Homology
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match:
A0A6H5JS20_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS20_9PHAE)
HSP 1 Score: 1011 bits (2613), Expect = 0.000e+0
Identity = 566/723 (78.28%), Postives = 573/723 (79.25%), Query Frame = 1
Query: 1 MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEA---MPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSTGPNGDGGAPPVITAVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRPLQSTGPQDGGPPLAGSFLRPSGSGGASAAGPAGAAGGVDGGQWSLRGMLPAWSREQPSKPGDGS---------------------------------------------------------------------------------------------------TLRQAPGSSFGGGGSSRGGSAWTPDMSRGSGASASSSPPGNLLGAGGAVPTPSPPREELAGSGGTSNGNSGRGPTDRPAGGGLFSAAGFGGENAVFPVSSGGSSMAASPAWPSEQSNARQGRAAGAEGRARAGESSGGRNLAVPTFSSSLDTGARLTSEVGRSGGTFVGTTTLGESGDHHGFEEEDGEEEENPFA 1863
MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEA +PGSAGTTNLFNLVAGRVDIPFSMKKKSPTA+DNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNT+YEYEVSVPATVDTGSRV GVTWYEVHTMRKADSKGTLVHRRFRDF+ALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGD+SFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGS GPNGDGGAPPVIT+VLGNGRSPPGVC GDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGR L STGPQDGGP LAGSFLRPSGSGGASA GGQW LRGMLPAWSREQPSKPGDGS TLRQAPGSSFG AW PD SRGSG S SSSPPGN+LGA GAVPTP REELAGSG TSNGNS RGPTDRPA GGLFSAAG GGENA FP SSGGSSMAASPAWPSEQSNA G AAGAEGR R GESSGGRNLAVPTFSSSLDTGAR TSEVGRSGGTFVGTTTLGES DHHGFEEEDGEEEENPFA
Sbjct: 1 MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAKEEVPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAEDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTEYEYEVSVPATVDTGSRVRGVTWYEVHTMRKADSKGTLVHRRFRDFHALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVLGNGRSPPGVCSGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRQLPSTGPQDGGPSLAGSFLRPSGSGGASAXXXXXXXXXXXGGQWRLRGMLPAWSREQPSKPGDGSALAPGGSAAPGREWNPHENPRTRIGNGVGRGGAVGPFGNGTGAAAAGRTNPANSSLFGGDATAGASGGGMGGAAKKESLFDSWRSPRAAXXXXXXXXXGTLRQAPGSSFGXXXXXXXXXAWMPDTSRGSGTSTSSSPPGNMLGAAGAVPTPPTSREELAGSGSTSNGNSVRGPTDRPARGGLFSAAGSGGENAGFPGSSGGSSMAASPAWPSEQSNAPLGGAAGAEGRVRGGESSGGRNLAVPTFSSSLDTGARFTSEVGRSGGTFVGTTTLGESDDHHGFEEEDGEEEENPFA 723
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match:
D8LMZ7_ECTSI (PX domain containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ7_ECTSI)
HSP 1 Score: 680 bits (1755), Expect = 3.200e-242
Identity = 348/355 (98.03%), Postives = 351/355 (98.87%), Query Frame = 1
Query: 211 MKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSTGPNGDGGAPPVITAVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRPLQSTGPQDGGPPLAGSFLRPSGSGGASAAGPAGAAGGVDGGQWSLRGMLPAWSREQPSKPGDG 1275
MKKKSPTA+DNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGD+SFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGS GPNGDGGAPPVIT+VLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGR L ST PQDGGPPLAGSFLRPSGSGGASAAGPAGAAGGVDGGQWSLRGMLPAWSREQPSKPGDG
Sbjct: 1 MKKKSPTAEDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRQLPSTAPQDGGPPLAGSFLRPSGSGGASAAGPAGAAGGVDGGQWSLRGMLPAWSREQPSKPGDG 355
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match:
A0A835YSM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM5_9STRA)
HSP 1 Score: 233 bits (593), Expect = 1.480e-64
Identity = 137/343 (39.94%), Postives = 196/343 (57.14%), Query Frame = 1
Query: 16 SILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAMPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVPATVDT----GSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAG---STGPNGDGGAPP---VITAVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPI 1014
S+ GE+NR+W +DS G +H+L+L HDC++GARA +LDY + SAGT+N NL+ G I F +K + G+L I R G+ G+ Y CEV+G+ + +TTS V N ++E++V +P++V G VTWY + R D T VHRR+ DF L +Q + +MKGHHL SLP P K L + D +F+E RR L+ YL+TLL++PHV LD+TRAFLG+VG+LRE R+ V+GG G GGAG + GDG + P + A L G +P GV GD L +V G + E SL + + +P ++H + +
Sbjct: 90 SVFSGEINRHWEFLDSAGGRHVLSLIHDCVSGARACLLDYAELKDSAGTSNCLNLLFGAAKIAFEVKATG----EWGKLEIRRSGILGYQYRCEVDGRAIRETTSKVNNQEHEFDVRIPSSVQACAYKGGDQPNVTWYLLRVRRLRDGACTEVHRRYTDFEMLHQQCDGMMKGHHLSDSLPPLPCKSPLL--DRSDAAFIESRRAELQAYLRTLLRVPHVGGLDTTRAFLGLVGDLRE---------------RSFVVSGGAAGGGGAGFALTADVQGDGLSDPHGFLTVAQLLRG-APAGVAVGDMLLRVGGATIEGKSLLQVTERLEKMPQPYLVHLISAV 410
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match:
A0A7S2DHE0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHE0_9STRA)
HSP 1 Score: 212 bits (540), Expect = 7.000e-59
Identity = 131/364 (35.99%), Postives = 195/364 (53.57%), Query Frame = 1
Query: 7 QQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAMPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQN-------TDYEYEVSV-------PATVDTGSRVS-----------------GVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSTGPNGDGGAPPVITAVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFL 1005
Q VS+L GEVNR+W D G H ++L+H +TGARAAMLDYE +PGS GT+++F+ G IPFS+ S + G L+I R G+ GF Y C V G++V + T +V T +++V+ PA +D G VS V WY + +R++D T VHRRFRDF L Q+++ +GHHL+SSLP+ P K+ K +H D +F+EER+ LE +++ L+++PHV + ST FLG +LRE S+ + +++G +L +A+ D P + +V G+ + + PGD + K+NG ST M E S+ RP + HFL
Sbjct: 10 QMVSVLSGEVNRSWLFPDQDGRVHEVSLYHHTVTGARAAMLDYEELPGSLGTSSMFHTTHG---IPFSVSSTSGVITE-GSLNIHRHGVFGFRYSCLVAGRVVPECTLMVDRKTAGNDVTPQQHDVTQHGGLLPSPAIMDAGVVVSIDDXXXXXXXXXXXXELSVAWYSLRVVRRSDQATTTVHRRFRDFVELASQLQASFQGHHLQSSLPQPPRKEFKYLKDHRDPAFLEERKHHLEIFMRRLVEVPHVLHVSSTLTFLGFSNHLREMSLIFTTEKIGVRLSKAT-------------------DSDFPATVESVEGHQQGRHEIRPGDIVSKINGHSTAFMKFEEVVRSIQTIPRPFVCHFL 350
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match:
A0A4D9CLT8_9STRA (PX domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLT8_9STRA)
HSP 1 Score: 184 bits (468), Expect = 5.430e-46
Identity = 124/365 (33.97%), Postives = 184/365 (50.41%), Query Frame = 1
Query: 10 QVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAMPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYE-YEVSVPATVDT-GSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSTGPNGDGGAPPVITAV--LGNGRSPPGVCPGDRLFKVNGDS-TELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRPL 1089
+ ++L GEV+R+W + G KH++ L+HD +TG R+ + E +PGS G++ F+ A ++ + G + I + GL F Y C VNG+ + T + + D E + +++ + S+ VTWYE+ R +D TLVHRR+R+F L EQV + KGHHLRSSLP PG++ KL +H D +FVEERR LE L LL +PHV + + FLG L+E SV + ++LG + R + V + V+T V G G V GD L KV G+ ++ + V+R RP+++HFL + R S FL PPG PL
Sbjct: 3 RTNVLQGEVHRSWVWLSPAGAKHVIDLWHDTVTGVRSVAVGMEEVPGSMGSSPFFSTEAHHINFTVGQDQC------RGMVIIEKAGLFSFRYTCVVNGRPLKATLQGLADEDEERFNIAILGAANAYSSKEKSVTWYELTVTRGSDGARTLVHRRYREFVCLFEQVHAAFKGHHLRSSLPELPGRQLKLLVDHNDTAFVEERRLLLETALGKLLSVPHVGAMVPVQVFLGFFDRLKEHSVIFTQRDLGLSITR-TVVPEESI------------------VVTRVKEAGPGGQKSRVMVGDTLSKVGGEPVSKFGGFDGVAFQVSRGLRPIVIHFLEAVDRNPS------HDFL----PPGEPL 332
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match:
A0A7S3M5K7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5K7_9STRA)
HSP 1 Score: 177 bits (449), Expect = 3.260e-44
Identity = 110/337 (32.64%), Postives = 178/337 (52.82%), Query Frame = 1
Query: 13 VSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAMPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDTTS-VVQNTDYEYEVSVPATVDTGSRVSG--VTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSTGPNGDGGAPPVITAVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPI 1014
VS+ +G++ R W + G +KH+L L+HD ++G R+AMLDY+ + GS G ++L L+ + F + P G + I R G T F Y C +N + + + T V +N D ++ ++ TV T S + WY V T R D + VHRRFR+F L Q++ MKGHH+R LP P K K +T+H D SF+++R LE++L + +PHV + +AFLG++ +RE+S++++ LG L G+ G+ P + ++ GV PGD+L +VNG + + AA + + RP+++HF+ I
Sbjct: 16 VSVFEGQLTRTW-FYEHGEKKHVLNLYHDTISGVRSAMLDYQEIRGSLGNSSL--LMDSKGHRIFFTIENLP-----GYIEIKRSGWTSFVYSCCINDRDIKEATQGVPENQDVVFKPTILDTVFTVDDQSEFQIAWYVVKTTRITDGATSTVHRRFREFAELNSQIKQNMKGHHMRDVLPALPEKPLKQFTDHHDPSFIQDRCIKLERFLIAMTSIPHVGNMVCMKAFLGIMDQVREYSLAFQAPTLGLSLLPRDR----------------QGEPGSSPCVVGMIQKPEVCQGVLPGDQLSRVNGVPLQGATFAAAVARIKSTPRPMIVHFIQVI 328
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match:
A0A7S2UVB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVB3_9STRA)
HSP 1 Score: 83.6 bits (205), Expect = 1.460e-15
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 1
Query: 13 VSILDGEVNRNWHLVD-SGGEK-HLLTLFHDCMTGARAAMLDYEAMPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDT 324
VS+ GE+NR W VD GG+K H++TL+HD +TG R AM+DYE + GS GT+++ +G V+IPF + GR+ I + GL GF YEC V +++T
Sbjct: 2 VSLWSGELNRTWRFVDPEGGDKEHVVTLYHDTITGVRCAMMDYEEIQGSMGTSSVLMSSSG-VNIPFIAG-----GRHIGRIHIAKDGLLGFRYECWVGNTRLVET 101
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match:
A0A6T9YST3_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A6T9YST3_BIGNA)
HSP 1 Score: 86.7 bits (213), Expect = 2.640e-15
Identity = 75/265 (28.30%), Postives = 109/265 (41.13%), Query Frame = 1
Query: 1 MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAMPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGK----LVLDTTSVVQNTDYEYEVSVPATVDTGSRVSGVTWYEVHTMR--KADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEV 777
M V L G V RNW +D GGE H + L H T + LD E + T + P S K L+ + GF+Y+C +G+ LV DT ++ +P + S S + +Y+V + ++ +RF DF L V S GH L S+LP P K KLWT+H + SFV++RR L +YL L + V F +F V E E + K A+++
Sbjct: 1 MGNSVGTL-GWVIRNWR-IDVGGETHWIQLRHYTPTASFELFLDGEEVASERKVTKME---------PISFSIGGADGKVTPSLATYSQITKGFTYKCTFDGQKIPELVFDTQQPESLCEHIKARLLPCAMIRKSGESKIVYYKVEVTNGDPLQKETYVLKKRFSDFEKLDHLVRSSFSGHQLMSNLPPKPSKSVKLWTDHLEKSFVQQRRGELNRYLTKLFNVKKVCANPDFANFFRKPTEEDKFHVDEETDEPDSSKKEAAKI 254
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match:
A0A7S0CUY1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CUY1_9EUKA)
HSP 1 Score: 57.0 bits (136), Expect = 4.590e-6
Identity = 27/78 (34.62%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 466 RRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGM 699
+RF FY ++ K + LP+FP + SK++T+H D F+E+RRK L++++K L ++P +S + FLG+
Sbjct: 67 KRFNAFYGFYRKLSKDFK----KCGLPKFPPRHSKVFTDHNDPVFIEQRRKKLDKFMKELFKIPGMSNQECVLDFLGI 140
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 9
0 1 Expect = 0.00e+0 / Id = 78.28 Expect = 3.20e-242 / Id = 98.03 Expect = 1.48e-64 / Id = 39.94 Expect = 7.00e-59 / Id = 35.99 Expect = 5.43e-46 / Id = 33.97 Expect = 3.26e-44 / Id = 32.64 Expect = 1.46e-15 / Id = 43.40 Expect = 2.64e-15 / Id = 28.30 Expect = 4.59e-6 / Id = 34.62 Sequence A0A6H5JS20_9PHAE D8LMZ7_ECTSI A0A835YSM5_9STRA A0A7S2DHE0_9STRA A0A4D9CLT8_9STRA A0A7S3M5K7_9STRA A0A7S2UVB3_9STRA A0A6T9YST3_BIGNA A0A7S0CUY1_9EUKA back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 172.6 Seed ortholog evalue 5.9e-40 Seed eggNOG ortholog 44056.XP_009038266.1 Model size 1866 KEGG ko ko:K06236,ko:K19069 KEGG Pathway ko04151,ko04510,ko04512,ko04611,ko04926,ko04933,ko04974,ko05146,ko05165,map04151,map04510,map04512,map04611,map04926,map04933,map04974,map05146,map05165 Hectar predicted targeting category other localisation Exons 10 EggNOG free text desc. regulation of pentose-phosphate shunt EggNOG OGs COG0588@1,KOG0235@2759 Ec32 ortholog description Phox homologous domain Ec32 ortholog Ec-16_001220.1 EC 1.1.99.18 Cds size 1866 COG Functional cat. G Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00536,ko01000,ko04516
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348734.5227306-CDS-Ecto-sp6_S_contig101:536421..536563 1682348734.5227306-CDS-Ecto-sp6_S_contig101:536421..536563 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 536422..536563 + 1682348734.532092-CDS-Ecto-sp6_S_contig101:537779..537900 1682348734.532092-CDS-Ecto-sp6_S_contig101:537779..537900 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 537780..537900 + 1682348734.5396206-CDS-Ecto-sp6_S_contig101:538436..538512 1682348734.5396206-CDS-Ecto-sp6_S_contig101:538436..538512 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 538437..538512 + 1682348734.5472946-CDS-Ecto-sp6_S_contig101:540897..541017 1682348734.5472946-CDS-Ecto-sp6_S_contig101:540897..541017 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 540898..541017 + 1682348734.5548894-CDS-Ecto-sp6_S_contig101:541803..541845 1682348734.5548894-CDS-Ecto-sp6_S_contig101:541803..541845 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 541804..541845 + 1682348734.5622396-CDS-Ecto-sp6_S_contig101:542493..542643 1682348734.5622396-CDS-Ecto-sp6_S_contig101:542493..542643 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 542494..542643 + 1682348734.5695965-CDS-Ecto-sp6_S_contig101:543225..543438 1682348734.5695965-CDS-Ecto-sp6_S_contig101:543225..543438 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 543226..543438 + 1682348734.5767384-CDS-Ecto-sp6_S_contig101:544007..544154 1682348734.5767384-CDS-Ecto-sp6_S_contig101:544007..544154 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 544008..544154 + 1682348734.5837739-CDS-Ecto-sp6_S_contig101:544522..544787 1682348734.5837739-CDS-Ecto-sp6_S_contig101:544522..544787 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 544523..544787 + 1682348734.590969-CDS-Ecto-sp6_S_contig101:545089..545679 1682348734.590969-CDS-Ecto-sp6_S_contig101:545089..545679 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 545090..545679 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.819.1
>prot_Ecto-sp6_S_contig101.819.1 ID=prot_Ecto-sp6_S_contig101.819.1|Name=mRNA_Ecto-sp6_S_contig101.819.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=622bp
MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAMPG back to top mRNA from alignment at Ecto-sp6_S_contig101:536422..545679+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig101.819.1 ID=mRNA_Ecto-sp6_S_contig101.819.1|Name=mRNA_Ecto-sp6_S_contig101.819.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9258bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:536422..545679+ (Ectocarpus species6 EcLAC_371)ATGGCTCAGCAAGTGAGCATCCTCGATGGGGAGGTCAACCGGAACTGGCA
CCTCGTGGACAGCGGGGGGGAGAAGCACTTGCTGACGCTTTTTCACGACT
GCATGACAGGGGCGAGAGCGGCCATGCTCGACTATGAGGCGA GTGTGGCG
CATAGGCAGAGGAAGAAGAGTTGCCCCCTTTTGTTGGTGTGGCATAGGGG
AGGTTCATCGGGAGGGAGGGAAGGAGGGACACCGCCTGGGCCGGTGTTCT
TGGGATCTGCTGTTTCGGACAGCAGTCATAAACATACTCTGTTGTTCCGC
ACACCTCTCTTGCCTTGCAATGTAGCCTCGCCTCTCGTACTTTCAGAGGC
GAGTTGCACCGACAGGCCAATCGTGGGACAAGAGGGTCACGCCACCGTCG
CGTGAAGTGCTCGCAGTATGGATGCAACAATGATTGAACAGCGGTGGGCT
TCTGCTGGAGTATTCTGGCGGGATGTTAGCGATGATGAGCGAGTTACTTG
GTATGATGCGCTGCAATGTCGAAACAGCCAAGAGACACGGCAGTTGCCGT
GTGTTTACGAGAAGAGCACGGAGGCTGTGTGACCACGGTGTTGATTGCGG
AGGGAGATCGACAACGTGCCTTGTACGGGGGGTGGGAAAGAGGTAGCACC
AGCTATATGTGCCGTGTCCGGTAAAGAGAAACAGGTGGACCTGCAAACGG
CCTCGAGTGCGTGTGTACGTGAGGGTAGTTGTCGGTGTCGGTACCGAGGG
AGAGAGGACTATGTAGACTGCGGCGGTAGACTACGCACACAGGAGACTGC
GTACCGAGTGCATACAAAGGCCCCGAGGTGTGCAGGCGATACAATAGCTG
GTAGCAGCCTCAGCAGCAGCAGCAGCCGGCTACGCTTGAAAGGGTTGATG
CTGAAAGCCATGGACATGCGAAATGGTTCTTGGCCACCTGCTTCACTGCT
CCTAGGCACGTCAGCAATTGCTTAGAAGAGTGCACACGTGTACTATTTTG
CGAATCGTAGCATGGCCGAATGCGTGTTTCCTCCTTCTTACCACCTTTTT
CGATGTGTGCACTTCGCTGCTCAACCTGTGTCTGTGCGTGACACACAAGA
ATAACTCCTCTAACCAAGACCGCAACGTTGGACTCTTTGATCTGCTATGT
GGTATCGTTTATACCTGAAATCTGGAGCACAGCCTATCCTTCCCCATAAC
CCCCCCTCACGGGGTCCTACATCATGGAAGAAGCGTTTTCCGTTTTCAAT
CGCACCAAGACTGGCGCGACTGTTCAATGGTCAGCCGGTTAGCGCGGCCG
ACGCTAATATTGAGCACACACATACCTGCTGATCGCAAAAAAAAAAACGC
GCAGGAAGTGCCTGGCTCTGCAGGGACTACGAACCTCTTCAACCTTGTCG
CGGGGCGGGTGGACATCCCCTTCAGCATGAAGAAGAAAAGCCCAACGGCA
AAGGACAACGGCCGCCTGAGCATCTTGAG GTGGGTCTCCTGCGCCGTTTT
CGCCGCTCCTGTGTAAGCACCCTAGACCCACCCTGTCGCCAAACACAAAT
TCTACACGCGTATTCCTCCGGCCCTAAATGACTCGCACGTGCCCAGTTGT
CCTCATACCATCTCTCTCTGTTAGTATGTTCCTGTTCTGGCGGGTGGAAG
AGGCGCGTGGGGCCCGGTGTGTTGAGTACGATGGAGGCGAGACTCACATG
CCTGGCATGGCCCTCACGCCATTCCTTGTATTCATCCTACTGTACGCCCG
TTGGTCTTTTTTCCAGTCCGTTTTACGCTTCCTCGTGGGCGGGAACAAAT
ACATTCCaagaataTATTGTGTACATACGCCAATCAACGCTTCACACAAA
CCCTTGTGTTCGTTTCCGTCCTGGTGGGACCGTGATAATCTCGTGCGCGA
TGATCTGTTTCTTTTTTCGTTGTTCGTTTTCGTCGCCGTCGCCACTGGCT
GGACCAAAAAACACACACACAAAAAAAGCGCCACCAAACCTGCTTGCTTT
GCTTGCGCGAGACAGGAGGGGGCTGACCGGGTTCTCGTACGAGTGCGAGG
TGAACGGCAAGCTCGTGCTGGATACCACGTCCGTCGTGCAG GTGTGGTGG
GTGCGGTGATGACGAGCTAGGAGCAGCTGTACTCCAATACAGACTTGTTG
TTCTTTTCTTTTCTTTTCTAGATCGTTGAGGTTCACTGGGCTCCTTGATT
AAAACACATGTCAGCTGTGCGAGCTGTTTTGAGGTTGGAAACCGTCACAC
CGCAGCCGGCAGTCAGCTGTGGGTTTGTCCTGCTGCCTGCTTTTATTTTC
CTCTGCGTCACCCCTTGATGGCACTGCTGTGCTCTCATCAGCCCACTCCG
GAGGGATCACTTGATTGCACGATACTGTAGTTCTCTTGACACCCGTGGGG
ATGCCCCTCAGAAAGGGTACAATCTCCCCAAACAGCTGTGGGGGACGAGA
ACGATTACGATTCCCTCTTTGCATTCACATCGGCGTCGCCGAAGAGTTAT
TTTTGGtTTTTGGTGGACGAGAACCCGGGCTCGAAGCCCGCCGCCACCCT
CCATATTTCCAAAAAGCGCAACACAAAAAAAATGGTGGGGGGCCAAGCAA
CAGGTTTTTGGACTTGTGGAACGACGCGGTGGACGTGCTGTAGGCGAAAC
CGTGTAATCGCGCGCAACAGGAGATTGTGAAGGAGTGAAACGTCCGATCG
GGTCAATCCGCCTTTAATAGGAGCAAAGAAAACGACGAGGAGTCCGACTC
TTGAGTCAATCCCCTGCCGCAGGCCCTGCCCCCTTGTGGGGGATGAGAGG
TAGAGGTGCTCCAGGAGGCACCACGAGGACGGAGCTCAACTTCCGGACGG
GCTGATGGCTGTTTTCTCTCATGCCAAGCGACAGCACGAGGCCAGGAAGG
AGGTGCTGCAGGTCGAGTGCAGAAGCACCATCAGGACGGGGCTCAACTCC
CGGAACTGGCTCACGTCTGTCGTTCCTCCGGTCAACCGACAGCACTACAA
CAAGAGGGAGGTGCTACAGGTCGAGTGCAGCCACTCGACCCGTAGCACCT
CCCTCCTAGCTTGGTGCTGTCGATTGGCAAGAGAGACAACGGACACCAGC
CTGTCTTACCACTGGACCTGTAGCACCTCCCTCCTAGCTTGGTGCTGTCG
ATTGGCGAGAGAGACAACGGACACCAGCCTGTCTGGGACTTGAGCATCTC
GGTCCTGGTGGTACCCCTGGGGCATCTTATCTCGTATCTCTCATCTCATC
CCATCTCCACGGGCGGCAGGACATTGAATGTTGCGCACTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCGCTCCCTGC
TGCGCATCAGCGGCAATGTTGGGGTCGCCGCCGTTCGCTTCCCCAGCGTC
GCCGTCGTCCCTGTAGTCTTCGCCGGGCTTTTCGTTGAACTAAACATGTT
GGATAAAGCATGCAATCAATCGGGGAACTTGGGGTTAGGGATAGGGTGTG
CATACCCCCTGTTCTATTTCCTCATGAGCGTAGTTTCTCGCGAAGGCGGT
TCGTCGGTGCTGGTGGTGCTGTCGGGGTCCGAGCTCACGGTGGGGTCAGA
CACTTGCTCCGCGCGGACTCCATCCATCTCTTCATACTTGACGTCTTTTG
TAACCGAACAGTGAACAAGACTTTGAATGCAAAACAAGGGAAGGTTTGAG
GTTTTGAGACCTACGGCGGGCACGCGCACGGCTCTTACGAGTAACCTGTT
TTGTTTTGTTTTTTCGCAATCTTCAGGCGGCGAATTCACCGCACTGTTGC
CCGGCGGAGTCTCTCGACGCCTACCTAACTGTAGAATTCTACCCTCCCCA
ACAGAGAGGAACCTCCCGTCCAGAACTCGTCTAGAAGTATTTGTTAATAG
CAGCTTCTGTGTTCCCTTTGAATGTGTGCCGAATACCGTGGATTATTTTC
GCCCTCGAGATCCATTCCCCATTTTTCCGATTGCTATTGTTGTAAAAGTC
TGTTTCTCTTGGCTTCAACCCTCCGCCTTCGTTCCAGCTCGCTCCCTCTC
TATCTTCTTTTTCTCTTGGGTTTTGCTCAACCTCATCGTGTGCGCCACCA
CGAAAGCCCCGAGCAGCTGACCCCCTCCCCTACAACAACCTTTCTGTTGA
CCCCCGTTGTCCCGCGCTTGTGCGGTTCTTGAACATGTGTGTCATTTCTG
CCAGTTTTTTTCACCCCTCGACAATAAACCGTTCAGTTTCTCTGCTTTTT
TCACCCCTCGATCACAAACCTTTCATTTTCACCGCCTGTTTTTGCGTCAC
CCCCTCGAAAACAAACCTTTCATTTTCTCACCCTGTTGTTTTGTTTCACC
CCTCGACAACAAGCTTTTCCTTTTCTCTGCCTGTTTTGTTTAACCTCTCG
AAAGCAAACCTTTCCTATTCTCCCCCTGTTTTTGTGTCGCCCCTCGAAAA
CAAACGTTTCCTCTCTATCTGCCAAGAACACCGACTACGAGTACGAAGTC
TCAGTACCCGCGACCGTGGACACCGGCAGCAGGGTTAGCGGGGTAACCTG
GTACGAGGTGCACACCATGCGGAAGGCGGACAGCAAGGGGACCCTG GTGA
GATCCGGTGTAACGGCCGGGGACCTGGGACACGCTCTGTATGTCCCGGGG
GGGGGGGGTCTTAACAAATGATCGAGTCTTTGTATGACGGCGTAAGTGAC
TGATCTTATCATGTAGGGCACCGGAAATCATCCTGATGATGGATGACCAC
ATGAAAAGCTAGCTCCCTTTGGTCCTTGGCCTTGCTCTGCCGATGATACA
CACTATACCTCGTTTCCTTCAACGTGCCACAATGGCTCTAGTCCTTGCTA
CTGCTCAAGTTTCCGTTCGTCTTTTTTTGTTCGGATGGTTTAAGATTCTA
GGTGCAAATGCGCTTCTCATGAACTGATCGCCTTGAGTGATTTTTTTTCA
AATGTGTCGGCACTCATTCCTTCCGTCGGCCGTGAGTGGTTTGCGATGGA
CAATTCAATTTTTTTTTCTTGTCCACGCGGACCCGCCGCAGAAGAGCCCG
ACCTCGCACCCTTGTTTTGGCCTACAGTATGTATAAAGTAGCACGTTCGA
ATCTGGAACTGCCTGCCGTGGGTTGCCCGGAGGCTGCACTGACTGCGGTA
TGGGCCTGGCAGCGACCCCGCCCGAAACTCGGGTCCACATGTGGCCGTGT
TGGTACATATTAATAGTTACAATAGTTTACGATCTCATCGACGTGTCGTT
GTGGCCATCCTTTGTTCAAAGCACTACCGACTACAGTACGGACTTACACA
CACACCGCCGCCTCCTCTTCGGGATGGCTGTTCGTAGATCCGTGAACTCA
GAAAGACAAAACAACGTGCAAATTCCGAACAGGTTCACCGGAGGTTTCGA
GACTTTTACGCGCTTCAGGAGCAG GTGAGGGCAAGGAATGCGGCGTAATA
GACTCGGAGGGGGGGGGATCCGGGACGAACAATGGTGCTCGGTGTTGCTG
TATTTCTCGCTTTGTGGTGGGCTTCGTGTATGTGTACACCTACCTGTCTG
CTCTCTTCGTTGCTGTACTGTTTCGAGGAGAATATCGATGCTTGGGGCTG
TGTCCTCCTTCTCGAGGACGCCGCTCATCATCAGCACACACTTTTCTCAG
CTGTCTCAGGGAGGCATGCGTTCGAACAGCCCTGGTTGCAGCCTTATCAA
CGGTGGCTGCTGTGTGTACGGGTGTTGGGGAGAAGGGTAGGTCTTGGAGA
AAAAGGAGCCAAACTCTTGAGGGGGCGAGCTTCACATGGACGAGAGCACG
ACATGGTTCTGTTTCTCTTTGGGTGGCATCACCAGCTTCGAGAGGGGTCG
GGACAAGCCGAGAACGCTCTCATTAATCCGCTTTTCTCTTACAACTAATA
CCATAAAATACTCCGAACTATATTCATTTCTTCCGGCCGTGATAGCCCAC
CTTTTCTCCCTCCTGAAATCAACACGTTCACTTGCACGACCTCTCTTGAA
CCGTCGCTACTACTGCTGTCCCATCTGCGGCAACCATGTGGTCCTTGATC
GATCGGGTGTGCCGTGCCGCAGGTGGAGTCGCTCATGAAGGGCCACCACC
TGCGGTCCTCCCTGCCCAGGTTCCCGGGCAAGAAGTCCAAGCTCTGGACC
AACCACGGCGACGTGTCCTTTGTCGAGGAGCGAAGAAAGGCCTTGGAGCA
GTACCTCAAGACTCTACTACAG GTGAAGAAAATGCCAGGGGGGGGGGAGG
GGTACCCATGCATGCCGTAGGCGTTAGACGATTGACTTGGCGTTCCTGCG
ATGCAGGGACGGAGTGATATGCCGGGTGATCGCCGGCCCAGGCTAAGTAA
GGATGAACCAGAAGCTGGTCATCATCCTTGCGGCCTCGAGGTGGGGGGGG
GCTGTGTTGGTAGCAAGTGGGGGCGTGGGCGGTGTGAGGTGAAGTGACAG
CATTTGCGCCGCGTCTCCCCGTGCAGCAGGCTATCATGCTTGTTTGGTCA
GCGTGCCCTACCTCTGCGTCCTGTAACTGCCGTGCTCTTGGTTCCTCGAG
CTCCGTGGCTACTGGTCGGTTTGTGGCTAGCTGCGCTCGCGGGGTGCGCG
ATGACGACCCTGTCCATCTCGCGTTTTCTGCATACTCTATCTACAATCTC
AGCATCTACGTACGCGATCTACGCTTTTCGATATTTTAGTAGATGTGTGC
TGTCCCATCTCCGCCGCTAGCGTAGTGCCCTCCCCCATTTCACGTATCTT
CGTGGCACGCCGAACGTCCTCCTCGAAATCGACAACCACGCCACGCCACG
CCAGCTTCCTCACGTGAGCACCCTGGACTCGACCCGAGCCTTCCTCGGGA
TGGTGGGAAACCTGCGAGAGTTCTCCGTGTCGTGGGAGGGGAAGGAGCTC
GGCGCCAAGCTCAAGCGAGCCTCGGAGGTGGCGGGCGGAAAGCTGGGCGT
CGGGGGAGCGGGCTCGACCGGCCCGAACGGGGACGGAGGAGCGCCGCCGG
TGATCACCGCTGTGCTG GTGAGAGGCAGGGCCTGTTGGCAGCAGTAGTAC
CCAAGCTATGACAGTTGAGCGCGATATGCGCCGGTGATTACCTCTGTGTC
GGTGAGAGGCAGGGCCTATTGCAGCGGTAGTACCCACGCTATGACAGTTG
AGCTTGAGCGCGTCATGTGTGTGTGCTGGTGCCGGCAATCAACCGTAGCT
AGCGAACACGTGGGCAGCTTATAGCAGAGGTGGGAGGGAGACGGTGGAAG
GAAGGGAGAGATAAGGAGCACCATCGCTGAGGATTGACAGAAACGAAGGC
GGTTTGTTATCCTAGTACTGTGCAATATTCAGCCACCTCTACCTGCGGAT
GCCCCTGCCCCTGCCCCTGCTGCCCTATTTGGGCCTGTATAAGGCGTGCC
GTTCATAGCGGTAGTCGCTACACAAGTGTATTGCGATGTAAATGTTGTTG
AAACATGCGGCCACTCATTAGCTCTGTTTCTTCATGCTCGTGAGCCCCCC
CACCGCCCGCTCGGCTCTTGAACTTTGCCTAAATGCTAAACTTGATGTAA
CGTACCCTATCCCAACTCTCTCTGTGTCGGGAAAAGGGCAACGGGAGATC
ACCACCTGGGGTATGTCCGGGAGACCGCCTGTTCAAGGTTAATGGAGACT
CGACGGAGCTCATGTCGCTGGAAGCCGCCTGGAGTTCTGTGGCGCGGGCA
ACGCGGCCGGTGATGCTGCATTTCTTGGGCCCG GTGAGAGGGCTTGCTGT
GAGGATGAATGTAAACGGGGGGCGAGTGGCGACGTCCGGACACACCGAAG
CTTGTTGTGGCCCTTGTCGGCACGCTCCCTTTAGAGCATGCCACCTTGCG
ATATGTCGCGTCATGCCTCCCAGGAAACGCAAACGCTTGCTTCGCGTCCC
CCGCCTCTAGCGTCTTGTCCGAACCTAGACGTACTTTTCTTTTTGGATCT
CATCACTTGTTTGTGCTGATCTCCTGTTCCTACTGCCATGCCCACGAAGA
AGCCCCAATCGAAAACAATACCCGTTTTACACCTTGCCCGCCCGTCCCCC
TACCTGTGCCTCGTTTCACGCTGGTTGTTTCCTCCGCGGATTGGCTCACA
GATCCTCCGCATGGATTCGACCCTGGCCCCGCTTCCCGAGGCGTTTCTGC
GTCACCGCACCCCCCCGGGGCGGCCACTCCAATCCACGGGGCCCCAAGAC
GGCGGACCTCCGCTCGCCGGAAGCTTCCTACGCCCAAGCGGCAGCGGCGG
CGCTTCCGCCGCGGGCCCCGCCGGCGCTGCTGGCGGTGTTGACGGTGGCC
AGTGGAGCCTAAGAGGCATGCTGCCGGCATGGAGCCGGGAACAGCCTTCG
AAGCCCGGGGATGGTA GTGCGCTGGCCCCGGCTCCGCCGCCCCTGGGCGA
GGGTGGAATCCCCACGAGAATCCGGGGGAGCGAATAGGGAACGGGGTGGG
TCGGGGTGTCGCGGTGGGACCTTTCGGGAACGGTACGGGAGCGGCGGCAG
CCGGCCGGACCAACCCGTCGAACTCCAGCCTCTTCGGGGGGGACGCGACG
CCGGGCCTTAGCGGAGGCGGCATGGGTGGTGGGGCGAAGCAAGAGAGTTT
GTTCGACAGTTGGCGATCACCggGGGCGGCGGCGGCGGCGGCGGCGGGGG
GGGGGGCGGGGATGGGAGGCACGTTGCGTCAAGCCCCCGGGAGTTCGTTC
GGAGGCGGTGGAAGTTCTCGGGGAGGCTCGGCTTGGACGCCGGACATGTC
GCGCGGCTCGGGAGCGTCTGCCAGTTCCTCTCCGCCGGGTAATCTGTTGG
GGGCAGGAGGAGCGGTACCGACACCGTCACCCCCTCGAGAAGAACTAGCG
GGTAGCGGCGGCACCTCCAATGGGAACTCGGGAAGAGGGCCTACGGATCG
CCCGGCAGGAGGAGGGCTATTTTCGGCGGCAGGATTTGGTGGCGAGAACG
CGGTTTTTCCAGTGAGTAGTGGCGGGTCATCCATGGCGGCGTCGCCAGCA
TGGCCGTCCGAGCAATCGAACGCGCGGCAGGGGCGCGCGGCCGGGGCAGA
GGGAAGGGCAAGAGCCGGCGAGAGCAGCGGCGGGAGAAATCTCGCTGTCC
CAACGTTTTCTTCTAGTCTTGATACGGGAGCGAGACTCACGTCGGAGGTA
GGACGATCTGGTGGAACGTTTGTTGGCACGACCACCCTCGGGGAGAGTGG
TGACCACCATGGGTTTGAGGAGGAGGACGGCGAAGAGGAGGAGAATCCCT
TCGCGTAG back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:536422..545679+
>mRNA_Ecto-sp6_S_contig101.819.1 ID=mRNA_Ecto-sp6_S_contig101.819.1|Name=mRNA_Ecto-sp6_S_contig101.819.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1866bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:536422..545679+ (Ectocarpus species6 EcLAC_371) back to top