mRNA_Ecto-sp6_S_contig98.18754.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig98.18754.1
Unique NamemRNA_Ecto-sp6_S_contig98.18754.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig98.18754.1 vs. uniprot
Match: D7G0W6_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W6_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 7.620e-75
Identity = 123/132 (93.18%), Postives = 123/132 (93.18%), Query Frame = 3 
Query:  213 MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQARRFALFFLPAKMAKRMDQQAKKKELEELRAKLKVAREEDAAGDTPASK 608
            MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQ         PAKMAKRMDQQAKKKELEELRAKLKVAREEDAAGDTPASK
Sbjct:    1 MRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQ---------PAKMAKRMDQQAKKKELEELRAKLKVAREEDAAGDTPASK 123
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BLAST of mRNA_Ecto-sp6_S_contig98.18754.1 vs. uniprot
Match: A0A6S9GFW4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GFW4_HETAK)

HSP 1 Score: 178 bits (451), Expect = 1.300e-52
Identity = 92/134 (68.66%), Postives = 110/134 (82.09%), Query Frame = 3 
Query:  180 MDGQRDKDRRPMRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQARRFALFFLPAKMAKRMDQQAKKKELEELRAKLKVAREED 581
            MD Q+++ R   RLPPEVNR +YVRNLPFKI+A+EMYDIFGKYGAIRQIR+GD+ DT+GTAFVVY+DIYDAK AVDHLSGFNVCGRYLIVLYYQ         P +MAK+MDQ+ +++ELEEL+AK    R+ D
Sbjct:    1 MDPQQNR-RANARLPPEVNRVLYVRNLPFKITAEEMYDIFGKYGAIRQIRIGDKPDTKGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLIVLYYQ---------PTRMAKKMDQERERRELEELKAKYLAERQND 124
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BLAST of mRNA_Ecto-sp6_S_contig98.18754.1 vs. uniprot
Match: A0A835YN30_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN30_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.040e-51
Identity = 90/124 (72.58%), Postives = 102/124 (82.26%), Query Frame = 3 
Query:  204 RRPMRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQARRFALFFLPAKMAKRMDQQAKKKELEELRAKLKVARE 575
            RR  RLPPEVNR +YVRNLPFKI+ADEMYDIFGKYGAIRQIRLGD+ DTRGTAFVVY+DIYDAKAAVDHLSGFNVCGRYLIVLYYQ+          K  KR+D+  K++E+EE++AK  V  E
Sbjct:    7 RRTGRLPPEVNRILYVRNLPFKITADEMYDIFGKYGAIRQIRLGDKPDTRGTAFVVYEDIYDAKAAVDHLSGFNVCGRYLIVLYYQS---------TKALKRVDEMKKRREIEEIKAKFGVGGE 121
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BLAST of mRNA_Ecto-sp6_S_contig98.18754.1 vs. uniprot
Match: A0A7S2C985_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C985_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.560e-51
Identity = 88/121 (72.73%), Postives = 102/121 (84.30%), Query Frame = 3 
Query:  216 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQARRFALFFLPAKMAKRMDQQAKKKELEELRAKLKVAREE 578
            RLPPEVNR +Y+RNLPFKI+++EMYDIFGKYGAIRQIR+GD+ DTRGTAFVVY+DIYDAK AVDHLSGFNVCGRYLIVLYYQA         A+M KR+D   K++ELEEL+AK  V+ EE
Sbjct:   12 RLPPEVNRVLYIRNLPFKITSEEMYDIFGKYGAIRQIRVGDKPDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLIVLYYQA---------ARMEKRIDNDKKRRELEELKAKFNVSGEE 123
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BLAST of mRNA_Ecto-sp6_S_contig98.18754.1 vs. uniprot
Match: A0A7S2DAY0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAY0_9STRA)

HSP 1 Score: 175 bits (443), Expect = 2.280e-51
Identity = 89/123 (72.36%), Postives = 101/123 (82.11%), Query Frame = 3 
Query:  216 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQARRFALFFLPAKMAKRMDQQAKKKELEELRAKLKVAREEDA 584
            RLPPEVNR +YVRNLPFKI+++EMYDIFGKYGAIRQIR+GD+ DTRGTAFVVY+DIYDAK AVDHLSGFNVCGRYL+VLYYQA R         M KRMD   K+KELEEL+ K  V+ +E A
Sbjct:   14 RLPPEVNRVLYVRNLPFKITSEEMYDIFGKYGAIRQIRVGDKPDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLVVLYYQASR---------MQKRMDNDKKRKELEELKQKYNVSADEVA 127
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BLAST of mRNA_Ecto-sp6_S_contig98.18754.1 vs. uniprot
Match: A0A7S2S8J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8J7_9STRA)

HSP 1 Score: 172 bits (435), Expect = 3.870e-50
Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 3 
Query:  177 AMDGQRDKDRRPMRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQARRFALFFLPAKMAKRMDQQAKKKELEELRAKLKVARE 575
            +MD      R   RLPPEVNR VYVRNLPFKISA+E+YDIFGKYGA+RQ+RLGD+ DTRGTAFVVY+DIYDAK AVDHL+GFNVCGRYL+VLYYQA         +KM +R+D Q K++ELEEL+ K  +  E
Sbjct:    3 SMDSGAGSRRGNARLPPEVNRVVYVRNLPFKISAEEIYDIFGKYGALRQVRLGDKPDTRGTAFVVYEDIYDAKNAVDHLNGFNVCGRYLVVLYYQA---------SKMQERIDNQRKRQELEELKKKYNIQTE 126
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BLAST of mRNA_Ecto-sp6_S_contig98.18754.1 vs. uniprot
Match: R1DMS8_EMIHU (RRM domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DMS8_EMIHU)

HSP 1 Score: 171 bits (432), Expect = 1.090e-49
Identity = 87/121 (71.90%), Postives = 100/121 (82.64%), Query Frame = 3 
Query:  204 RRPMRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQARRFALFFLPAKMAKRMDQQAKKKELEELRAKLKV 566
            R  MRLPPEVNRA+YVRNLPFKI+A+EMYDIFGK+GAIRQIRLG+  DTRGTAFVVY+DIYDAK AVDHLSGFNVCGRYL+VLYYQ           KM KR+D + ++KEL E+RAKL +
Sbjct:    7 RASMRLPPEVNRALYVRNLPFKITAEEMYDIFGKFGAIRQIRLGNASDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLVVLYYQQ---------TKMQKRLDTEREQKELAEMRAKLGI 118
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BLAST of mRNA_Ecto-sp6_S_contig98.18754.1 vs. uniprot
Match: A0A067D1A1_SAPPC (Pre-mRNA branch site p14-like protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D1A1_SAPPC)

HSP 1 Score: 169 bits (429), Expect = 2.320e-49
Identity = 87/117 (74.36%), Postives = 98/117 (83.76%), Query Frame = 3 
Query:  216 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQARRFALFFLPAKMAKRMDQQAKKKELEELRAKLKV 566
            RLPPEVNR +YVRNLPFKIS+DEMYDIFGKYGAIRQIRLG   DTRGTAFVVY+DIYDAK AVDHLSGFNVCGRYL+VLYYQA R         ++K+MD QAK++EL EL+A+  V
Sbjct:   14 RLPPEVNRVLYVRNLPFKISSDEMYDIFGKYGAIRQIRLGVNADTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLVVLYYQANR---------VSKKMDVQAKQQELAELKARYGV 121
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BLAST of mRNA_Ecto-sp6_S_contig98.18754.1 vs. uniprot
Match: A0A0M0JX52_9EUKA (Pre-mRNA branch site p14-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JX52_9EUKA)

HSP 1 Score: 168 bits (425), Expect = 1.190e-48
Identity = 85/123 (69.11%), Postives = 100/123 (81.30%), Query Frame = 3 
Query:  198 KDRRPMRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQARRFALFFLPAKMAKRMDQQAKKKELEELRAKLKV 566
            + R+ +RLPPEVNRA+YVRNLPFKI+A+EMYDIFGK+GAIRQIRLG+  DTRGTAFVVY+DI+DAK AVDHLSGFNVCGRYL+VLYYQ           KM KR D + + KEL E+RAKL +
Sbjct:    4 RQRQQLRLPPEVNRALYVRNLPFKITAEEMYDIFGKFGAIRQIRLGNAADTRGTAFVVYEDIFDAKTAVDHLSGFNVCGRYLVVLYYQQ---------TKMQKRQDTEREMKELAEMRAKLGI 117
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BLAST of mRNA_Ecto-sp6_S_contig98.18754.1 vs. uniprot
Match: A0A7S3SDL9_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SDL9_9SPIT)

HSP 1 Score: 167 bits (424), Expect = 1.740e-48
Identity = 84/121 (69.42%), Postives = 99/121 (81.82%), Query Frame = 3 
Query:  198 KDRRPMRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQARRFALFFLPAKMAKRMDQQAKKKELEELRAKL 560
            + R  +RLPPEVNRA+YVRNLPFKISA+EMYDIFGK+GA+RQ+RLG   DTRGTAFVVY+DIYDAK AVDHLSGFNVCGRYL+VLYYQ           KM KR+D + +++EL E+RAKL
Sbjct:   11 RQRATLRLPPEVNRALYVRNLPFKISAEEMYDIFGKFGALRQVRLGSAPDTRGTAFVVYEDIYDAKNAVDHLSGFNVCGRYLVVLYYQQ---------TKMQKRLDTEREQRELAEMRAKL 122
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18754.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0W6_ECTSI7.620e-7593.18RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6S9GFW4_HETAK1.300e-5268.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YN30_9STRA1.040e-5172.58RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2C985_9STRA1.560e-5172.73Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2DAY0_9STRA2.280e-5172.36Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2S8J7_9STRA3.870e-5066.17Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
R1DMS8_EMIHU1.090e-4971.90RRM domain-containing protein n=1 Tax=Emiliania hu... [more]
A0A067D1A1_SAPPC2.320e-4974.36Pre-mRNA branch site p14-like protein n=4 Tax=Sapr... [more]
A0A0M0JX52_9EUKA1.190e-4869.11Pre-mRNA branch site p14-like protein n=1 Tax=Chry... [more]
A0A7S3SDL9_9SPIT1.740e-4869.42Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig98contigEcto-sp6_S_contig98:175232..180126 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score235.3
Seed ortholog evalue1.7e-59
Seed eggNOG ortholog2880.D7G0W6
Preferred nameSF3B6
Model size967
KEGG rclassRC00632,RC00680
KEGG koko:K01464,ko:K12833
KEGG ReactionR02269,R03055,R08227
KEGG Pathwayko00240,ko00410,ko00770,ko00983,ko01100,ko03040,map00240,map00410,map00770,map00983,map01100,map03040
KEGG ModuleM00046,M00352
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0001701,GO:0001824,GO:0001825,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0005689,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009653,GO:0009790,GO:0009792,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0030532,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048646,GO:0048856,GO:0070013,GO:0071011,GO:0071013,GO:0071704,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1990904
Exons6
EggNOG free text desc.RNA splicing
EggNOG OGsKOG0114@1,KOG0114@2759
EC3.5.2.2
Cds size432
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig98.18754.1prot_Ecto-sp6_S_contig98.18754.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig98 175411..179770 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350602.8389888-UTR-Ecto-sp6_S_contig98:175231..1754101682350602.8389888-UTR-Ecto-sp6_S_contig98:175231..175410Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig98 175232..175410 +
1682350602.914843-UTR-Ecto-sp6_S_contig98:179770..1801261682350602.914843-UTR-Ecto-sp6_S_contig98:179770..180126Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig98 179771..180126 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350602.8560262-CDS-Ecto-sp6_S_contig98:175410..1754431682350602.8560262-CDS-Ecto-sp6_S_contig98:175410..175443Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 175411..175443 +
1682350602.8683987-CDS-Ecto-sp6_S_contig98:176494..1765351682350602.8683987-CDS-Ecto-sp6_S_contig98:176494..176535Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 176495..176535 +
1682350602.877002-CDS-Ecto-sp6_S_contig98:177307..1773771682350602.877002-CDS-Ecto-sp6_S_contig98:177307..177377Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 177308..177377 +
1682350602.8852203-CDS-Ecto-sp6_S_contig98:177978..1781431682350602.8852203-CDS-Ecto-sp6_S_contig98:177978..178143Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 177979..178143 +
1682350602.8935156-CDS-Ecto-sp6_S_contig98:178746..1788081682350602.8935156-CDS-Ecto-sp6_S_contig98:178746..178808Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 178747..178808 +
1682350602.9022496-CDS-Ecto-sp6_S_contig98:179709..1797701682350602.9022496-CDS-Ecto-sp6_S_contig98:179709..179770Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 179710..179770 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig98.18754.1

>prot_Ecto-sp6_S_contig98.18754.1 ID=prot_Ecto-sp6_S_contig98.18754.1|Name=mRNA_Ecto-sp6_S_contig98.18754.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=144bp
MDGQRDKDRRPMRLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIR
LGDRQDTRGTAFVVYDDIYDAKAAVDHLSGFNVCGRYLIVLYYQARRFAL
FFLPAKMAKRMDQQAKKKELEELRAKLKVAREEDAAGDTPASK*
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mRNA from alignment at Ecto-sp6_S_contig98:175232..180126+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig98.18754.1 ID=mRNA_Ecto-sp6_S_contig98.18754.1|Name=mRNA_Ecto-sp6_S_contig98.18754.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4895bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:175232..180126+ (Ectocarpus species6 EcLAC_371)
GCGTCAACGCTGGGAGAGAATAGCAAGGGTTTGTTGGCGGTATCGCCAGG
GTCTCCTGCTACTTCTTCCTAGGGTTGAGGCTTGCTTATAGTTTGGAGCC
TCAGATTGGTGGGCGCCTTCCATCGTAAAACGAGAGAGAACAAGACCGCG
ACCTCTGGCTCTGGCAAAAGCAGCGAGCTATGGACGGCCAAAGGGACAAA
GACAGGAGACCGGTGAGGACACCAGGACACCCGAAGAAGACGAGCAAAGG
ATCGTCATGGATGTTTCGCATTCTCGTAGTCGGGGGGATAGACGTATACG
GAAGCAAGGAGATAAGGGTTGTGGATTGTTTTGGTGCTACTACTTGTAGT
GTTGTCCAGAGCGGTTGCTGTGTGCGCGGGAGAGGATCTCGCCGCCATAT
TGTCGGCCAACGCCACATGGCATTGGACAGGGCCACCACATTCAATGCCA
AACGATCAAGTTAAACTACAATCGAGTTTCTCAAGGGCGGAGGAGAGACA
CCCTTTTGCAATCCGTTCATTCGTGTTTTGTTTTAAGAATCAAACTTGAG
GGAAGCCGGGTGTGCAGCAAGCAGTGATGTAGATTCAGAGCAGCCGTAGC
CTCCCCCCCGCCTTATGCCCTCGTGTGTGCGTGCACGAAAGGCACCCCTA
CAGCCGCAAGCACTTGTAATATAACACAAGTCGAACCATAGGACGTATAT
GAGTTCTATCAGTCACCTTCCCGGGCTCGAGTAGTTCCCAATACTAGAAA
GAAGGGACCTCATTTCCTCAGAACAGGCGTGCGTAGGACTACCCCCCGCC
CTCCCGGTAGCGTTGTACAGAGTAGCCTTTGGACCCGCTGAGACCGTCGT
CTCTCCATTTGTCAGCCGGTGAACGCGAGCGATTTTGGTCGGAGAAATAC
ACACGATTGTAGCCCGGGCGATGTTATTCTTAAAAAAAATACACCGCACA
TCTCTTCTCATCGGCGGGGTCCTGCTTTGGGATGAGGCTTTTGGGCGGCT
TGCACCGCCACTTGGCGGGTTAAACGGCCTCTCATTCATCTACCGCACGG
TGGACGTTCAGGAGGCTTTATTGAGTGCGCGTAGTGGAGAGCCTCTGGCT
CGCTTCCTTTGTTGGTCAGGCCTCTGTTTTCCATCTGTGCCTTATGACGA
CTTGTGTTGGCCCGATCTCTTCCCCTCTGTCCAGCCGTCCGCCCGCCTGA
TGTTCCATGTACCCACCTGTTCATTCCGTGCTGGCTATCTCCTCCCCCCC
CCCCTTCCCTCAGATGCGGCTCCCGCCAGAAGTGAACAGAGCCGTCTATG
TCAGGTGAGCTAATTATCTTTCTTCTTCCCGTTCATGGAGTTCTTGATCT
AATTGGCGTTTTGTTCTGAGGTGTGGCCTTTTGTAGCCCCGGCCCGTTTA
TCTGGGTTTCTTGATCCACCATTGGGGGGGGGGCTGTTTAGTGCCGTTAT
GTGCCTAGATAATTGACCGGCGCTATGCGGGACACAAGACACTTTTCAAA
ACACAGAACGACTTGGTGATTCCCTCACTCTTTGCCAGCCGACTAAACGG
GCCCTACACCGGACATCACCACTACTCAACCGGCACTAAGAAGGGTCCTC
TACTGTAGCACCGTATACCGTATACCGTATGCATGCATGGCGTACAAGGC
GCGAAAGCGGGCTCGAAGGCGAGCCTTTCGCCTCGGAATTGTGGTGCAGA
TAAGCGGCGCGTTATTCTGGGATGGTTGCTTGTAGGGTAGGCACGTACAG
CAGACTGACTCCCTGTTTGGTGCTTGTTGGTTGGCGAGTTCCTTCACCCC
GTGTTGTGGAATTGACACCAAATGGCTAAAAAATTGAACAAGCATCAGGA
GAGGCTGGATTGCTCTTGAACATGATAGTCATCGTTATTCGTCGATCAGT
TTGTGTCCCCGTGCACGAAATTGTGTTCATGTTCGCCCGGAAATCCGCCG
GATATCACACGCACATGGGCACATTTTTCAACAGTACCTGTTTCAACACG
TAGAAATCCCGTCCCTGACCTTTCCGTTCCTCGCCACTGGAAATGGGCGC
TGCTCCGATTTTTGGCTCTCGTTCAGAAATCTCCCTTTCAAGATTTCCGC
GGACGAAATGTACGACATATTTGGCAAGTACGGCGCCATCCGCCAGGTAC
GTTCGGTCATGGAATCTACCACGACCTGCCACAACACGTTCCACCCTGTA
CCATATTGTATCACCCTATTCCGACCCAAAAAGAAAACGTAGAGGAGCGC
GTGTAAACTGGTGCTGCTGGCTTCCTTAGTCCTGCCAGTCAAGGGTGGAT
GGTTGTCGGGCAGTACATATGGTTTACTTTCAAGGAGCCAGGCCTCCCTC
CCAACGCCGCCTGAAACACCCGGAAACCGCCCAATTGAATTGGCGTTATG
CAGCCGGTGCACAAACATTAATGCATAGTTTTACTCGTCATTTGGATCGA
ACTTAAAAATACATTCCGCGCTCAGTTTCATGCAGTGTTTCCCCAAGGTT
CAGCAGGAAACAACAAAGCTTCCGAACACCGCTTGAAACACCCGAAACCG
CCTTAGAGATAACGTTCTTTTTTCTCGGTCAGACGGGACCATCGACTTTG
TTTTGTAACGGAGTCCCCTTCCATATCTTCAACCGGTGTTATCGCGTTCG
GCGCGTACCCGGTCCACGACAGCTAGCGTAGGAGTGCGTTCCCTAACGGT
ATCCCTGTTTTCCGACAAGTTTTGACCGTGTTCTTCCGGGTTGGCAGATC
CGACTGGGAGACAGGCAGGACACCAGGGGGACGGCCTTCGTGGTGTACGA
TGACATCTACGACGCAAAGGCGGCGGTGGACCACCTGAGCGGCTTCAACG
TGTGCGGGCGGTACCTCATCGTCCTCTACTACCAGGCAAGACGATTTGCA
CTTTTTTTTTTAGTTTGTCCTTTGGTTCCTTTTGTTTTCCTGTTCCCTTT
TGTTGGGTGGTTTTCTTTAAAGTTCACCTCTGGCTGAGCCTCTGCTTGCT
CGTGTGTTCTCCACCCAGGACCATGATCATAATATGGTGGTGGTGGTGGT
GGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTTTAGTGGTTCCTTTTC
AATGGTGGGTTGCTTCTTGTGGGGTTGGACGATACGTCTTGATGTGTCTC
TCGTTTGCACCTCCTCGTCGTGTACGGCGTGCATGTATCGGAGAGGCTTA
CAACCGCTTACCACTCTGTTTGATGTATTCGGGGCGTTCGGATGTAAATT
CGAATATCCAAATGGCCCCTGTGTTAACAGAGTTGTATCAGCATGTGAAG
GGGATCGGAGCCGTTACACGCAGACAAATGAGCTTTTTCACACTACGTTA
GCCATCGAGTTGAAGGTCATGCGCGTGTGGACTTCGTTGTTGTCGCCCCC
CCTGAATCTCCCGTCCGCGAGTACGCTGTGAACCGCACGGCGCTCAACGT
CTCGGCTTACCTACCGCCCACGCTGACGAAAACGATTTTTTGTTGTCAAT
TTTTGTGTTGGCCAGCCCGCAAAGATGGCGAAGCGAATGGACCAGCAGGC
GAAGAAGAAGGAGCTCGAGGAGCTCAGGTAAAAATCAGATACCCATTACC
TGTTGGGTTGCCGTATGCTCACGCGGCATGTTCAGTGTGACTTACTTGTC
GGTAGGTTGCTAAAAAAAAACCTCGGCTCTAGAAAACACGTCAACGACTT
GGAGCCACCGCCGGAGAGAACAACGTATGATATGGCACAAGCAAGACACA
AGCCCTTGTAGCGTGACATCGGCACGTAGGTGTCCCCACGATTTGATTCC
CACGGGAGAACGTGGAAGAGCTAGGCAGCACGCGAGAAAGAGAGAGAGAG
ATAAAAAGAGAGAGAGAGCGAAATAGAGAGAGAGTGCGAAATAGAGAGAG
GGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGCGCCTACCCAGTCCTAAG
AGGCCACCCCAAGACGGCATCCGTTGCATCCCTGCGAAGTACCACTATGG
ATATCTGCTGATTTGCCTGTCTGTAGTCAACCATCAACCAGCGCTGCACC
AAAAGAAGCGCGCTTGCCTTGGTATGTTTTTCTGCTCGTGCTGATGCGTG
GTGTAATAGTATACCGACATATGCCGCTGAGCTGTTGCGTTGATGAGGCG
GCAGATGTTTGGGCGGCGTGCAGTTTCTAAAGACTACATACTCGTTGGGT
AAACTGCATGGCTCCTGCAATGTGGATGCAACCCTACGACACTTGCACAC
GTGCTCCAGCTCATCTATCGCATCACGCCTCCGTCAATTTTCTGGGCTTC
TCCTCAGGCCGGCTCGGGTTGCTGTGCCGTACGGCCGATTTTTTTTGCAA
CACCGTGGTGATACGAACATGGCATCTGACCAATGTATGGCATATGAGCG
ACTCCACTCGTCAATGGCTAACCCGCTGCCCCCCCGCCCGTACCCCGTTT
GCCCCTCCCTTGCGCAACAACGAAACAGAGCAAAGTTGAAAGTGGCCAGG
GAAGAGGACGCAGCAGGAGACACGCCGGCGTCAAAATGAGCGTTCGATTC
AAGTATATTTTCATTTTCATATGCATACAGCAAGCGGTACAAAACTTGTC
GGTCTCGTTTGTCTTTTGTGTTGTTTTTCTTGGGAATGGACAGCCCGGTC
GGTGGAAGCCGGCAGCGTTAAGAGTACACGGCCTGTGTACCGGGTGTGAT
GTAAATTAGCGATACTGAGCACCAGCGGCGCGTTGATGTTGTCGTGCCCG
ACGGAGAGAGAGAGCCTCCTTGTAGGCAAAGGCAGCCGTGAAACCGGAGT
GATCTTAGGCCGCCGTTATTGTTATTTGCTGTTGCTGCCAGCATGCTATG
GGTCAGCCGTGTCTTGTCTGTCTCTCATCCCCCCCTCGGCTGACT
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig98:175232..180126+

>mRNA_Ecto-sp6_S_contig98.18754.1 ID=mRNA_Ecto-sp6_S_contig98.18754.1|Name=mRNA_Ecto-sp6_S_contig98.18754.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=432bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:175232..180126+ (Ectocarpus species6 EcLAC_371)
ATGGACGGCCAAAGGGACAAAGACAGGAGACCGATGCGGCTCCCGCCAGA
AGTGAACAGAGCCGTCTATGTCAGAAATCTCCCTTTCAAGATTTCCGCGG
ACGAAATGTACGACATATTTGGCAAGTACGGCGCCATCCGCCAGATCCGA
CTGGGAGACAGGCAGGACACCAGGGGGACGGCCTTCGTGGTGTACGATGA
CATCTACGACGCAAAGGCGGCGGTGGACCACCTGAGCGGCTTCAACGTGT
GCGGGCGGTACCTCATCGTCCTCTACTACCAGGCAAGACGATTTGCACTT
TTTTTTTTACCCGCAAAGATGGCGAAGCGAATGGACCAGCAGGCGAAGAA
GAAGGAGCTCGAGGAGCTCAGAGCAAAGTTGAAAGTGGCCAGGGAAGAGG
ACGCAGCAGGAGACACGCCGGCGTCAAAATGA
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