mRNA_Ecto-sp6_S_contig110.1471.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp6_S_contig110.1471.1
Unique Name	mRNA_Ecto-sp6_S_contig110.1471.1
Type	mRNA
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)

Homology

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BLAST of mRNA_Ecto-sp6_S_contig110.1471.1 vs. uniprot
Match: D7G4J8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J8_ECTSI)

HSP 1 Score: 537 bits (1384), Expect = 7.850e-185
Identity = 306/369 (82.93%), Postives = 309/369 (83.74%), Query Frame = 2

Query:  332 MSTACLSATESGYFSFDQQIHTSHVPDELDAEGGINIDYQITYGWRSSCTWVRAEYTESNGEEKAEEDSGCFGLAEEELLDETEVVLAGGRSMDADTGLAVALGHAVAAAVASIHILFFVLLYFNIDPAPVRGYLYMRGLGLMSALTSFYLLFTCVVSFFFAIKGSLDVNMSTSAGLRPSWAYVLTVIDVTTMVVVGMLACQDEEVDAAIATPQYTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASVSSAPKAXXXXXXXXXXXXGVVFGGAHPTATAAAMSGLGAGGSMLPGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASPAGSESENGSVLSSWTGG 1438
            MSTACLSATESGYFSFDQQIHTSHVPDELDAEGGI+IDYQITYGWRSSCTWVRAEYTESNGEEKA+EDSGCFGLAE+EL DETE VLAGGRSMDADTGLAVALGHAVAAAVASIHILFFVLLYFNIDPAPVRGYLYMRGLGLMSALTSFYLLFTCVVSFFFAIKGSLDVNMSTSAGLRPSWAYVLTVIDVT MVVVGMLACQDEEVDAAIATPQYTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDAS SSAPKA            GVVFGGAHP ATAAAMSGLG                                          XXXXXXXXXX SASPAGSESENGSVLSSWTGG
Sbjct:    1 MSTACLSATESGYFSFDQQIHTSHVPDELDAEGGIDIDYQITYGWRSSCTWVRAEYTESNGEEKAKEDSGCFGLAEKELEDETEAVLAGGRSMDADTGLAVALGHAVAAAVASIHILFFVLLYFNIDPAPVRGYLYMRGLGLMSALTSFYLLFTCVVSFFFAIKGSLDVNMSTSAGLRPSWAYVLTVIDVTIMVVVGMLACQDEEVDAAIATPQYTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASASSAPKATVGSGNIMTGGSGVVFGGAHPPATAAAMSGLG------------------------------------------XXXXXXXXXXESASPAGSESENGSVLSSWTGG 327

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BLAST of mRNA_Ecto-sp6_S_contig110.1471.1 vs. uniprot
Match: A0A6H5JHQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ9_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 9.960e-47
Identity = 101/133 (75.94%), Postives = 101/133 (75.94%), Query Frame = 2

Query:  890 VIDVTTMVVVGMLACQDEEVDAAIATPQ----------------YTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASVSSAPKAXXXXXXXXXXXXGVVFGGAHPTATAAAMSGLGAGGSMLPG 1240
            VIDVT MVVVGMLACQDEEVDAAIATPQ                YTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDAS SSAPKA            GVVFGGAHPTATAAAMSGLG GG MLPG
Sbjct:   12 VIDVTIMVVVGMLACQDEEVDAAIATPQIDTPRAVRLNSYLVFQYTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASASSAPKATVGSGNIMTGGSGVVFGGAHPTATAAAMSGLGPGGGMLPG 144

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig110.1471.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig110.1471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G4J8_ECTSI	7.850e-185	82.93	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JHQ9_9PHAE	9.960e-47	75.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig110	contig	Ecto-sp6_S_contig110:165002..175107 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	1
Model size	1440
Hectar predicted targeting category	signal anchor
Exons	7
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-07_000360.1
Cds size	1218

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig110.1471.1	prot_Ecto-sp6_S_contig110.1471.1	Ectocarpus species6 EcLAC_371	polypeptide	Ecto-sp6_S_contig110 165222..175107 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682348801.7867699-UTR-Ecto-sp6_S_contig110:165001..165221	1682348801.7867699-UTR-Ecto-sp6_S_contig110:165001..165221	Ectocarpus species6 EcLAC_371	UTR	Ecto-sp6_S_contig110 165002..165221 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682348801.7965577-CDS-Ecto-sp6_S_contig110:165221..165271	1682348801.7965577-CDS-Ecto-sp6_S_contig110:165221..165271	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig110 165222..165271 +
1682348801.8058975-CDS-Ecto-sp6_S_contig110:171269..171450	1682348801.8058975-CDS-Ecto-sp6_S_contig110:171269..171450	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig110 171270..171450 +
1682348801.8153794-CDS-Ecto-sp6_S_contig110:171888..171960	1682348801.8153794-CDS-Ecto-sp6_S_contig110:171888..171960	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig110 171889..171960 +
1682348801.8256922-CDS-Ecto-sp6_S_contig110:172904..173089	1682348801.8256922-CDS-Ecto-sp6_S_contig110:172904..173089	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig110 172905..173089 +
1682348801.8354516-CDS-Ecto-sp6_S_contig110:173243..173424	1682348801.8354516-CDS-Ecto-sp6_S_contig110:173243..173424	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig110 173244..173424 +
1682348801.8453412-CDS-Ecto-sp6_S_contig110:174058..174142	1682348801.8453412-CDS-Ecto-sp6_S_contig110:174058..174142	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig110 174059..174142 +
1682348801.8557465-CDS-Ecto-sp6_S_contig110:174642..175107	1682348801.8557465-CDS-Ecto-sp6_S_contig110:174642..175107	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig110 174643..175107 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp6_S_contig110:165002..175107+
coding sequence from alignment at Ecto-sp6_S_contig110:165002..175107+

protein sequence of mRNA_Ecto-sp6_S_contig110.1471.1

>prot_Ecto-sp6_S_contig110.1471.1 ID=prot_Ecto-sp6_S_contig110.1471.1|Name=mRNA_Ecto-sp6_S_contig110.1471.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=406bp
MIFRRPIRDVVEERHGSRTCGVHVFLFYILALGAVLAMSTACLSATESGY
FSFDQQIHTSHVPDELDAEGGINIDYQITYGWRSSCTWVRAEYTESNGEE
KAEEDSGCFGLAEEELLDETEVVLAGGRSMDADTGLAVALGHAVAAAVAS
IHILFFVLLYFNIDPAPVRGYLYMRGLGLMSALTSFYLLFTCVVSFFFAI
KGSLDVNMSTSAGLRPSWAYVLTVIDVTTMVVVGMLACQDEEVDAAIATP
QYTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASVSSAPKA
TVGSGNMMTGGSGVVFGGAHPTATAAAMSGLGAGGSMLPGGSGGGGGTLR
MSAAAASASAHALGRFAAAAVAAGGGGGGASAGAESASPAGSESENGSVL
SSWTGG

mRNA from alignment at Ecto-sp6_S_contig110:165002..175107+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp6_S_contig110.1471.1 ID=mRNA_Ecto-sp6_S_contig110.1471.1|Name=mRNA_Ecto-sp6_S_contig110.1471.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=10106bp|location=Sequence derived from alignment at Ecto-sp6_S_contig110:165002..175107+ (Ectocarpus species6 EcLAC_371)
TGTAGCAAGACCGATCCGGAGCTAGAGGGGCGAGAGAGAAGACCGCCCCA
CAAGCCTGACACGCCGTGGTTGGGTTCGCTGCAGCAGCATTTCGGGGCCT
TGTGGAATCTCCAATAGCGCGCAAAGGGGAGAGAGCCAGGGCAGACCGTA
GTCGCGTGCTTGTTGTTGGCGCCAAAGCAGCTGCGCGGAGAAGTGTTTCA
GCGTCGGAGCACACGAGCAGATGATATTCCGAAGACCGATAAGAGACGTG
GTGGAAGAGAGGCACGGGAGGTGAGACAGACAGACCAACACGAGAGAGAC
AGAGAGAGAGAGAGGGAGGAGCGTGACTCGTGCTTTGTGGTGCCCGAAGG
CATGCGGTCAATTACTGGTCATATCATACGGCCGCCGCCTGGCGCCGAAG
ACTCGGATTATTTTTTTGGTCTCATCTCCGCTACAACTGCTATTGTTCGC
GCTCTTTTTGACCTTATTTTATAGGCGAATATTTGTGTCCTCATGTTTGT
CTGCTTCGATGCATATACGCCTGTGAGAGAAACAACAACAAAAACACCAC
GTTGAAGACACCACTTGCCAGCCACACCCAAGGACAACACCTAGCACACG
CCCCCGGTCAATCGGGCCGTGTTCCTGACCATGATGGGATGTGAATGGCA
CAACAATTGTAGCCAATTTTGGTTGGCGACTTCAACTCTCGTCTGGTCCA
AAATATTAATATTATAGCACAGGTTTGATTGCCATCTGCCGTGATCAGCG
CTTGCCCCTGCATCCGAGAGACGGATCAACCTCTTGTATGCGTTGATTTT
TTTTTTTTTATTGTCTCTCCGCAAGCAAGCCAGCAAGCCACCCATGGCTG
CGCCGTTGCCGTTGTTAGGAGCACGTGTTGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGATAGCACGAGAGAGATGTCTGTCC
CACAATCCTTTGTGCGCGCGTTGACATTTTGGAGGCTCCTGTTCGAAGTC
CGTGTGTGATGTCTGTTTCTTGAGTATTCGGTCGAAGACTGCATGCGTGT
GGGACTGCACCTTGATGATGCCATGTCCCGAGGCATTCGGCCTCCCTCCA
GAGAGGGACCGAAGACAACATACCACAGGCCTCAAGTGGCACCGCGCCAT
GTAGTGTTGTGATGGCGACAGCACCATGTAGTGCCGCCGCTGCTGGTGTA
CGGGCTAGACCTCTTCCCCCGCCCTAATACAATAGCCAAACAACGAGTCT
GATTATCGTGGTGGGCGTAAAACAAGGCGTTCCCGAATGCATGCGTCCGG
CAGCACTTTAGCGGCATGTTGTCCCATCGTCGTTCCCACATATGGCATTA
AAGTAGTACCGGGTGGAGGTGCCATCATTGAGCTTGAGACAACACGGTGG
GGGTGGGGGGGAGCATGGCAGCAGTGCTAAGCGTGGCGAGGGAAGAGTAA
GAAGAGTGTGGCGATACGTGTGATACATAGCCGAAGCCCTCATCCTTTGG
GGAGATCCTGTAAAGAGAAAACTGAGAATGTAGCTTATGAGGCGGCCGAA
ACCCTTTACCTGTACATGCCATATATCATAGCACCACACACGCCGGAGAG
ATGGCGCGCGTCAACCAAACGCCACTCGTTTTTTGTTGTGCCGTTCTGCC
TTGTCTGTCTTGTCTACTATAGCGTTTTTCTTCCATAAACAAGAACATAG
TCATATCTATTTATCCTTGCGAGTCCAGGATAGATGTGCGATGAACCCCG
TCGGTCTCATTCTCAGCCTGTCCCTCCACTGCTTGCTACTTCTATGTCGT
ACCATCCACTGCGGGCGATTCTTCTCCTGTAAGCACAAGCATGGTCCCGA
GCGTTGGTAGCGGGAGATGAACACATGTTTTCGTAGTAACAATGTTGCTG
GGTGGATGCCCGAAATCATGCGCCGTTGTCTGTATGCCATGTATGCCCAC
AACAGGGTGGTTTTGGCACCAAACGAAAAGTGCGGATCTTAATGATACCT
TATGCAACGGGCCCATGTGGCCCCCAAACGAAAAAACTCTCATGATGCTA
GTCTTAACGATATACCAGTAGCTCTTAGGCTGGGTTGGAGACGACAAGAC
GCTGAACGAACCAACCGAAAGGAAGAGGTGGCGGCGACACTCGTCCTGTC
CTACTGACGGGTGTTCCGGGCCAGATTTCAACCCCTCAATCCCGACAGCA
ATGAACCCCGGCGTCGTCGTTCAAGACGCCGACTGTTTCTGGCGGCGGCG
CGCACCCAAGTAACTCAATCCAGACAGACATGCACTCGGTGCGGAGACAA
GGTATCACACACACTCAGCGCGGAGCCTCCTGCGGAACCGCAGCATTGAT
GGCACTATTGTACTATCCTTTGGCGGTGGTTCTGCCGTATCTCGGAAGAG
GAAACAAGGATGGTGTTGGGGGGATCGCCCCCACGCCCCGGGGCTGAGGC
TGCTATCGGGAGGGAGGGAGGGAGGGCTCGCGTTGACATCATATGAAGCC
GTTACGGTCCCGGGGGGGGCGAACGACCGTTACAGGCGGAGAGATGGCAC
CCGCGCTAGACCGACTTTCAAAAGCTCGaaTTGCTCGAATAGCTCCACAA
CCAgGGGGTTGCAGAAAGAGCCCGAAAATTctaCGGGAAGCTCCGACAAG
ATGTTTGCAAGCTCCACCACCGCCTGTGATGAGGGGGTATTCAGCTTGAC
CTCCTTGTGGAACACCGCAACCGAAAATCGGTCTTAGTATCGTCTCGGCC
TCCCTGGACCCTTCTAACGCATCATCTCCAGCAACAAATGTTCTGGGCGA
CACGACAGATCATCACCGTTTGTGATGTTGGTATTTAGCTTGGTTGTGGC
GATCGAGCCCTTGAAAATCGGTCTTAGTTGAGGGGGGGGGGTGCCATCCT
TCCGCGTCTTACGGTAAATTATGCTGTAGGTTTCACAAGGTTGTCACACC
GCCCAAATAGAAGGATTTTCAAGGTTCGATTACTCCACCGCAGAAATAGT
GGCGGTGCAAGAAATTGCGGCGTTGGAGCCCTCTGATAGAGAGCACTCCG
AAAATGCGTCTTTTGACGTGTGAATCCTCTTCGTTGCTGAGAAACAGAGC
TTTGAAAATCAGTCCAGCAGGGGGGGTGTGACATACCTTGTGTCACCTAT
GTTCGACCAAAGCAGGGTTGTTGCAACCTGATTCTACACGATCAACCATG
CCGTCTACCAGTAATGCAAGGTTGGCAGGTGAATATAGCCGTGGTTGCTT
TGCGTGAGCGCTAGTTCAGCAGTTTGAGGAGAGTCTTAAATGACAGGAAA
CCTGGTTGCGAGATCGTTGATGGTAGACGCTCATTCGTTGTGGCCTTGAC
GGTTCTTCACGATGGTGTTGGCCATGAGCCGCGGTTGGGGGAAAAACTGA
CGATGGGATGGGCGCGGTTCACGCATAGTCTGCTGATACCCTCTACACAC
ATCACCTCCGAACCAGACAGAAAGTCTAGATACAGTATGTACCCTTCCGA
AGGGTTGGGAGTGGGAGGATATGTCTGTCGCCTCTGGTCACACACCTGCA
AGTCTTGCATGGTCAACGCTAGCTCCCCAAGGACATTATACCAGATTTGC
TAGCTTGTGTTTGCGCTGGCATGGTGCGGGAGGTTAGCCGATTCCTGGTG
TGCGTTTTACCCGTACACACCATCGCAGGGCCACTTAAATATGAATACAC
ACATCCACAATATACTCTGCGTATTGTCCTCGTGCTCGCTCTAGAACGCC
GGTCAATGTTCATCTTCGGTTTTTCCGACGACCCCCCCACCCTCCGCACT
ACCCGACCCCAACGCACGCACGCACCCTAGAGGTCTCAAAGAGGTGGAAA
GTGGTGTAGAAACTCTTCCTTTTACAATATAAATGTTTGAGTTTGCTCGT
GCAGGCAACCGCGTTTTTGATTCCCATCTTCTGCAGTAGAGTGGCATGAC
ACAGCAAATCAGCGGCGCGGCAATGTTATTCCTTTACAAGCGAAAACTCG
ACAGATGAGCGGCATGGGCACAGATTCTAGCGGCAGGGTTGGTGCGTCAC
TACGGCAGCAGTTTTTACGAGAGGCCACGCCTTGTTCGCTGTTCGGAGTT
TTAAGTATTTGTCTCCCCGACAATGTTTGCGTTCGACCAGGGGGCGAAAA
TACAAACCCGAATCTGTACCTTACCATACCATACCATATCATGTACGGGC
GGTATCCCGGCGCAGGAAGTGGCCACACGGTTGTGTTGCGCAGGGAAAGG
AACGGCAGAAGGTTACATACTTCCACCCCGAAATTCGATGACGTTATGTA
CAGCCGATGGGCGACGCCGTGTCCAATAATATTCCGAGGCGACGACGTCG
AGCTAAACAGACGGAACTCCAGCCATGCCAGTTTTTTTTTTTTTTCTTCA
CTTCAAATCAGCGCTCACAGCACTAGTGTCGTTTACTCCAACCCGTGGTC
ACACAGAAGAGCCCTCTCTACGGTCCCCTCCTGCGGTACTTTGTCTTCGA
TTTTTAATGCGAGAAGAGTTCAGCACTCTCTTCCCTATGTGTAGACACGA
ACTAGCGCCTATCTACTAGGCCAGGAGCGGAAGCGAGAGAAAAACTCACT
TAGCAAGAAAAATTCGCTTACGCCGGAATTCGAACCCCTGGCCTGACATT
TAGAAGGTTTCAAGGTTACCAACTAGACCACCGGGGCGACCGGCAGCATT
GCCCACACTCAAAACCGAGCAATACAGGTTCGGGCACACAATTTTACAGC
GCCCAAACTCTACATTGCAACTGGGAGTACGTTTGGACCCATGCTTCTAG
CAACCAAATGAAGACTGGAAGCTGGGGATGAGACTTACAGGGGTTATCTC
TCGGAAACACACTTTTCTCGGTCTCGGCATAACATCGTGTACAGCTGGTT
TTCCCCTCAGGAATCGATGACAAAAAGCGGTTGGTGCACTGCACTGCTGT
CATCTACCTCGTCGTTTGTAACCGTTCTGCTCATCATTTGGTTGGTCAAT
TTTTGGGACAGGTTGGTGTCGTACGTACAGTCGTTGCAGGTGTTTGGCCG
GTGTCTTAAAAAAAATCAACTGCAATTACTTGTCAGGATCGGCCATGTTC
CGAGACCTGTTCAAATCCGTTGCGTTTTTTGCAATCGACAAACGACTCCA
CCCCCCTGTACAAGTATAATACAGAGAAACCACAGAAGCTTCCATTTTTC
TCGACTAACAAGATCAGCAGCCATGTCGATATGGAAGACCAGGTAGAGTA
GGTCCGCTGCCATGATCTGCCTCTGCTCGTGCTAGCAGGGAATCAGCTCA
CAGATGGACTGACCGAACGGCAGGAGCGTCCCAGAAAAGTATACTGTCAG
TCCTCAGCCCTCATTGGTCAACGGAGCAACTGCTCTTCCGCCTGCTGCAT
CACACGCATTGCCTGGCCACATTCGGAAATACTATTAATCTATAAATAGG
CCGTTTCTTGTCGGCTAGAGAGAAACTGAAAAACAAGACGAAAAGACGTA
CAATTGTAAGTACGAATGTACGAAGTCATGATGATTTACAATATGCTTGT
TTCCTCCGTTTTTTGTCGGCTAAAAAGACACCGAGACACAAAAACAACGT
AGAGCATTGGTAATTTATCCTGAACGCCTGTGCTGTGGATCGGGATGGAT
TCACTGCTGTGTTGCTGTATGAAAATGCAAGAACGACAGTTCTCTTTCTA
CATGCGAGAGCGCCTGGAGACAATAGTGCGTTTGTCGTGCCTTCGTATTA
CGGGTTTCGGAACAGCTTCAGCTATTCCCGCTCCGACCACCGTACTGTTT
GTAGCGTACTGTACCTCACCTTGCCCTACTACCCTACCCTTTTCCTGGGG
ATTCTTTTTTCAGTGGCCTTGGCAGGCTTTTTCGCTGAAGTGAACATGTT
GGATGCAAATTGGGTTCGGGTTACGGTATTTTCGTTTTTTTTTGTTGTGC
ACGGACCTTGTGAACCGTGTCTGACACTATTCGTGCGTGGCTCACGGTGA
TACCTATGCCTGCACCTTGTTGATGCGTATCTGTACTACCTCGCGGAAGT
GGGAACGCTTCAGTACCTATGTTTTTCTCACCAAGTTTAGCAACCCTCCT
TCCCCCTACACAAACGCTTACGCTTCCTCTCTCTTCGTGCTCTGGTGTGA
TGATACCATGATACCGTGTACTCCAACCGATCACCTATTGCGGGAGCCCC
GTGTTTGTGTCTAACCCCCCCGCCACGGCCACGCGCCCTCCCCCTTGTCT
CTCTTTTTGATCGGCGAGCAGAACATGCGGAGTGCACGTGTTTCTGTTTT
ACATCCTGGCACTGGGAGCGGTGCTGGCGATGTCGACAGCCTGTCTTTCG
GCGACGGAATCGGGGTACTTCTCCTTCGACCAGCAGATCCACACGAGTCA
TGTGCCGGATGAATTGGACGCAGAAGGCGGCATCAATATCGACTACCAGG
TGAATTAATGGGCTGTAACCATACCCCCTGGACCGATATCCAAAGCTCGA
TTTCTCAACAGCAGGAAGAGTCCGGCGCTGAAAACGGCGGCGCTGGAATT
GTCTCGTCGAGAGATTTTTGAAAGTGTACCGTTTGGTTCATGCATCCTCT
TCGTCGTGGAGTCATCGAGCTTTGACAATCGGTTCAGGGGGTGTGTTATC
TCGTGTCATATACGGTATCTTGTTCTGTTATCGTGTGGTCGGGGATTTTT
TTTTTCTTCGAACAGTTGTGTGTGTTTCAATTTATAGACACGGAAAGTGT
TGACGAGTTGAAGATGACATTCATAATGTACTACTTCGTAAATAGCACTC
GTGTCTCAAATCTAGTATGTGGTTTTTGTTTCTATGGATGTTTCCTGACC
AATGTAACCGGGCATTTTTTCTGCCTACTCGCTTCAGATCACGTACGGTT
GGAGATCGTCGTGCACGTGGGTGAGAGCGGAGTACACCGAAAGCAATGGC
GAAGAAAAGGTATGCATGCATACGTGCAGTACTGTTTTTTGTCCACGACC
CGTACATTCATTGCGTGTTAAATTGCGGCGAGAACCAGGGGACTCGGTGA
AGGGAAGAGGGTTTTAGAATGCTTCGCACGATTCGGTAGTATTAAGATTC
TACTGCTGTTGCATTCTGTGGGCTGGACGATTTGTTTCGTCGATGTTTGT
CCCACTTGTCATGAAAACCTGCGACTACGCCAGGCTGGGGTATTTGTATG
AATAGGACAGAGGGATCACTCGCACGTTCACGACCCCTGCCGTCAATTTG
CATACAATGTAGTGGTTGAGAGGCGTAGCTCTTTGCGTCGTCTGCTTTCG
AGTTGGATTTTGTGTACTCGCCAAAACCCGTTTTTTCGAGACAAGAGTCA
GGAGTCTGACAGGCCTTTATGTAGACCTTGAATTGGTACCATAGTACTAG
GAAACAGTAGGCTTTCAGGCCTTGAAAGCGTACACTAGGATATGCCTTTC
GACCTGGGAATCGGTTATTTTCTTGTTTTCTGGAAGTCAGCAATAATTAT
TTGGCGTGGGTTGGATGCCACGTTGTAACAATAAGCAGAAAACACATATA
TAGGAGACCGAATGCTTCACTCGCAGGTGGATGGAGATGTTCCTTCTATC
ACGCCCACTGGCTGCAGCGTTGCGCTTGATACTACTGCTGTATAGGTTTT
AGTATGGGGCTATATTGTACTGGTTTCAGTGTAGGCGCGCCCGTTGTACT
TGGTTTTGCACTGGTCTTGGGTTGGAGGCCCCGTGTCTAGACGTCGAGAG
TCCGGGGGGTACGGTCCGATTTTCTTCCTCTACAGTAGAAGGCGGTGCTT
TGGTTCTCACGCGAAACATGACGCGGAATTCATCGGCAACAACACCTCGT
GCTTATGACCGCCTGTCTGCTCTCGGACACCACCGCCGCCACCACTGCCG
TAGGCGGAAGAAGATAGCGGCTGCTTTGGGCTGGCGGAGGAGGAGTTGCT
AGATGAGACGGAGGTGGTCCTAGCGGGAGGGAGGTCCATGGATGCCGACA
CCGGGCTGGCGGTTGCACTGGGCCACGCCGTGGCTGCAGCCGTAGCTTCG
ATCCACATCCTCTTCTTCGTGCTGCTGTATTTCAACATGTGAGTATGGGT
GTTTGTCGCCATGTCCCTCATTTGCGTAGCCCCCCCCTGGTCTAACGACT
ACGGCATGCACGACTATGAGTACATGGACCCCCTCAAGCTTTAGCCCATT
CCTAATCGACGACCCCCCCCCCCCTCTTACGAAAAAAAACAGCGACCCAG
CGCCTGTGAGAGGCTACCTGTACATGCGAGGGCTGGGGCTGATGTCGGCC
CTGACGAGCTTCTACCTCCTCTTCACCTGCGTGGTGTCGTTCTTCTTTGC
CATCAAGGGCAGCTTGGACGTTAACATGTCTACCTCCGCTGGTCTGCGTC
CCTCTTGGGCCTACGTACTCACGGTGAGTGAGAGGCCAAAGGGGGGTAAA
ACGTGGTAGGCCGATGCAAGTATCTCGGTTTGTTTGGATTTTATTTTTTT
GGTGCTGTGTTCGGCCGATACAAGTTTTACCCTCATTCGGTCTGGTTGAC
GTTTTTTTTTTCACTTGGCGAGGGCGGGTTGTAGGCGTACGCCTTCGAAA
CTCCCTCCCACTGTGCTTTGGGTTTTTTGTTATTGATACCGGAACAGATA
TTGATGTCATCTGCTCGGGGGGGTATTGGAACGTCAGCAGCAAGCACACG
CCGCGCCATTTTTTGTTTTTTCATATGACCTAATGAGTCCATCTCTTTTT
TTAAAAAGCGTCTGAGATAGTTTTTTTTGTCACAATTGAGACAAACATCT
CGTTGCCGCTGTCGAACTCGAAAATTTATTTCGTGGCCGTCTGTCTGTAC
CGGCTGTCGCCACCGTCACTTGTAGGGTCTACCTGCCTTGCATTGCCTTG
TTTCCATTGACACGTCAAGGGAACTGGGGGGCACCGCAGAATGATTATTG
TTGGTGGCACGTGTTGCATTTTCTCAGCAATGCGTGTAAAAACAAGGCGT
TTTGTGTTCCTTCCGTTTGTTGCATGCTTTTTTCCCCTTTTTTTTTTTGG
ATCTCAGGTTATCGATGTTACGACCATGGTGGTCGTGGGGATGCTGGCTT
GCCAGGACGAAGAGGTTGATGCAGCCATTGCCACACCACAGGTATGGGCA
GGAGCTACCACTGTAGAACCTCCTGAGTTGCCTGAGACTGATTTTCTCTG
CGAGGTATGCAAACGTCAACCATGCACCGGTTCTTACGGCCAAGCGTTGT
GGTGCATCTCTTTGTGCCTGAAATTATTAGCTCCCAGTGGTGACGTGTGT
TGTACACAACAGAAGCATTTTTAGCGCCCTCGTCATCCCATCTATTGCTG
TCCTCGCCTCTGAAAGTAGTCTGTCCTTTCTCTCTCTGCTTCAGTCCCTC
CGGCCATTGCTATGCAGGGCCATTACTATCCAGGGCCACGCAGAATAGTT
ATTATCCCTGAGCCCCCCCCCCCCCACATTTCTTGTGCTGTGTTGCGGCA
GACCAGTAGTTGACGAGACGTTGCCTGGTGCCCGTGTCATCTCGATTCAT
GTCAACAACAAAGCCGAATTTTGTCAACCACAAAGCTTGATAGATAGATC
CCCCCCGTGCCGTGCGGCTCAACTCGTACCTGTTGGTTCAGTACACGTCC
TCTTCGAGAGACGAGGACACCGTGAAGCGCGCCAACGGGAAGCTGTTGCA
CCTGCGGTCCAAATCCGGCGACACCTTCTGTGAAGCGTCCACATCCTTGA
ACGGACCGGACGCCTCGGTCTCCTCCGCTCCGAAAGCCACCGTGGGTAGC
GGCAACATGATGACCGGCGGCAGCGGAGTAGTTTTCGGGGGAGCGCATCC
CACCGCAACCGCCGCTGCCATGAGCGGGCTAGGAGCAGGCGGCAGCATGC
TGCCGGGCGGGAGCGGCGGCGGGGGGGGCACGCTGAGAATGTCGGCGGCG
GCGGCATCCGCGTCCGCCCACGCGCTCGGGCGTTTTGCCGCGGCCGCCGT
CGCCGCCGGGGGGGGGGGGGGGGGGGCTTCCGCTGGCGCGGAATCGGCGT
CGCCGGCCGGGAGCGAAAGCGAGAACGGCAGCGTTCTCAGCAGCTGGACC
GGTGGG

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig110:165002..175107+

>mRNA_Ecto-sp6_S_contig110.1471.1 ID=mRNA_Ecto-sp6_S_contig110.1471.1|Name=mRNA_Ecto-sp6_S_contig110.1471.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1218bp|location=Sequence derived from alignment at Ecto-sp6_S_contig110:165002..175107+ (Ectocarpus species6 EcLAC_371)
ATGATATTCCGAAGACCGATAAGAGACGTGGTGGAAGAGAGGCACGGGAG
CAGAACATGCGGAGTGCACGTGTTTCTGTTTTACATCCTGGCACTGGGAG
CGGTGCTGGCGATGTCGACAGCCTGTCTTTCGGCGACGGAATCGGGGTAC
TTCTCCTTCGACCAGCAGATCCACACGAGTCATGTGCCGGATGAATTGGA
CGCAGAAGGCGGCATCAATATCGACTACCAGATCACGTACGGTTGGAGAT
CGTCGTGCACGTGGGTGAGAGCGGAGTACACCGAAAGCAATGGCGAAGAA
AAGGCGGAAGAAGATAGCGGCTGCTTTGGGCTGGCGGAGGAGGAGTTGCT
AGATGAGACGGAGGTGGTCCTAGCGGGAGGGAGGTCCATGGATGCCGACA
CCGGGCTGGCGGTTGCACTGGGCCACGCCGTGGCTGCAGCCGTAGCTTCG
ATCCACATCCTCTTCTTCGTGCTGCTGTATTTCAACATCGACCCAGCGCC
TGTGAGAGGCTACCTGTACATGCGAGGGCTGGGGCTGATGTCGGCCCTGA
CGAGCTTCTACCTCCTCTTCACCTGCGTGGTGTCGTTCTTCTTTGCCATC
AAGGGCAGCTTGGACGTTAACATGTCTACCTCCGCTGGTCTGCGTCCCTC
TTGGGCCTACGTACTCACGGTTATCGATGTTACGACCATGGTGGTCGTGG
GGATGCTGGCTTGCCAGGACGAAGAGGTTGATGCAGCCATTGCCACACCA
CAGTACACGTCCTCTTCGAGAGACGAGGACACCGTGAAGCGCGCCAACGG
GAAGCTGTTGCACCTGCGGTCCAAATCCGGCGACACCTTCTGTGAAGCGT
CCACATCCTTGAACGGACCGGACGCCTCGGTCTCCTCCGCTCCGAAAGCC
ACCGTGGGTAGCGGCAACATGATGACCGGCGGCAGCGGAGTAGTTTTCGG
GGGAGCGCATCCCACCGCAACCGCCGCTGCCATGAGCGGGCTAGGAGCAG
GCGGCAGCATGCTGCCGGGCGGGAGCGGCGGCGGGGGGGGCACGCTGAGA
ATGTCGGCGGCGGCGGCATCCGCGTCCGCCCACGCGCTCGGGCGTTTTGC
CGCGGCCGCCGTCGCCGCCGGGGGGGGGGGGGGGGGGGCTTCCGCTGGCG
CGGAATCGGCGTCGCCGGCCGGGAGCGAAAGCGAGAACGGCAGCGTTCTC
AGCAGCTGGACCGGTGGG