prot_Ecto-sp6_S_contig10.537.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig10.537.1
Unique Name	prot_Ecto-sp6_S_contig10.537.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	404

Homology

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BLAST of mRNA_Ecto-sp6_S_contig10.537.1 vs. uniprot
Match: D8LSN5_ECTSI (Hypothetical leucine rich repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN5_ECTSI)

HSP 1 Score: 350 bits (899), Expect = 5.430e-116
Identity = 211/221 (95.48%), Postives = 214/221 (96.83%), Query Frame = 0

Query:  158 LSDNKYLLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSSRWEDATLEDDSKTIFSLFSVDGNEGMTPADSRAPSADPPFAGAXXXXXXXXXXXXXXXXXXXXXXXXXXERDRANKPWVAKVLDSMAEAWHVVVPIADDVTSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLALMPLLGMVRVVLAGLAWCARLCTFPPGTVCCLCV 378
            LSDNKYLLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSSRWEDATLEDDSKTIFS+FSVDGNE +TPADSRAPSADPPFAGA XXXXXXXXXXXXXXXXXXXXXXXXX R RANKP VAKVLDSMAEAWHVVVPIADD TSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLALMPLLG+VRVVLA LAWCARLCTFPPGTVCCLCV
Sbjct:  120 LSDNKYLLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSSRWEDATLEDDSKTIFSIFSVDGNEAVTPADSRAPSADPPFAGAGXXXXXXXXXXXXXXXXXXXXXXXXX-RARANKPRVAKVLDSMAEAWHVVVPIADDATSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLALMPLLGIVRVVLAALAWCARLCTFPPGTVCCLCV 339

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BLAST of mRNA_Ecto-sp6_S_contig10.537.1 vs. uniprot
Match: A0A6H5JMX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX8_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 3.230e-99
Identity = 233/241 (96.68%), Postives = 236/241 (97.93%), Query Frame = 0

Query:    1 MSEAGTEIQESHGGDRDALLTLYHCTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPPGLGELGALEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDNKYLLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSSRWEDATLEDDSKTIFSLFSVDGNEGMTPADSRAPSADPPFA 241
            MSEAGTEIQESH GDRDALL LYH TGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIP GLGELGALEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSDNK+LLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSSRWEDATLEDDSKTIFS+FSVDGNEG+TPADSRAPSADPPFA
Sbjct:    1 MSEAGTEIQESHAGDRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPAGLGELGALEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSDNKHLLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSSRWEDATLEDDSKTIFSIFSVDGNEGVTPADSRAPSADPPFA 241

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BLAST of mRNA_Ecto-sp6_S_contig10.537.1 vs. uniprot
Match: A0A6H5JME9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME9_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 2.520e-67
Identity = 113/119 (94.96%), Postives = 116/119 (97.48%), Query Frame = 0

Query:  286 MAEAWHVVVPIADDVTSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLALMPLLGMVRVVLAGLAWCARLCTFPPGTVCCLCVLGCCWRCLNFSKDGPRCNGSTATRLL 404
            MAEAWHVVVPIADD TSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLALMPLLG+VR+VLA LAWCARLCTFPPGT+CCLCVLGCCWRCLNFS DGPRCNGSTATRLL
Sbjct:    1 MAEAWHVVVPIADDATSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLALMPLLGIVRIVLAALAWCARLCTFPPGTLCCLCVLGCCWRCLNFSMDGPRCNGSTATRLL 119

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BLAST of mRNA_Ecto-sp6_S_contig10.537.1 vs. uniprot
Match: A0A6B0WES6_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6B0WES6_9CHLR)

HSP 1 Score: 93.2 bits (230), Expect = 1.140e-16
Identity = 43/78 (55.13%), Postives = 52/78 (66.67%), Query Frame = 0

Query:    7 EIQESHGGDRDALLTLYHCTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPPGLGELGALEHL 84
            E     G DR+AL+ LYH TGGP+W N + W SD PL  WYGVTT+S GRVV LEL  N+L G +P  LG+L  L+ L
Sbjct:  357 EADGDAGTDREALVALYHATGGPNWRNDANWLSDEPLRRWYGVTTDSGGRVVRLELSSNDLSGELPAELGQLSELQWL 434

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BLAST of mRNA_Ecto-sp6_S_contig10.537.1 vs. uniprot
Match: A0A6L7WC15_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7WC15_9CHLR)

HSP 1 Score: 93.2 bits (230), Expect = 1.260e-16
Identity = 43/78 (55.13%), Postives = 52/78 (66.67%), Query Frame = 0

Query:    7 EIQESHGGDRDALLTLYHCTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPPGLGELGALEHL 84
            E     G DR+AL+ LYH TGGP+W N + W SD PL  WYGVTT+S GRVV LEL  N+L G +P  LG+L  L+ L
Sbjct:  357 EADGDAGTDREALVALYHATGGPNWRNDANWLSDEPLRRWYGVTTDSGGRVVRLELSSNDLSGELPAELGQLSELQWL 434

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BLAST of mRNA_Ecto-sp6_S_contig10.537.1 vs. uniprot
Match: A0A524RR67_9CYAN (Uncharacterized protein n=2 Tax=Aphanocapsa feldmannii TaxID=192050 RepID=A0A524RR67_9CYAN)

HSP 1 Score: 87.4 bits (215), Expect = 2.360e-15
Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 0

Query:   15 DRDALLTLYHCTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPPGLGELGALEHL 84
            DRD L+ LY+ T G  WH  + W S++P++EWYGVTT+S+GRV  L+L  N L G IPP LG L  LE+L
Sbjct:   88 DRDVLIELYNATNGDGWHRNANWKSNKPISEWYGVTTDSSGRVTELDLSENALTGRIPPALGNLTNLEYL 157

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BLAST of mRNA_Ecto-sp6_S_contig10.537.1 vs. uniprot
Match: A0A6L8E604_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L8E604_9CHLR)

HSP 1 Score: 88.2 bits (217), Expect = 3.690e-15
Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 0

Query:   15 DRDALLTLYHCTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPPGLGELGALEHL 84
            DR+AL+ LYH TGGP+W N + W SD PL  WYGV T+  GRVV LEL  N+L G +P  LG+L  L+ L
Sbjct:  280 DREALVALYHATGGPAWRNDANWLSDEPLRRWYGVATDPGGRVVRLELSSNDLSGELPAELGQLSELQWL 349

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BLAST of mRNA_Ecto-sp6_S_contig10.537.1 vs. uniprot
Match: A0A6N8V3M1_9BACT (BIG2 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6N8V3M1_9BACT)

HSP 1 Score: 88.2 bits (217), Expect = 5.460e-15
Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 0

Query:    2 SEAGTEIQESHGGDRDALLTLYHCTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPPGLGELGALEHL 84
            S AGT  + +   DR+ L+ LY  T GP+W N + W ++ PL +WYGVTT++AGRVV L L YN L G +PP +G L  L+HL
Sbjct:  278 SHAGTGEECAPLTDREILVRLYEATDGPNWDNNTNWLTEAPLRQWYGVTTDAAGRVVRLVLAYNGLNGVVPPEIGGLANLQHL 360

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BLAST of mRNA_Ecto-sp6_S_contig10.537.1 vs. uniprot
Match: D7FUH5_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH5_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 5.510e-15
Identity = 38/70 (54.29%), Postives = 45/70 (64.29%), Query Frame = 0

Query:   15 DRDALLTLYHCTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPPGLGELGALEHL 84
            DR+AL+ L+  T G  W     WG+   L  WYGV  N+ GRVV L L  NNLQGS+PP LG LGAL+HL
Sbjct:    5 DRNALIALFQATRGAEWRKSDNWGTSEGLGTWYGVDVNAEGRVVKLSLYNNNLQGSLPPQLGNLGALQHL 74

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BLAST of mRNA_Ecto-sp6_S_contig10.537.1 vs. uniprot
Match: A0A6H5KQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP2_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 5.570e-15
Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 0

Query:   15 DRDALLTLYHCTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPPGLGELGALEHL 84
            DR+AL++L+  TGG  W  R  W +D  L  W GV  N  GRVV L+L+YNNLQGSIPP LG+L AL  L
Sbjct:    5 DREALVSLFRSTGGAGWIRRDNWDTDADLATWNGVNVNVQGRVVNLDLQYNNLQGSIPPELGKLAALRAL 74

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig10.537.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig10.537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LSN5_ECTSI	5.430e-116	95.48	Hypothetical leucine rich repeat protein (Partial)...	[more]
A0A6H5JMX8_9PHAE	3.230e-99	96.68	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JME9_9PHAE	2.520e-67	94.96	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6B0WES6_9CHLR	1.140e-16	55.13	Uncharacterized protein (Fragment) n=1 Tax=Chlorof...	[more]
A0A6L7WC15_9CHLR	1.260e-16	55.13	Uncharacterized protein n=1 Tax=Chloroflexi bacter...	[more]
A0A524RR67_9CYAN	2.360e-15	54.29	Uncharacterized protein n=2 Tax=Aphanocapsa feldma...	[more]
A0A6L8E604_9CHLR	3.690e-15	55.71	Uncharacterized protein (Fragment) n=1 Tax=Chlorof...	[more]
A0A6N8V3M1_9BACT	5.460e-15	49.40	BIG2 domain-containing protein n=1 Tax=Gemmatimona...	[more]
D7FUH5_ECTSI	5.510e-15	54.29	Leucine rich repeat protein n=1 Tax=Ectocarpus sil...	[more]
A0A6H5KQP2_9PHAE	5.570e-15	55.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 12..188 e-value: 3.7E-44 score: 152.9
None	No IPR available	PANTHER	PTHR27000:SF525		coord: 97..177 coord: 11..97
None	No IPR available	PANTHER	PTHR27000:SF525		coord: 56..120
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 97..177 coord: 11..97
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 56..120
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 333..356
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 357..404
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..332
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 14..178
None	No IPR available	TMHMM	TMhelix		coord: 334..356

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig10	contig	Ecto-sp6_S_contig10:1215662..1226137 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig10.537.1	mRNA_Ecto-sp6_S_contig10.537.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig10 1215662..1226163 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig10.537.1 ID=prot_Ecto-sp6_S_contig10.537.1|Name=mRNA_Ecto-sp6_S_contig10.537.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=404bp
MSEAGTEIQESHGGDRDALLTLYHCTGGPSWHNRSGWGSDRPLNEWYGVT
TNSAGRVVALELRYNNLQGSIPPGLGELGALEHLHLTNNELHGAIPPELG
RLHSLTDLRLYCNHLSGILPPELGNLHALKKLVVYSNDLSGTVPPELEGL
RALEELLLSDNKYLLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSS
RWEDATLEDDSKTIFSLFSVDGNEGMTPADSRAPSADPPFAGAGGGAGAT
GGGGATEKQRERQGGRRRRERDRANKPWVAKVLDSMAEAWHVVVPIADDV
TSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLALMPLLG
MVRVVLAGLAWCARLCTFPPGTVCCLCVLGCCWRCLNFSKDGPRCNGSTA
TRLL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf