prot_Ecto-sp6_S_contig102.845.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig102.845.1
Unique Nameprot_Ecto-sp6_S_contig102.845.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length1472
Homology
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match: A0A6H5K2P5_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P5_9PHAE)

HSP 1 Score: 522 bits (1344), Expect = 8.640e-152
Identity = 367/413 (88.86%), Postives = 369/413 (89.35%), Query Frame = 0
Query:  747 AGGDADGTVVRRYTEVDFTNGELPSGATMFEAVQMLMLKHARETAGGEVPTTSSGDRFPHRSMPMPREQWGKTITLEFSPRSCSSHSAKPLPASSAACASPGVAAGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADWPSRRVGGXXXXXXXXXXXXXXRRDRKGKDKKEKPLEVLELPRVLAPGATPLDARLAVVHGLMEKGGGGGIGAGFRFGEHLCLLSALQAVCEEWSGLRRSLLSQGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLRSAAGTARAGGGVLRRVGGGGGADSPASLAMPLPELLRQ 1159
            AGGDA GTVVRRYTEVDFTNGELPSGATMFEAVQMLMLKHARETAGGEVP TSSGDRFPHRSMPMPREQWGK ITLEFSPRSCSSHSAKP                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXX RRDRKG DKK K LEVLELP VLAPGATPLDARLAVVHGLMEKGGGGGIGAGFRFGEHLCLLSALQAVCEEW GLRRSL+S GSVAGDGDLPDPHPSVLHDLARRCIVSGLQRK ACNPLALCTGSLPSWC+GLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPL SAAGTARAGGGVLRRV G  GADSPASLAMPLPELLRQ
Sbjct: 1174 AGGDAGGTVVRRYTEVDFTNGELPSGATMFEAVQMLMLKHARETAGGEVPITSSGDRFPHRSMPMPREQWGKAITLEFSPRSCSSHSAKPXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRDRKGMDKKGKALEVLELPGVLAPGATPLDARLAVVHGLMEKGGGGGIGAGFRFGEHLCLLSALQAVCEEWLGLRRSLVSHGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRK-ACNPLALCTGSLPSWCVGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLGSAAGTARAGGGVLRRVVGADGADSPASLAMPLPELLRQ 1575          
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match: D7FHF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF2_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 2.100e-63
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0
Query: 1052 KQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLRSAAGTARAGGGVLRRVGGGGGADSPASLAMPLPELLRQLGRLGRLTV 1168
            KQACNPLALCTGSLPSWC+GLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLRSAAGTARAGGGVLRRVGG GGADSPASLAMPLPELLRQLGRLGRLT+
Sbjct:    7 KQACNPLALCTGSLPSWCVGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLRSAAGTARAGGGVLRRVGGAGGADSPASLAMPLPELLRQLGRLGRLTI 123          
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match: D7FHF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF3_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 4.080e-6
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query:    1 MTIPGMVDEDSPAGPGVRIQLMSTRREMP 29
            MTIPGMVDEDSPAGPGVRIQLMSTRREMP
Sbjct:  179 MTIPGMVDEDSPAGPGVRIQLMSTRREMP 207          
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match: A0A2J6L7G1_LACSA (HECT-type E3 ubiquitin transferase n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6L7G1_LACSA)

HSP 1 Score: 62.4 bits (150), Expect = 8.860e-6
Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 0
Query: 1019 SQGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEK 1106
            S+G ++   D+  P   VL D      ++    +Q  + LALC+GSLPSWC  L +  P LF  ETR      TAFG++RA+  +Q++
Sbjct: 1275 SEGKISSVNDIFTPGVRVLSDEFVNSKLTSKLSRQIQDVLALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALHRLQQQ 1362          
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match: A0A7J7NUE2_9MAGN (HECT-type E3 ubiquitin transferase n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7NUE2_9MAGN)

HSP 1 Score: 62.0 bits (149), Expect = 1.170e-5
Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 0
Query: 1019 SQGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEK 1106
            S+G ++  G+L      V HD      ++    +Q  + LALC+GSLPSWC  L +  P LF  ETR      TAFG++RA+  +Q++
Sbjct: 1361 SKGKISSLGELNTSGAKVPHDEFVSAKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALHRLQQQ 1448          
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match: UPI00053B3BA1 (E3 ubiquitin-protein ligase UPL3-like n=2 Tax=Camelina sativa TaxID=90675 RepID=UPI00053B3BA1)

HSP 1 Score: 62.0 bits (149), Expect = 1.170e-5
Identity = 39/114 (34.21%), Postives = 58/114 (50.88%), Query Frame = 0
Query:  997 LCLLSALQAVCEEWSGLRRSLLS----QGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEK 1106
            L LL  L+ + +    LR   +S    +G +A   DL      V H+      ++    +Q  + LALC+GSLPSWC  L R  P LF  +TR      TAFG++RA+  +Q++
Sbjct: 1336 LALLRVLEGLNQLCPRLRAQTVSDRFAEGKIASLDDLSTTAAKVPHEEFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTRACPFLFPFQTRRQYFYSTAFGLSRALNRLQQQ 1449          
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match: A0A2P5EWT1_TREOI (HECT-type E3 ubiquitin transferase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5EWT1_TREOI)

HSP 1 Score: 61.2 bits (147), Expect = 2.000e-5
Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 0
Query:  997 LCLLSALQAVCEEWSGLRRSLLS----QGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEK 1106
            L LL  L+ + +  S LR  ++S    +GSV+   DL      V  +      ++    +Q  + LALC+GSLPSWC  L +  P LF  ETR      TAFG++RA+  +Q++
Sbjct: 1336 LALLRVLEGLNQLASRLRAQIVSDNFAEGSVSSLDDLISTGSRVSTEEFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQ 1449          
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match: A0A7I8K2Z8_SPIIN (HECT-type E3 ubiquitin transferase n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K2Z8_SPIIN)

HSP 1 Score: 60.8 bits (146), Expect = 2.630e-5
Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = 0
Query: 1019 SQGSVAGDGDLPDPHPSV-LHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEK 1106
            ++G ++   +L    P V L +     +   L R Q  + LALC+GSLPSWC  LPR  P LF  ETR      TAFG++RA+  +Q++
Sbjct: 1360 AEGKISNFDELSVTGPKVRLEEFISNKLSPKLAR-QIQDALALCSGSLPSWCYQLPRACPFLFPFETRRDFFYSTAFGLSRALHRLQQQ 1447          
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match: A0A2I4EWL9_JUGRE (HECT-type E3 ubiquitin transferase n=16 Tax=Fagales TaxID=3502 RepID=A0A2I4EWL9_JUGRE)

HSP 1 Score: 60.5 bits (145), Expect = 3.440e-5
Identity = 38/114 (33.33%), Postives = 60/114 (52.63%), Query Frame = 0
Query:  997 LCLLSALQAVCEEWSGLRRSLL----SQGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEK 1106
            L LL  L+ + +  S LR  +L    ++G ++   +L      VL +      ++    +Q  + LALC+GSLPSWC  L +  P LF  ETR      TAFG++RA+  +Q++
Sbjct: 1340 LALLRVLEGLNQLASHLRAQVLCDNFAEGKISSLDELSTTGARVLSEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQ 1453          
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match: A0A7J9H3T8_9ROSI (HECT domain-containing protein (Fragment) n=1 Tax=Gossypium harknessii TaxID=34285 RepID=A0A7J9H3T8_9ROSI)

HSP 1 Score: 60.1 bits (144), Expect = 3.480e-5
Identity = 39/113 (34.51%), Postives = 59/113 (52.21%), Query Frame = 0
Query:  997 LCLLSALQAVCEEWSGLRRSLLS----QGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQE 1105
            L LL  L+ + +    LR  ++S    +G+V   G+L      V H+      ++    +Q  + LALC+GSLPSWC  L +  P LF  ETR      TAFG++RA+  +Q+
Sbjct:  249 LALLRVLEGLNQLAPRLRAQIVSDNFAEGNVLTLGELSTSGSRVPHEEFINGKLTPKLARQIQDVLALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQ 361          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5K2P5_9PHAE8.640e-15288.86HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FHF2_ECTSI2.100e-6397.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHF3_ECTSI4.080e-6100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2J6L7G1_LACSA8.860e-637.50HECT-type E3 ubiquitin transferase n=3 Tax=Lactuca... [more]
A0A7J7NUE2_9MAGN1.170e-537.50HECT-type E3 ubiquitin transferase n=1 Tax=Kingdon... [more]
UPI00053B3BA11.170e-534.21E3 ubiquitin-protein ligase UPL3-like n=2 Tax=Came... [more]
A0A2P5EWT1_TREOI2.000e-535.09HECT-type E3 ubiquitin transferase n=2 Tax=Cannaba... [more]
A0A7I8K2Z8_SPIIN2.630e-539.33HECT-type E3 ubiquitin transferase n=2 Tax=Spirode... [more]
A0A2I4EWL9_JUGRE3.440e-533.33HECT-type E3 ubiquitin transferase n=16 Tax=Fagale... [more]
A0A7J9H3T8_9ROSI3.480e-534.51HECT domain-containing protein (Fragment) n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1236..1268
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 536..1213
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 536..1213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:191404..201537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.845.1mRNA_Ecto-sp6_S_contig102.845.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig102 188761..201537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig102.845.1 ID=prot_Ecto-sp6_S_contig102.845.1|Name=mRNA_Ecto-sp6_S_contig102.845.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1472bp
MTIPGMVDEDSPAGPGVRIQLMSTRREMPPPPLSSAAAASAAAAAGGGSG
SQQQQQQASASQGQGRQGGGGLAARRPVAAGGLAQRRPLPAPPGTARGGA
SAAAAGRPNGRGNKAPATAAAAAAAAAGAATSSSGSPAPRAAAAKAGTAA
AAAAKAAKAARATTGSSGCAGSSTKEPRSRRIVRGRRTPSSSSGTGGAGA
AAGGGSRPVTRGRRSGTTGEGDGSATAGHVSSSSSNSKRKRGEDSGAAGG
GRGSSTVATCADEAATPAAAAPAAATQGRTLRARRTRSSSTSASSSSAAA
AATAGTAATSSRGRVSTRRGVAAAATIGMAAPAPPVADPSSSTPSTRKAS
SSSPRGSGSGSGSSSSGGGGGRRKSYAAPSPPPSAAAAAASASTAAEAAK
GGGVAARASSSSSSSHKRRRVSSPPSTSAAAEGAAAAGSGRSKRTTGTAT
AGATGVVRSGGGGGGGSPRRSSRSAAAAAAAAAKSKRGGTTNKLPAAAAA
GGDGGTAAVASSTCAGSAKTKRGSKSKSKKTPSPRQRQQPQQQKQPAKRV
SGRASTGGGGRNSSRRVASPGTATTSPRRGSTPVASRTSGSSSRGGGSGL
PATAGGEGWQPPWRAGGAATAAAAAAAAAAAAAAAASAGSSSAAGGGSST
RNRSSSSSSSSSKLPILQWTLRYHWPDTDGGVSGGGGGGGSSGSRKRNSK
GRAGGAVEENRGKGRGHNNNSSTEEAGEEEAALALGGRQGGAEVVVAGGD
ADGTVVRRYTEVDFTNGELPSGATMFEAVQMLMLKHARETAGGEVPTTSS
GDRFPHRSMPMPREQWGKTITLEFSPRSCSSHSAKPLPASSAACASPGVA
AGRAASAAPPASASGGPAGSGAAASSSSGGGGSGASAAAGPLPPAEASSS
SSAPAGPSSAAGSAADWPSRRVGGGGGGSGSGGGGSGGRRDRKGKDKKEK
PLEVLELPRVLAPGATPLDARLAVVHGLMEKGGGGGIGAGFRFGEHLCLL
SALQAVCEEWSGLRRSLLSQGSVAGDGDLPDPHPSVLHDLARRCIVSGLQ
RKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAV
AHVQEKAKNVEDIPAVAAPLRSAAGTARAGGGVLRRVGGGGGADSPASLA
MPLPELLRQLGRLGRLTVLLSRDSILEMATFLFGLLVNGQQPPPPPPQPQ
QQQQQQQQQQSSQRLPPPSSAPAPAGGGEGSSQQRRRRQQQQQLQLQQQQ
QQQQQQQQQQQQQQQRRRISAGSTPASGSSGGASASASAARRRSAMAAAA
TAAAAATGGGGGGGSRSPYSLGSGGGAMMGRARLYGEEQEEDVGEDEEGE
EEEEEEEEGWNALDVEEEDDDDEEEEGDEDYEGYHHHGEAYHDEEVDEEE
EEDELDEVVLDEEDLAAAEEGATAAEAAAVATNGGGGASREGWGGDDEGR
DSRREGGSVDVGGGDHDGSGVG
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