Homology
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match:
A0A6H5K2P5_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P5_9PHAE)
HSP 1 Score: 522 bits (1344), Expect = 9.420e-149
Identity = 367/413 (88.86%), Postives = 369/413 (89.35%), Query Frame = 2
Query: 3548 AGGDADGTVVRRYTEVDFTNGELPSGATMFEAVQMLMLKHARETAGGEVPTTSSGDRFPHRSMPMPREQWGKTITLEFSPRSCSSHSAKPLPASSAACASPGVAAGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADWPSRRVGGXXXXXXXXXXXXXXRRDRKGKDKKEKPLEVLELPRVLAPGATPLDARLAVVHGLMEKGGGGGIGAGFRFGEHLCLLSALQAVCEEWSGLRRSLLSQGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLRSAAGTARAGGGVLRRVGGGGGADSPASLAMPLPELLRQ 4786
AGGDA GTVVRRYTEVDFTNGELPSGATMFEAVQMLMLKHARETAGGEVP TSSGDRFPHRSMPMPREQWGK ITLEFSPRSCSSHSAKP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX RRDRKG DKK K LEVLELP VLAPGATPLDARLAVVHGLMEKGGGGGIGAGFRFGEHLCLLSALQAVCEEW GLRRSL+S GSVAGDGDLPDPHPSVLHDLARRCIVSGLQRK ACNPLALCTGSLPSWC+GLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPL SAAGTARAGGGVLRRV G GADSPASLAMPLPELLRQ
Sbjct: 1174 AGGDAGGTVVRRYTEVDFTNGELPSGATMFEAVQMLMLKHARETAGGEVPITSSGDRFPHRSMPMPREQWGKAITLEFSPRSCSSHSAKPXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRDRKGMDKKGKALEVLELPGVLAPGATPLDARLAVVHGLMEKGGGGGIGAGFRFGEHLCLLSALQAVCEEWLGLRRSLVSHGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRK-ACNPLALCTGSLPSWCVGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLGSAAGTARAGGGVLRRVVGADGADSPASLAMPLPELLRQ 1575
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match:
D7FHF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF2_ECTSI)
HSP 1 Score: 221 bits (563), Expect = 2.750e-63
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 2
Query: 4463 KQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLRSAAGTARAGGGVLRRVGGGGGADSPASLAMPLPELLRQLGRLGRLTV 4813
KQACNPLALCTGSLPSWC+GLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLRSAAGTARAGGGVLRRVGG GGADSPASLAMPLPELLRQLGRLGRLT+
Sbjct: 7 KQACNPLALCTGSLPSWCVGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLRSAAGTARAGGGVLRRVGGAGGADSPASLAMPLPELLRQLGRLGRLTI 123
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match:
D7FHF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF3_ECTSI)
HSP 1 Score: 126 bits (316), Expect = 2.500e-28
Identity = 86/91 (94.51%), Postives = 86/91 (94.51%), Query Frame = 2
Query: 1124 GAW*SRRLGAAQAAGLTLPPGAGRVSGXXXXXXXXXXXHPHGGXXXXXRIXXGARAGGTILRMTIPGMVDEDSPAGPGVRIQLMSTRREMP 1396
GAW L AAQAAGLTLPPGAGRVSGXXXXXXXXXXXHPHGGXXXXXRIXXGARAGGTILRMTIPGMVDEDSPAGPGVRIQLMSTRREMP
Sbjct: 117 GAWPPELLEAAQAAGLTLPPGAGRVSGXXXXXXXXXXXHPHGGXXXXXRIXXGARAGGTILRMTIPGMVDEDSPAGPGVRIQLMSTRREMP 207
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match:
A0A2J6L7G1_LACSA (HECT-type E3 ubiquitin transferase n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6L7G1_LACSA)
HSP 1 Score: 62.4 bits (150), Expect = 1.200e-5
Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 2
Query: 4364 SQGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEK 4627
S+G ++ D+ P VL D ++ +Q + LALC+GSLPSWC L + P LF ETR TAFG++RA+ +Q++
Sbjct: 1275 SEGKISSVNDIFTPGVRVLSDEFVNSKLTSKLSRQIQDVLALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALHRLQQQ 1362
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match:
A0A7J7NUE2_9MAGN (HECT-type E3 ubiquitin transferase n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7NUE2_9MAGN)
HSP 1 Score: 62.0 bits (149), Expect = 1.590e-5
Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 2
Query: 4364 SQGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEK 4627
S+G ++ G+L V HD ++ +Q + LALC+GSLPSWC L + P LF ETR TAFG++RA+ +Q++
Sbjct: 1361 SKGKISSLGELNTSGAKVPHDEFVSAKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALHRLQQQ 1448
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match:
UPI00053B3BA1 (E3 ubiquitin-protein ligase UPL3-like n=2 Tax=Camelina sativa TaxID=90675 RepID=UPI00053B3BA1)
HSP 1 Score: 62.0 bits (149), Expect = 1.590e-5
Identity = 39/114 (34.21%), Postives = 58/114 (50.88%), Query Frame = 2
Query: 4298 LCLLSALQAVCEEWSGLRRSLLS----QGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEK 4627
L LL L+ + + LR +S +G +A DL V H+ ++ +Q + LALC+GSLPSWC L R P LF +TR TAFG++RA+ +Q++
Sbjct: 1336 LALLRVLEGLNQLCPRLRAQTVSDRFAEGKIASLDDLSTTAAKVPHEEFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTRACPFLFPFQTRRQYFYSTAFGLSRALNRLQQQ 1449
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match:
A0A2P5EWT1_TREOI (HECT-type E3 ubiquitin transferase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5EWT1_TREOI)
HSP 1 Score: 61.2 bits (147), Expect = 2.710e-5
Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 2
Query: 4298 LCLLSALQAVCEEWSGLRRSLLS----QGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEK 4627
L LL L+ + + S LR ++S +GSV+ DL V + ++ +Q + LALC+GSLPSWC L + P LF ETR TAFG++RA+ +Q++
Sbjct: 1336 LALLRVLEGLNQLASRLRAQIVSDNFAEGSVSSLDDLISTGSRVSTEEFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQ 1449
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match:
A0A7I8K2Z8_SPIIN (HECT-type E3 ubiquitin transferase n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K2Z8_SPIIN)
HSP 1 Score: 60.8 bits (146), Expect = 3.570e-5
Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = 2
Query: 4364 SQGSVAGDGDLPDPHPSV-LHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEK 4627
++G ++ +L P V L + + L R Q + LALC+GSLPSWC LPR P LF ETR TAFG++RA+ +Q++
Sbjct: 1360 AEGKISNFDELSVTGPKVRLEEFISNKLSPKLAR-QIQDALALCSGSLPSWCYQLPRACPFLFPFETRRDFFYSTAFGLSRALHRLQQQ 1447
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match:
A0A2I4EWL9_JUGRE (HECT-type E3 ubiquitin transferase n=16 Tax=Fagales TaxID=3502 RepID=A0A2I4EWL9_JUGRE)
HSP 1 Score: 60.5 bits (145), Expect = 4.670e-5
Identity = 38/114 (33.33%), Postives = 60/114 (52.63%), Query Frame = 2
Query: 4298 LCLLSALQAVCEEWSGLRRSLL----SQGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEK 4627
L LL L+ + + S LR +L ++G ++ +L VL + ++ +Q + LALC+GSLPSWC L + P LF ETR TAFG++RA+ +Q++
Sbjct: 1340 LALLRVLEGLNQLASHLRAQVLCDNFAEGKISSLDELSTTGARVLSEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQ 1453
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Match:
A0A7J9H3T8_9ROSI (HECT domain-containing protein (Fragment) n=1 Tax=Gossypium harknessii TaxID=34285 RepID=A0A7J9H3T8_9ROSI)
HSP 1 Score: 60.1 bits (144), Expect = 4.710e-5
Identity = 39/113 (34.51%), Postives = 59/113 (52.21%), Query Frame = 2
Query: 4298 LCLLSALQAVCEEWSGLRRSLLS----QGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQE 4624
L LL L+ + + LR ++S +G+V G+L V H+ ++ +Q + LALC+GSLPSWC L + P LF ETR TAFG++RA+ +Q+
Sbjct: 249 LALLRVLEGLNQLAPRLRAQIVSDNFAEGNVLTLGELSTSGSRVPHEEFINGKLTPKLARQIQDVLALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQ 361
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.845.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 21
0 1 Expect = 9.42e-149 / Id = 88.86 Expect = 2.75e-63 / Id = 97.44 Expect = 2.50e-28 / Id = 94.51 Expect = 1.20e-5 / Id = 37.50 Expect = 1.59e-5 / Id = 37.50 Expect = 1.59e-5 / Id = 34.21 Expect = 2.71e-5 / Id = 35.09 Expect = 3.57e-5 / Id = 39.33 Expect = 4.67e-5 / Id = 33.33 Expect = 4.71e-5 / Id = 34.51 Sequence A0A6H5K2P5_9PHAE D7FHF2_ECTSI D7FHF3_ECTSI A0A2J6L7G1_LACSA A0A7J7NUE2_9MAGN UPI00053B3BA1 A0A2P5EWT1_TREOI A0A7I8K2Z8_SPIIN A0A2I4EWL9_JUGRE A0A7J9H3T8_9ROSI
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Viridiplantae
Stop 0
Start 1
Seed ortholog score 64.3
Seed ortholog evalue 5.4e-07
Seed eggNOG ortholog 90675.XP_010431802.1
Model size 5725
KEGG ko ko:K10590
KEGG Pathway ko04120,map04120
Hectar predicted targeting category other localisation
GOs GO:0000902,GO:0000904,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006464,GO:0006725,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009653,GO:0009888,GO:0009987,GO:0010026,GO:0010090,GO:0010091,GO:0016020,GO:0016043,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0022402,GO:0030154,GO:0032446,GO:0032502,GO:0032989,GO:0034641,GO:0034645,GO:0036211,GO:0042023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0044786,GO:0046483,GO:0048468,GO:0048856,GO:0048869,GO:0061630,GO:0061659,GO:0070647,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0090558,GO:0090626,GO:0140096,GO:1901360,GO:1901564,GO:1901576
Exons 15
EggNOG free text desc. Domain Homologous to E6-AP Carboxyl Terminus with
EggNOG OGs 37IGM@33090,3GAK1@35493,3HSNB@3699,COG5021@1,KOG0168@2759,KOG0170@2759
Ec32 ortholog description expressed unknown protein
Ec32 ortholog Ec-25_002610.1
EC 2.3.2.26
Cds size 4416
COG Functional cat. O
Best tax level Brassicales
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko01000,ko04121
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348736.9438014-UTR-Ecto-sp6_S_contig102:188760..189627 1682348736.9438014-UTR-Ecto-sp6_S_contig102:188760..189627 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig102 188761..189627 +
1682348736.9553313-UTR-Ecto-sp6_S_contig102:189766..189870 1682348736.9553313-UTR-Ecto-sp6_S_contig102:189766..189870 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig102 189767..189870 +
1682348736.9648054-UTR-Ecto-sp6_S_contig102:190250..190430 1682348736.9648054-UTR-Ecto-sp6_S_contig102:190250..190430 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig102 190251..190430 +
1682348736.973339-UTR-Ecto-sp6_S_contig102:191245..191403 1682348736.973339-UTR-Ecto-sp6_S_contig102:191245..191403 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig102 191246..191403 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348736.9895122-CDS-Ecto-sp6_S_contig102:191403..191406 1682348736.9895122-CDS-Ecto-sp6_S_contig102:191403..191406 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 191404..191406 +
1682348737.0016372-CDS-Ecto-sp6_S_contig102:192007..193423 1682348737.0016372-CDS-Ecto-sp6_S_contig102:192007..193423 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 192008..193423 +
1682348737.01101-CDS-Ecto-sp6_S_contig102:193468..194086 1682348737.01101-CDS-Ecto-sp6_S_contig102:193468..194086 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 193469..194086 +
1682348737.020526-CDS-Ecto-sp6_S_contig102:194188..194465 1682348737.020526-CDS-Ecto-sp6_S_contig102:194188..194465 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 194189..194465 +
1682348737.0298376-CDS-Ecto-sp6_S_contig102:195588..195676 1682348737.0298376-CDS-Ecto-sp6_S_contig102:195588..195676 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 195589..195676 +
1682348737.039664-CDS-Ecto-sp6_S_contig102:196237..196747 1682348737.039664-CDS-Ecto-sp6_S_contig102:196237..196747 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 196238..196747 +
1682348737.0569794-CDS-Ecto-sp6_S_contig102:197423..197558 1682348737.0569794-CDS-Ecto-sp6_S_contig102:197423..197558 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 197424..197558 +
1682348737.0671816-CDS-Ecto-sp6_S_contig102:197862..197971 1682348737.0671816-CDS-Ecto-sp6_S_contig102:197862..197971 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 197863..197971 +
1682348737.076365-CDS-Ecto-sp6_S_contig102:198751..198907 1682348737.076365-CDS-Ecto-sp6_S_contig102:198751..198907 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 198752..198907 +
1682348737.0857985-CDS-Ecto-sp6_S_contig102:199457..199646 1682348737.0857985-CDS-Ecto-sp6_S_contig102:199457..199646 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 199458..199646 +
1682348737.1008072-CDS-Ecto-sp6_S_contig102:200132..200858 1682348737.1008072-CDS-Ecto-sp6_S_contig102:200132..200858 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 200133..200858 +
1682348737.1136353-CDS-Ecto-sp6_S_contig102:201348..201537 1682348737.1136353-CDS-Ecto-sp6_S_contig102:201348..201537 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 201349..201537 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig102.845.1
>prot_Ecto-sp6_S_contig102.845.1 ID=prot_Ecto-sp6_S_contig102.845.1|Name=mRNA_Ecto-sp6_S_contig102.845.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1472bp
MTIPGMVDEDSPAGPGVRIQLMSTRREMPPPPLSSAAAASAAAAAGGGSG SQQQQQQASASQGQGRQGGGGLAARRPVAAGGLAQRRPLPAPPGTARGGA SAAAAGRPNGRGNKAPATAAAAAAAAAGAATSSSGSPAPRAAAAKAGTAA AAAAKAAKAARATTGSSGCAGSSTKEPRSRRIVRGRRTPSSSSGTGGAGA AAGGGSRPVTRGRRSGTTGEGDGSATAGHVSSSSSNSKRKRGEDSGAAGG GRGSSTVATCADEAATPAAAAPAAATQGRTLRARRTRSSSTSASSSSAAA AATAGTAATSSRGRVSTRRGVAAAATIGMAAPAPPVADPSSSTPSTRKAS SSSPRGSGSGSGSSSSGGGGGRRKSYAAPSPPPSAAAAAASASTAAEAAK GGGVAARASSSSSSSHKRRRVSSPPSTSAAAEGAAAAGSGRSKRTTGTAT AGATGVVRSGGGGGGGSPRRSSRSAAAAAAAAAKSKRGGTTNKLPAAAAA GGDGGTAAVASSTCAGSAKTKRGSKSKSKKTPSPRQRQQPQQQKQPAKRV SGRASTGGGGRNSSRRVASPGTATTSPRRGSTPVASRTSGSSSRGGGSGL PATAGGEGWQPPWRAGGAATAAAAAAAAAAAAAAAASAGSSSAAGGGSST RNRSSSSSSSSSKLPILQWTLRYHWPDTDGGVSGGGGGGGSSGSRKRNSK GRAGGAVEENRGKGRGHNNNSSTEEAGEEEAALALGGRQGGAEVVVAGGD ADGTVVRRYTEVDFTNGELPSGATMFEAVQMLMLKHARETAGGEVPTTSS GDRFPHRSMPMPREQWGKTITLEFSPRSCSSHSAKPLPASSAACASPGVA AGRAASAAPPASASGGPAGSGAAASSSSGGGGSGASAAAGPLPPAEASSS SSAPAGPSSAAGSAADWPSRRVGGGGGGSGSGGGGSGGRRDRKGKDKKEK PLEVLELPRVLAPGATPLDARLAVVHGLMEKGGGGGIGAGFRFGEHLCLL SALQAVCEEWSGLRRSLLSQGSVAGDGDLPDPHPSVLHDLARRCIVSGLQ RKQACNPLALCTGSLPSWCIGLPREFPSLFSLETRLSLLRKTAFGMARAV AHVQEKAKNVEDIPAVAAPLRSAAGTARAGGGVLRRVGGGGGADSPASLA MPLPELLRQLGRLGRLTVLLSRDSILEMATFLFGLLVNGQQPPPPPPQPQ QQQQQQQQQQSSQRLPPPSSAPAPAGGGEGSSQQRRRRQQQQQLQLQQQQ QQQQQQQQQQQQQQQRRRISAGSTPASGSSGGASASASAARRRSAMAAAA TAAAAATGGGGGGGSRSPYSLGSGGGAMMGRARLYGEEQEEDVGEDEEGE EEEEEEEEGWNALDVEEEDDDDEEEEGDEDYEGYHHHGEAYHDEEVDEEE EEDELDEVVLDEEDLAAAEEGATAAEAAAVATNGGGGASREGWGGDDEGR DSRREGGSVDVGGGDHDGSGVG back to top mRNA from alignment at Ecto-sp6_S_contig102:188761..201537+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig102.845.1 ID=mRNA_Ecto-sp6_S_contig102.845.1|Name=mRNA_Ecto-sp6_S_contig102.845.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=12777bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:188761..201537+ (Ectocarpus species6 EcLAC_371)AAGAACGCCAAGAGCAAGAAGAAGGCGGCGGCGACGGCGTCGTCCCGGCG
GGGGCCGCCGAGGCCGACCTCGAAGCTGGCGCAGTTTTTGGTGGGTTCGG
GGTCCTCGTCGTCCTCGTCCCCGTCGTCTAGCAGCAGCGTCAGCGACGTC
GCCGATGATGATGATGGTGATGATAGTAGCCCCAGGGGTAGGGGCGGCGG
CGGCGGTGCTGCCGGGACGAGACGTAGCGCCAGCGGTGGGAGAAAGAGCG
ACGAGGGAGGCGGGAAGAAGAGTGTCGCGGGGAAGAAGCGGAAGGGGGCT
CCGTCGCCTCGAGGACGGGAGGGGGGTGCCTCGTCACCGTCACCGTCTTC
GTCTAGAAAAGGGAAGGGAGCGGGGAGCGGGAGAGGTGGCTGGGCCGCCG
CCGCCGCCGCCGTGTCAATGGCAGAAGGGGGTGCCGGCCACCACGAGGAA
GAGAAGGAGGAGTCGCTGGACATCGAGGACGCTTGTTCCCAAGCTACCCT
GGCAGCTGCTGCTGCTGCTGCTGCTGCTGCGGGGGCGTCGGCTGGCGGCG
GCAGCAGCAGCAGCGGGGGAGAAGCAAAGGGCGAGGAAGAGGTGGCGGAA
GGCGCCGGCGCCGGCGCCGGCGGCTACTCCTCTCGCCTCCGAAACAAGCG
GCGGAAGGTAGTAGCCGGTAGTGGGGGCTCCTCAGCCGTGGCTGCTTCTC
CTGCCCCCACCGGCCGTGCTGCTGCGGCCGCCACCGGGGCCGGAGGCGCG
GCGAAGAAGGGCGGCAAGAAGACCATGAGGGGAAGCAAGGGGAAGAGGGC
GGCGGCGGCGGTGGCATCGACGTCGGCGTCGTCTTCTGGGTTGCCGCGGC
TAAGGCCCGGAACGGAG GTGCGCTTCGCGTGACGATTAAGATTCGGTCAT
GTGCGCTTGTTATGCATCACCCCACCATCACCATCACCATTTTTTTTTTT
TTTTTTTTTTTTTCTTCGCTCGCATGTGTCGTCGGCCTGTTTTTCGCACG
TGCCAGGTCTTCTCGTGCTTCCGGATGGCGGGAGGGGCCCGGGGGCCGGG
AACTGTCTGGTACATGGGGAGCGTCAAGGTCGCCCACAGGGACGGCACGG
TCGATGTCAG GTATTGTACAAGCTAGCTGAGTTTTTGCTGTTGGTGCTGT
TGTTTGGTGGTGGCCGTGGTAACAATGTGCTGCGGTCTTGTCTCTCTGTC
TCGGTGTGTGTGTCTCTCTTGTCACTTTCTCTCTCTGTTTCTCCCTCCCT
CTGTCTTCTCTTTCAATATATATATGCCTCTCTCTATGCCTTTCTGCCTG
TCTGTCTCTTTCTCTCGAGCGTGAACGAATATGTGTGGGTGTTGTATTTT
CAGCCACGCATTTGTAGCTTCGAGAACGTGGAAGAAGGTGAAGACGGGGG
TAAAATCCAAACAAATAGGATGTGTTGCCATCCCCCCCATCTCCTGACCA
CCCATCTCCTACCATATGTGCGCATCATTTTTTTTTGAAGGTACGAGGAC
GAGGAAGTACGCAAGAACATCCCGAGAAGCCACCTGACGACCACGCTCCC
GTCGGTGGTCTCCGACGGCCAGTCTACGGAGATCCGGGGATGCACGCTGT
GGAGCTCCGGGGGTGGCAGCGGCGGCGGCGGCGATGGCGGGAGGAGCGTG
GTGAAGCAGGAGGCTGGGGG GTCCGAGGAGGAGGTGAATGGAGGGGCCCC
GAGGAATCGCGGGCATCTCTCGCGACGGCCGCGGGACCCCCCCCACCCAC
GAAGGTCCCGGGCTGCGGGCGGAGCAACAGCGGCGGCGGCTGCGACGGCG
ACAGCCGGCGGCGGCGATCGAAGAGAAGCGGGAGGGGAGGGGGCGGGGGC
GGGGACCGGGGCGGTGGATACGCTTAGCGAGAGGTTCGCGCAGCTCGCGG
CGCTAGAAGGTCGCGCGGAGATGCAGAGAGCGGCGGCAGCGGTGGCGGCG
GCGGCTGCGGCGGCTGCTGCCGCCACCTCGTCGCACAGGCCCGGGGGTTC
ATCGAGGGCGAACAACCCGCCTCCTCCTCCGGCCTCCTCTTCCGGCGGCG
GCGGCGGCGGCGGTGGTGGTTCTTCGGCCGTCCGTCAGGCACAGGCGGCG
TCGAGGGTGGCCATAGAACGCGCCCGCGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTTCTGCTTCTGACTCTTCGACGTCTCGTCCGTCGGCGGCGG
GGGCCAACACCGCCAGCGGCAAGACTTCTTCTTCTCGCGGTGGTGGCAGC
AGCGGTGGCGCCAGCGATGCTGCAAGGGCCGCCGCCGCCGGCCGCAGCGG
TAGCGGGCCGAGCTCCCGGAACCTCGACGCCGCCGCCGCGCTTGAGCGAG
AGCTGTCGCTGCTGCGGCACGCGCGGGCGGCGCAGGCCGCCCAGGCGGCG
GCGGGAGGGTTTGCTGGAGGCGGAGCCGGCGGCGGCAGCGGAGGGCCGCT
GGGCGTGGGCGCGTGGCCGCCGGAGCTTCTTGAAGCTGCTCAGGCGGCCG
GGCTTACCTTGCCGCCGGGAGCGGGCAGGGTCAGCGGTGGCGGCGGTGGC
GGCGGTGGCGGAGGTGGTGGCCACCCGCATGGGGGACCCCCGGGGGGGCA
CAGGATCGGTGGAGGGGCCAGGGCCGGCGGTACTATTCTACGG ATG GTGA
GCAGCGGCCCGCCATTTTTGGCTAGGGTTGGCCCCGCTTTGGAGCGTTGT
TGTGCTTCCTCGTGTCATGTCGTCGTGAAggttgtaggggtggccGGTGA
TGTACGGtGCATGGCGGGGGAGTTCGTTTTGTTCCACAACGGTGTAGGTT
GAGTCGAAATTTGTTTGACTTCCCGGCAGGGTAACAGCCTTATTTTTGCG
GAAGTTCGATTTGGTCATGAAGTCCCAACGTTTTGTTAACAGCGCCGGGG
ACTTGAGTCATAAATTTTTTTGCCTCGTTTTTCCTTTGAGTTGCAGCCCA
AATCGACCCCCGCCCACCACCCCCAATCAATCAACGCCCCGTCCTCTGGA
GGACGCGTGGTTTCAAAGGCCTAACAACTAAGTTATTCACAATATGAATA
GATCACGCGCGGTTATTAATGCTTTTACAGCAAAGGTATGTAGGAACATG
AGTACCTCCCCCCCCCCCGTCGGAACAATGCCCCGTACTCCCGAGGACGC
ACGGTCAACGATCTGACAACTGGAGGCATGCATGCAAACCGTGAGTACCG
CCCCCCCACACCGCGCCTTTCGTTCCCCTCGTTACCCCTGGCCGCAGACA
ATCCCGGGGATGGTGGACGAGGACTCCCCTGCGGGGCCGGGGGTCCGGAT
CCAGCTCATGTCCACGCGCAGAGAGATGCCCCCTCCGCCTTTGTCATCGG
CAGCGGCGGCTTCGGCGGCGGCGGCGGCGGGGGGGGGGTCGGGCTCGCAG
CAGCAGCAGCAGCAGGCGTCTGCGTCGCAGGGCCAAGGGAGGCAGGGGGG
GGGGGGTCTAGCTGCGCGCCGACCGGTGGCGGCGGGCGGTCTCGCTCAGC
GTCGGCCCTTGCCTGCGCCGCCTGGTACAGCTCGTGGTGGAGCTTCGGCA
GCGGCGGCCGGCCGCCCCAACGGCAGGGGCAACAAGGCACCGGCTACTGC
GGCGGCGGCGGCGGCGGCGGCGGCGGGCGCAGCAACGTCTTCCTCGGGGT
CCCCGGCCCCCCGCGCGGCCGCGGCAAAGGCCGGCACCGCTGCTGCTGCT
GCTGCAAAAGCTGCAAAAGCTGCTCGCGCGACTACCGGTAGCAGCGGTTG
CGCGGGAAGCAGTACCAAGGAGCCTCGAAGTCGTCGCATTGTCCGCGGCC
GCAGGACTCCTTCTTCTTCTTCCGGCACCGGCGGGGCGGGGGCGGCGGCA
GGCGGGGGTTCTCGCCCGGTGACCCGGGGACGGCGAAGCGGGACTACCGG
AGAAGGTGACGGTTCGGCAACGGCCGGTCACGTATCGTCGTCGTCGTCAA
ACTCAAAGAGAAAGCGAGGAGAAGATTCTGGCGCCGCCGGAGGGGGAAGG
GGATCAAGCACCGTCGCTACTTGCGCGGACGAAGCCGCGACACCAGCGGC
GGCAGCGCCTGCGGCGGCGACGCAAGGAAGGACGTTGCGGGCCAGAAGAA
CTCGTTCCTCGTCCACCTCGGCTTCGTCGTCGTCGGCAGCTGCTGCGGCA
ACGGCGGGTACAGCGGCGACGTCGTCGAGGGGGCGGGTCTCGACTCGACG
GGGTGTGGCCGCCGCTGCTACTATCGGAATGGCCGCTCCCGCCCCCCCTG
TCGCCGATCCTTCTTCTTCTACCCCGTCGACACGCAAGGCTTCGTCGTCG
TCTCCGAGAGGTAGCGGTAGCGGTAGCGGTAGCAGCAGCAGCGGTGGGGG
GGGGGGGCGCAGGAAGTCCTACGCCGCTCCGTCGCCGCCGCCTTCGGCGG
CGGCAGCGGCGGCTTCTGCGAGCACCGCCGCTGAAGCGGCGAAAGGCGGG
GGCGTGGCAGCGCGGGCGTCATCATCATCATCGTCGTCGCACAAGAGACG
GCGAGTCTCGTCCCCGCCGTCGACGTCCGCCGCAGCGGAAGGCGCGGCGG
CGGCGGGCAGCGGGAGGTCGAAGCGAACAACGGGGACGGCGACTGCGGGG
GCGACGGGGGTGGTCCGCAGCGGCGGCGGCGGCGGCGGCGGTAGCCCGAG
GAGAAGCTCCCGC GTCGTACGTGGTTCATCGTCTTCTGCGTCGCCGCCCC
CTTCGAAGTCCGCCGCCGCCGCAGCAGCAGCGGCAGCGAAGTCGAAGAGA
GGTGGCACCACCAACAAGCTCCCTGCTGCTGCTGCTGCTGGCGGTGACGG
CGGTACGGCTGCCGTTGCGTCGTCAACATGTGCGGGTTCTGCGAAGACGA
AGCGGGGGAGCAAGAGCAAGAGCAAGAAGACCCCGTCGCCGCGTCAACGG
CAGCAGCCGCAGCAGCAGAAGCAGCCGGCTAAGAGGGTAAGCGGCAGGGC
TAGTACGGGCGGCGGTGGGCGCAACAGTAGCAGGCGGGTAGCAAGTCCCG
GTACCGCTACGACATCTCCGCGTCGAGGTAGTACCCCGGTAGCCAGCCGC
ACCAGCGGCAGCAGCAGCCGTGGCGGCGGGAGCGGACTCCCCGCCACCGC
CGGCGGCGAGGGGTGGCAGCCACCGTGGCGTGCTGGGGGCGCTGCTACAG
CTGCCGCTGCTGCTGCTGCGGCGGCGGCGGCGGCAGCGGCGGCGGCTTCG
GCGGGGAGCAGCAGCGCCGCCGGCGGGGGCTCGTCGACCAGAAACCGGTC
TTCGTCCTCGTCCTCGTCTTCGAGCAAGCTCCCTATCCTGCAGTGGACAC
TGAGGTATCACTGGCCGGACACCGAC GTGGCGGCAGCAGCCTCCGCCGCC
GCCGCCGATTCGCCCGCTGCCAACACCGGCACGGCCGCGGTCGGACCCGG
CTCCGCTGCCTCGTCGTCCGCGTTGGAGGGCGGTGTCAGCGGCGGCGGCG
GCGGCGGCGGCAGCAGTGGTAGCCGCAAGAGAAATAGCAAGGGGCGAGCC
GGGGGAGCCGTGGAGGAGAATCGGGGAAAGGGAAGGGGGCACAACAACAA
CAGCAGCACGGAGGAGGCGGGAGAGGAGGAGGCAGCTCTGGCACTGGGAG
GGAGGCAAGGAGGAGCCGAGGTGGTGGTGGCCGGGGGCGACGCAGATGGG
ACTGTCGTACGGAGGTATACGGAGGTGGACTTCACGAACGGGGAGCTTCC
TTCCG GTGAGAGACTCGTACCCGCCGCCGCCGTCCCCCCACCCCACCCCC
CGGGACAACACGGACCCCGCGAAGTTGCCGGCTACACCTACAGCAGCGTG
TGTGATGCTGCGAGCTTGTTTTTCGCACGGAAACGGTTGTTGGTGTTGGC
GTTGGTGTTGCATTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTCTTCTACCGGGAATCATCCCGGTCTCTTCTCGATGTGCCTTCCG
ACGTCCGTACCGGCCCAACTGACTCGGAACGCCTTCCATGGTCACAACAG
TCCCGCTACTTTTGTGCGTACCCCCTCAAGGGTTACTACACTAACTGCTT
TGCAAGGTGGTTCTATGCCCGACTGTCGCCACGAGGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTCTTCACACGTTACGAAGCTGTGCCGGTCTCCTC
TCTGTACGTTCTAGTATCCGTACCGGTGCAACAAACGCAGACGGCTTCGG
TGGTGATAGGCCAACCACCCCAAAAACGGGACACATTTTCTAGATTTCAA
AGAACAGAGGTGTGTGTGTGTGTGTATGTGTGTGTTCGTCCCATCTAATC
TGGCGGGTGTGTGTGTGTGTGTTCGTCCCATGTAATCTGGCGGGTGTGTG
TGTGTGTGTGTGTTCGTCCCATCTAATCTGGCGGGTGTGTGTGTGTGTGT
GTTCGTCCCATGTAATCTGGCGGGTGTGTGTGTGTGTGTGTGTTCGTCCC
ATGTAATCTGGCGGGTGTGTGTGTGTGTGTGTGTTCGTCCCATCTAATCT
GGCGGGTGTGTGTGTGTGTGTGTTCGTCCCATCTAATCTGGCGGCGGCCA
GCCTACTGCCCTTTGCCTTTCGGTGTGTGTCTATATCTCACCGATCAGCC
GGGGTTGAAGCAGAGGAAGGTAACACACAGGAGCGAGGAACGACCGAAAA
TTCAATGTTTTCGTTTTCGTTTTTTAtTTTTCTGAATTATTGCACAATAA
AATCCATCTCTATCCACAGAAAAGAGTCTATTGGGATAAAATGGTAAATG
TAAGTCAGAAGTCGTTTTTTGTCTTGTAATCTTGCGGCGTCTCCACACCA
TGCCGGCGACCGCTCACGTGCGCGACAGGCGCGACAATGTTCGAGGCTGT
CCAGATGCTGATGCTGAAGCACGCTCGAGAGACGGCCGGGGGCGAAGTCC
CGACAACCAGTAGCGG GTACGTGTGTACTTGTGTGCGTATGTGCGCCCTT
ATTTCCTTCCCTGCGTGTGTTTTTTTTTATCCTCCTCGGCACGTGGTTAT
TTGTTGTCGTCTCTTGTTTGTAGTGGGGCGGGCCGCTTGATGCTGTTGTC
ACGTCGAACACGAGACGGAGCCCCCCCCCCCCAAAAAAAAAAAAAAAAAA
AAAAAAAAGGTGATGACGAGAGGGGGCACCCACGGTGAAGTGTAGGCTGA
CTCGCTGACTCGTTCGCGTTCTCTCTGTCTGTGTGTGCTTTCCTGTGGCT
GTGTGCGTTGACTGTCTCTCTCTCGGCCTCGGACTCGGACTTGCCTCTGC
CTTTCTGCCTCTGCTTGTCTGCCTCTGCTTGTCTGCCTCTGCCTGTCTGC
CTCTGCTTCTCTGCCTCTGCTTGCCTGCCTCTGCTTGCCTGCCTCTGCTT
GCCTGCTTGTGCCTGTGTTTCACCCCTCGTCTCTCCCCCCTCGCCCCCCT
GCCGCCGCGGCATCGATGCATCTCTCACTTCGTGGATAACCCCCAAAAAT
CTCGCTCAAAATCACACGCGCGCGCAGGGACCGTTTCCCGCATCGCTCCA
TGCCAATGCCGCGAGAGCAGTGGGGGAAGACCATCACGTTGGAGTTCTCC
CCCCGCTCCTGTTCCTCGCATTCTGCGAAGCCCCTGCCCGCCTCCTCTGC
CGCGTGTGCATCCCCCGGCGTCGCCGCCGGAAGAGCCGCTAGCGCGGCAC
CCCCCGCTAGCGCCAGCGGCGGCCCCGCTGGTTCTGGAGCTGCGGCGTCT
AGCAGCAGCGGTGGCGGCGGCAGCGGCGCCTCCGCCGCCGCGGGTCCTTT
GCCGCCGGCGGAGGCGTCTTCTTCTTCCAGTGCCCCCGCAGGTCCTTCTT
CCGCTGCCGGCTCGGCGGCGGATTGGCCATCAAGGCGTGTGGGCGGTGGT
GGCGGCGGTAGCGGTAGCGGTGGTGGCGGTAGCGGTGGTCGCAGAGACAG
GAAGGGCAAGGACAAGAAGGAGAAGCCCTTGGAGGTGCTGGAGCTCCCCC
GCGTGCTCGCCCCTGGGGCCACGCCCCTCGACGCTAG GTGCCGTGCTGCT
TTTGTTGTTGTTGTTGTTGTTGGCCATGTTGCTATTGTTCTGATTGTAGG
TGGTGGTGGTGTTGTTGTTTGTTGTTGTCGTTGTTGCTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTTGTTGTTGTTGTAGGTGCCGGTGCCGGTGCCG
GTGTTTGTTGCTGTTGTTGTTCTGGTGGTGTTGTTGTTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTG
CTGTTGTTGTTGTTGTTGTTGTTTGTTGTTGTTGTAGGTGTCGGTGCCGG
TGCCGGTGTTTGTTGCTGTTGTTGTTCTGGTGgtggtagtTGTTTGTTGT
TGTTCTTCGCACAGATTCAATTGTTTGGCGTTTCTGtggttgtaggtgcc
GCCGTTGTTGTGCTTGTTGCTGGCGTTGTCGTTAAAGTGGTTGTTTGTGA
GATGTGGTTGCCAGTGTTGTACTCCTCTGCACTGCGGTTCGCTATTGGCT
CTTGCTATTGTTTTGTGGAGGAGGCGGAGCGACAGCACACTTGGGAGAAC
TTTGCCATCCATCAGTTCAGCACCAGTGAGTGGTACCATCGACGTCGCGG
TGGCCCCGATACTGTTGGCAAATCTAACCCTTCTTTCTCGTGTTCTTTTT
GCTGCACACCCAGGCTCGCCGTTGTGCACGGGCTGATGGAGAAGGGAGGA
GGCGGCGGAATCGGTGCTGGGTTCCGTTTCGGCGAACACTTGTGCCTCCT
GAGCGCCTTGCAGGCGGTTTGTGAGGAGTGGAGCGGGCTTCGAAGGAG GT
GGGATAGTTGTCGTTGTCGTTGTTGTTGTTGTTGTTGCTGCTGCTGCTGT
TACTGTTGCCGCTAAGGCTGCTAAGGCTGGCTGGCTGGCTTGCAGGCTCC
AATCGATGAATGATAATAAGTCGATGATGGATACGCCAAAAGTGGCAACT
TTGACTCGTTGGTTCTGCCAGAGCCATCACAGCATCACACATGGGTGATA
TTGTAGGTCTCCCGTTCTCTCGAGATGATGCCTTGTCAATGGTCTTATTG
TACAACTATGGCGTGCAAAACATGAGTACGCCCCCCCCCCCCTACCCTCC
AGTCTCTTGAGCCAGGGCAGCGTCGCCGGGGACGGTGATCTCCCGGACCC
CCACCCTTCGGTTCTGCACGATCTAGCGAGGCGTTGCATCGTTTCGGGAC
TGCAGCGGAAG GTTTCGCGTCAGGCAAGACGGAGAGAGAGACAGAGACAG
AGAGATCATTTTTTTCTTCTTTTTTTTCTTCGTGATACTGTCGTTGACTT
CTATTGACTTAGGGTGACCCTTCGGGTCATATTTTCGTATACCTTGTTTG
GGTACGTTAGTCTGTGACCACGGGAATCGACCCCGTCAACTGTTAAGACT
AATATAGTCCGGACAGAAGAAGGTACTGGGCAGGCAGAACGGATCGGTTT
TTGATGTGAAGACAACAACAACTGTATGCCATCTATTTTACGGACGTCGG
TCGGCCCTTGCAACGCCTTTTCTTTGGTACAATGTTTTTGACGCACGCCG
GCCGGGGTCACGCAGACGTGACGCTATTTAGGATGAGTGCTGTCTTGCCC
GAGAAGAACGAAAAGACATAAATAAGATGAGAAAATTTAAAACGGGGGGG
GAAATGCTGCTGCAAAGTAACGTGTGTCGGGACTGACTTGCGATATCCAT
CTCTTCCCACAGAATTAGAGCCGACTGACTTTCTTTGTTTTATGTTATAT
TTGCCGGGATTTTGATTTTGCCATCGCCCGAAGTTTTACACGAAGCAGGC
GTGCAACCCGTTGGCGCTGTGCACGGGGTCCCTCCCCTCTTGGAACGAAC
GTTTATTGATAACTTTTTGTTTTTTTCACGGCACTCACGACTAATGTTTT
TGCGTTTTTTTCTCCTGTTCTTCTCTGTTTTTCGCGTGTGCTGGTCGTTG
TTGATTTCTTGTTCCTTGCGATGGTTCGGGGCTACTCCAAGCAGGCGTGC
AACCCGTTGGCGCTGTGCACGGGGTCCCTCCCATCCTGGTGCATAGGCCT
CCCGAGGGAGTTCCCCTCGCTCTTCTCCCTCGAGACCCGCCTGTCGCTGC
TCCGGAAGACGGCCTTCGGGATGGCCAGAGCCGTGGCCCACGTTCAG GTG
AGGACGTGCGGCGTGCAGGCTATTTTTTCCTGCGGCCGCCGCTGTCGCCG
CCGTTATTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTCCTTTGTGT
GACTATTGCCGCGGCTGTGGGTATTTTTTCAAGGATAACTCGCTATCCTT
TGCGGGTGACATACCGGTGCCACCACAGGACGGTCGACGCTAGATAGAAG
TAGAAGTACCCTGATACGCAGCTAGAAGTCTCCTGCAGCAGTAGCGGGCA
CATTGGAGTGTCATCATTTTACGGTACGCGTTGATTTCCGCCCCCGTTTA
CCCGTGGGAAACGTACAGTAGCCTGGACCGGCGGCAACCCGGCGTGTCGC
TCCTTCCCGGCGCTGTAGGGATTCCCAAGGAAGGTCAATGGTCTAAAAAC
GGCATGCGTTTACATGGGCACACACACACACCCTTGCCCCGCCGCCACTG
ACTCATTTCTCTCTCTCTCCCTCTCTCCCTCCTTTCCGTTTCTCCCCCCC
TTCTCCCTCTCTCCATCGCCCCCCCTCTCTCTTTGGCCGATCTACAGGAA
AAGGCCAAGAATGTCGAGGACATCCCCGCGGTCGCTGCTCCGCTCCGATC
GGCGGCGGGTACGGCGCGAGCGGGCGGAGGCGTGCTGAGACGAGTGGGTG
GCGGCGGCGGGGCGGACTCGCCGGCCTCCTTGGCCATGCCCCTGCCGGAG
CTGCTGCGGCAGCTCGGGAGGCTCGGGCGTTTGACG GTCAGTGTTGTTGC
TGTTGTCATTGACGTCGTCGTGGTTGCTGTTGTCGTTGTTGTTGTCACAT
ATTATTGGTGGTGGTTTATATTTCGTGGTATTTGTGATTGGTATTGGTGA
TTGCTGCTGGTGTTGTTGTCGTTGTTATATCTGTTGTTGTTGCGGTTGGT
GGTGGTGGTGTTGGTCGTGTTTAATGCCCGTCCGTACGTATGCATAGATA
TGACCCTCTGGTCCACTTAATTTTTCGCCCCTCTTTCACACCTGTTGACC
TACCATGGTATGGTCGGACTCGACTTGATTTGTCTTCTTTTTGCCGGCCC
TGGCGGATGTGTTTCCTTTTTTCTCCTGATAGCCAACACTGCTGTGAAAA
AAGAAGCTGTTCGTGCTCCACATCTTGAACCTGCTAGAGTTAACTTGCTC
CTGCACATGTCAACACGAAACTGGTTGTGGGTCTCTCAAAAGTTTGAATT
TTTATTATTTTGCTTTGAGCAGGTGCTCCTCTCGCGAGACTCCATCCTGG
AGATGGCCACGTTCCTCTTCGGCCTCCTCGTCAACGGACAGCAGCCGCCA
CCGCCACCACCGCAGCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GTCGTCCCAAAGACTACCGCCTCCATCTTCGGCGCCAGCGCCTGCGGGTG
GCGGAGAAGGCTCCTCGCAGCAGCGGCGACGGCGACAGCAACAGCAGCAA
CTGCAATTGCAACAACAACAGCAGCAGCAACAGCAGCAGCAACAGCAACA
ACAGCAGCAGCAGCAACGGCGGAGGATTTCTGCGGGTTCTACCCCCGCGA
GCGGGTCCAGCGGCGGTGCTAGCGCGAGCGCTTCTGCCGCCCGCAGGCGC
TCGGCCATGGCGGCAGCTGCTACGGCTGCTGCAGCAGCAACTGGTGGTGG
TGGTGGTGGTGGCTCCCGATCGCCGTACTCTTTAGGAAGCGGAGGGGGTG
CCATGATGGGGCGGGCGCGATTGTACGGCGAAGAGCAGGAAGAGGATGTT
GGGGAAGATGAGGAGGGTGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGTG
GAATGCTCTCGATGTTGAGGAGGAGGATGATGATGATGAGGAGGAGGAGG
GCGACGAAGATTACGAGGGTTACCACCATCATGGGGAGGCGTATCATGAC
GAGGAGGTAGATGAGGAGGAGGAGGAGGATGAGCTGGATGAGGTGGTG GT
GAGTTTGCTGCTGTTGCTGCTGTTGTTGTTGCGGTTGTTGTATTTGTTAC
TGTTGTTGTTGCTGTTGTTGTTGTTGCTGCTGTTGCTGCTGTTGTTGTTG
TTGCTGCTGTTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GTTGTTGCTGTCGTTGTTGTTGTTGTTGTTGTTGCGGTTGTTGTATCTGT
TACTGTTGTTGTTGTTGTTGTTGTATCTGTTACTGTTGTTGTTGTTGTTG
TTGTTGTTGCTGCTGTTGTTGTTGCTGTTGTTGCTGCTGCTTTTGTTGTT
GCTGGTGTCGTCGCTGCTGTAGCTGCTGCTACTGCTGTTGCTGCGTTCGG
TACCACGAGCGCGAACGCTAATCGTTTCGCAAGGGACGCGGCTTTAGATT
TTCCTCTCTTTTTTCAACTACCCATTAATCGATCCCCCCCCCCCTGCTCT
CCCGCCTGTACCACCTACGCGCAAACACACGACAAAAGTTGGACGAAGAG
GACCTTGCAGCAGCAGAAGAAGGGGCAACAGCGGCAGAAGCAGCAGCGGT
GGCGACAAATGGTGGAGGAGGAGCGAGCCGGGAGGGTTGGGGTGGTGATG
ACGAGGGCCGAGACAGCCGGCGGGAGGGGGGCTCTGTGGATGTGGGGGGT
GGAGACCACGACGGGTCCGGAGTTGGC back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:188761..201537+
>mRNA_Ecto-sp6_S_contig102.845.1 ID=mRNA_Ecto-sp6_S_contig102.845.1|Name=mRNA_Ecto-sp6_S_contig102.845.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=4416bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:188761..201537+ (Ectocarpus species6 EcLAC_371) ATGACAATCCCGGGGATGGTGGACGAGGACTCCCCTGCGGGGCCGGGGGT CCGGATCCAGCTCATGTCCACGCGCAGAGAGATGCCCCCTCCGCCTTTGT CATCGGCAGCGGCGGCTTCGGCGGCGGCGGCGGCGGGGGGGGGGTCGGGC TCGCAGCAGCAGCAGCAGCAGGCGTCTGCGTCGCAGGGCCAAGGGAGGCA GGGGGGGGGGGGTCTAGCTGCGCGCCGACCGGTGGCGGCGGGCGGTCTCG CTCAGCGTCGGCCCTTGCCTGCGCCGCCTGGTACAGCTCGTGGTGGAGCT TCGGCAGCGGCGGCCGGCCGCCCCAACGGCAGGGGCAACAAGGCACCGGC TACTGCGGCGGCGGCGGCGGCGGCGGCGGCGGGCGCAGCAACGTCTTCCT CGGGGTCCCCGGCCCCCCGCGCGGCCGCGGCAAAGGCCGGCACCGCTGCT GCTGCTGCTGCAAAAGCTGCAAAAGCTGCTCGCGCGACTACCGGTAGCAG CGGTTGCGCGGGAAGCAGTACCAAGGAGCCTCGAAGTCGTCGCATTGTCC GCGGCCGCAGGACTCCTTCTTCTTCTTCCGGCACCGGCGGGGCGGGGGCG GCGGCAGGCGGGGGTTCTCGCCCGGTGACCCGGGGACGGCGAAGCGGGAC TACCGGAGAAGGTGACGGTTCGGCAACGGCCGGTCACGTATCGTCGTCGT CGTCAAACTCAAAGAGAAAGCGAGGAGAAGATTCTGGCGCCGCCGGAGGG GGAAGGGGATCAAGCACCGTCGCTACTTGCGCGGACGAAGCCGCGACACC AGCGGCGGCAGCGCCTGCGGCGGCGACGCAAGGAAGGACGTTGCGGGCCA GAAGAACTCGTTCCTCGTCCACCTCGGCTTCGTCGTCGTCGGCAGCTGCT GCGGCAACGGCGGGTACAGCGGCGACGTCGTCGAGGGGGCGGGTCTCGAC TCGACGGGGTGTGGCCGCCGCTGCTACTATCGGAATGGCCGCTCCCGCCC CCCCTGTCGCCGATCCTTCTTCTTCTACCCCGTCGACACGCAAGGCTTCG TCGTCGTCTCCGAGAGGTAGCGGTAGCGGTAGCGGTAGCAGCAGCAGCGG TGGGGGGGGGGGGCGCAGGAAGTCCTACGCCGCTCCGTCGCCGCCGCCTT CGGCGGCGGCAGCGGCGGCTTCTGCGAGCACCGCCGCTGAAGCGGCGAAA GGCGGGGGCGTGGCAGCGCGGGCGTCATCATCATCATCGTCGTCGCACAA GAGACGGCGAGTCTCGTCCCCGCCGTCGACGTCCGCCGCAGCGGAAGGCG CGGCGGCGGCGGGCAGCGGGAGGTCGAAGCGAACAACGGGGACGGCGACT GCGGGGGCGACGGGGGTGGTCCGCAGCGGCGGCGGCGGCGGCGGCGGTAG CCCGAGGAGAAGCTCCCGCTCCGCCGCCGCCGCAGCAGCAGCGGCAGCGA AGTCGAAGAGAGGTGGCACCACCAACAAGCTCCCTGCTGCTGCTGCTGCT GGCGGTGACGGCGGTACGGCTGCCGTTGCGTCGTCAACATGTGCGGGTTC TGCGAAGACGAAGCGGGGGAGCAAGAGCAAGAGCAAGAAGACCCCGTCGC CGCGTCAACGGCAGCAGCCGCAGCAGCAGAAGCAGCCGGCTAAGAGGGTA AGCGGCAGGGCTAGTACGGGCGGCGGTGGGCGCAACAGTAGCAGGCGGGT AGCAAGTCCCGGTACCGCTACGACATCTCCGCGTCGAGGTAGTACCCCGG TAGCCAGCCGCACCAGCGGCAGCAGCAGCCGTGGCGGCGGGAGCGGACTC CCCGCCACCGCCGGCGGCGAGGGGTGGCAGCCACCGTGGCGTGCTGGGGG CGCTGCTACAGCTGCCGCTGCTGCTGCTGCGGCGGCGGCGGCGGCAGCGG CGGCGGCTTCGGCGGGGAGCAGCAGCGCCGCCGGCGGGGGCTCGTCGACC AGAAACCGGTCTTCGTCCTCGTCCTCGTCTTCGAGCAAGCTCCCTATCCT GCAGTGGACACTGAGGTATCACTGGCCGGACACCGACGGCGGTGTCAGCG GCGGCGGCGGCGGCGGCGGCAGCAGTGGTAGCCGCAAGAGAAATAGCAAG GGGCGAGCCGGGGGAGCCGTGGAGGAGAATCGGGGAAAGGGAAGGGGGCA CAACAACAACAGCAGCACGGAGGAGGCGGGAGAGGAGGAGGCAGCTCTGG CACTGGGAGGGAGGCAAGGAGGAGCCGAGGTGGTGGTGGCCGGGGGCGAC GCAGATGGGACTGTCGTACGGAGGTATACGGAGGTGGACTTCACGAACGG GGAGCTTCCTTCCGGCGCGACAATGTTCGAGGCTGTCCAGATGCTGATGC TGAAGCACGCTCGAGAGACGGCCGGGGGCGAAGTCCCGACAACCAGTAGC GGGGACCGTTTCCCGCATCGCTCCATGCCAATGCCGCGAGAGCAGTGGGG GAAGACCATCACGTTGGAGTTCTCCCCCCGCTCCTGTTCCTCGCATTCTG CGAAGCCCCTGCCCGCCTCCTCTGCCGCGTGTGCATCCCCCGGCGTCGCC GCCGGAAGAGCCGCTAGCGCGGCACCCCCCGCTAGCGCCAGCGGCGGCCC CGCTGGTTCTGGAGCTGCGGCGTCTAGCAGCAGCGGTGGCGGCGGCAGCG GCGCCTCCGCCGCCGCGGGTCCTTTGCCGCCGGCGGAGGCGTCTTCTTCT TCCAGTGCCCCCGCAGGTCCTTCTTCCGCTGCCGGCTCGGCGGCGGATTG GCCATCAAGGCGTGTGGGCGGTGGTGGCGGCGGTAGCGGTAGCGGTGGTG GCGGTAGCGGTGGTCGCAGAGACAGGAAGGGCAAGGACAAGAAGGAGAAG CCCTTGGAGGTGCTGGAGCTCCCCCGCGTGCTCGCCCCTGGGGCCACGCC CCTCGACGCTAGGCTCGCCGTTGTGCACGGGCTGATGGAGAAGGGAGGAG GCGGCGGAATCGGTGCTGGGTTCCGTTTCGGCGAACACTTGTGCCTCCTG AGCGCCTTGCAGGCGGTTTGTGAGGAGTGGAGCGGGCTTCGAAGGAGTCT CTTGAGCCAGGGCAGCGTCGCCGGGGACGGTGATCTCCCGGACCCCCACC CTTCGGTTCTGCACGATCTAGCGAGGCGTTGCATCGTTTCGGGACTGCAG CGGAAGCAGGCGTGCAACCCGTTGGCGCTGTGCACGGGGTCCCTCCCATC CTGGTGCATAGGCCTCCCGAGGGAGTTCCCCTCGCTCTTCTCCCTCGAGA CCCGCCTGTCGCTGCTCCGGAAGACGGCCTTCGGGATGGCCAGAGCCGTG GCCCACGTTCAGGAAAAGGCCAAGAATGTCGAGGACATCCCCGCGGTCGC TGCTCCGCTCCGATCGGCGGCGGGTACGGCGCGAGCGGGCGGAGGCGTGC TGAGACGAGTGGGTGGCGGCGGCGGGGCGGACTCGCCGGCCTCCTTGGCC ATGCCCCTGCCGGAGCTGCTGCGGCAGCTCGGGAGGCTCGGGCGTTTGAC GGTGCTCCTCTCGCGAGACTCCATCCTGGAGATGGCCACGTTCCTCTTCG GCCTCCTCGTCAACGGACAGCAGCCGCCACCGCCACCACCGCAGCCGCAG CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCGTCCCAAAGACTACCGCC TCCATCTTCGGCGCCAGCGCCTGCGGGTGGCGGAGAAGGCTCCTCGCAGC AGCGGCGACGGCGACAGCAACAGCAGCAACTGCAATTGCAACAACAACAG CAGCAGCAACAGCAGCAGCAACAGCAACAACAGCAGCAGCAGCAACGGCG GAGGATTTCTGCGGGTTCTACCCCCGCGAGCGGGTCCAGCGGCGGTGCTA GCGCGAGCGCTTCTGCCGCCCGCAGGCGCTCGGCCATGGCGGCAGCTGCT ACGGCTGCTGCAGCAGCAACTGGTGGTGGTGGTGGTGGTGGCTCCCGATC GCCGTACTCTTTAGGAAGCGGAGGGGGTGCCATGATGGGGCGGGCGCGAT TGTACGGCGAAGAGCAGGAAGAGGATGTTGGGGAAGATGAGGAGGGTGAG GAGGAGGAGGAGGAGGAGGAGGAGGGGTGGAATGCTCTCGATGTTGAGGA GGAGGATGATGATGATGAGGAGGAGGAGGGCGACGAAGATTACGAGGGTT ACCACCATCATGGGGAGGCGTATCATGACGAGGAGGTAGATGAGGAGGAG GAGGAGGATGAGCTGGATGAGGTGGTGTTGGACGAAGAGGACCTTGCAGC AGCAGAAGAAGGGGCAACAGCGGCAGAAGCAGCAGCGGTGGCGACAAATG GTGGAGGAGGAGCGAGCCGGGAGGGTTGGGGTGGTGATGACGAGGGCCGA GACAGCCGGCGGGAGGGGGGCTCTGTGGATGTGGGGGGTGGAGACCACGA CGGGTCCGGAGTTGGC back to top