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BLAST of mRNA_Ecto-sp6_S_contig8.17111.1 vs. uniprot
Match: D7G8D6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D6_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 2.130e-85
Identity = 141/151 (93.38%), Postives = 142/151 (94.04%), Query Frame = 0 
Query:    1 MPEPRVPRFRVPAALVSPASLFLVGGIAYYFSLDKPSEDELNSNIGKEFPDVVRGRHEVDDRMKEFFKRVNNNDPREEERMRDLLNKGKGSHYSAKRRHATTKDIEEFGFISKPAGTSSSQTAPAAXXXXT--IAPLAENKRPPAPTNKTI 149
            MPEPRVPRFRVPAALVSPASLFLVGGI YYFSLDKPSEDELNSNIGKEFPDVVRGRHEVDDRMKEFFKRVNNNDPREEERMRDLLNKGKGSHYSAKRRHATTKDIEEFGFISKPAGTSSSQTAP  XXXX   IAPLAENKRPP   +KTI
Sbjct:    1 MPEPRVPRFRVPAALVSPASLFLVGGIVYYFSLDKPSEDELNSNIGKEFPDVVRGRHEVDDRMKEFFKRVNNNDPREEERMRDLLNKGKGSHYSAKRRHATTKDIEEFGFISKPAGTSSSQTAPXXXXXXXXXIAPLAENKRPPGWGSKTI 151
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig8.17111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8D6_ECTSI2.130e-8593.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig8contigEcto-sp6_S_contig8:1763263..1765281 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig8.17111.1mRNA_Ecto-sp6_S_contig8.17111.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig8 1763215..1765508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig8.17111.1 ID=prot_Ecto-sp6_S_contig8.17111.1|Name=mRNA_Ecto-sp6_S_contig8.17111.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=175bp
MPEPRVPRFRVPAALVSPASLFLVGGIAYYFSLDKPSEDELNSNIGKEFP
DVVRGRHEVDDRMKEFFKRVNNNDPREEERMRDLLNKGKGSHYSAKRRHA
TTKDIEEFGFISKPAGTSSSQTAPAATTTTTIAPLAENKRPPAPTNKTIA
IYCGVCATAAFPQMNRVSNFSTRS*
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