Homology
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match:
D7G2U5_ECTSI (Autophagy-related protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2U5_ECTSI)
HSP 1 Score: 226 bits (575), Expect = 2.450e-66
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 1
Query: 1 MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
MVSFKQEHSA DKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG
Sbjct: 1 MVSFKQEHSA-DKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 115
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match:
ATG8_PHYIN (Autophagy-related protein 8 n=19 Tax=Peronosporaceae TaxID=4777 RepID=ATG8_PHYIN)
HSP 1 Score: 189 bits (479), Expect = 9.290e-53
Identity = 92/116 (79.31%), Postives = 105/116 (90.52%), Query Frame = 1
Query: 1 MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
M SFK+EH +KR++EA+RIR+KYPDRIPVICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct: 1 MSSFKKEHPF-EKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match:
A0A835Z040_9STRA (Autophagy-related protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z040_9STRA)
HSP 1 Score: 188 bits (478), Expect = 1.370e-52
Identity = 94/114 (82.46%), Postives = 103/114 (90.35%), Query Frame = 1
Query: 7 SFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
SFKQEH +KRK+EAERIRAKYPDRIPVICEKAD+SDIPDIDKKKYLVPADL+ GQFIYVIRKR+KLDP+KAIFIFVNDTIPQTSALMSQ+Y + DED FLY+ YS E TFG
Sbjct: 6 SFKQEHPF-EKRKAEAERIRAKYPDRIPVICEKADKSDIPDIDKKKYLVPADLTVGQFIYVIRKRVKLDPDKAIFIFVNDTIPQTSALMSQIYADKADEDMFLYVKYSSEGTFG 118
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match:
A0A0P1A6U3_PLAHL (Autophagy-related protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6U3_PLAHL)
HSP 1 Score: 189 bits (479), Expect = 2.880e-52
Identity = 92/116 (79.31%), Postives = 105/116 (90.52%), Query Frame = 1
Query: 1 MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
M SFK+EH +KR++EA+RIR+KYPDRIPVICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct: 28 MSSFKKEHPF-EKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 142
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match:
M4BR17_HYAAE (Autophagy-related protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BR17_HYAAE)
HSP 1 Score: 189 bits (479), Expect = 5.850e-52
Identity = 92/116 (79.31%), Postives = 105/116 (90.52%), Query Frame = 1
Query: 1 MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
M SFK+EH +KR++EA+RIR+KYPDRIPVICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct: 58 MSSFKKEHPF-EKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 172
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match:
A0A7S2GCN7_9STRA (Autophagy-related protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCN7_9STRA)
HSP 1 Score: 186 bits (472), Expect = 8.240e-52
Identity = 90/115 (78.26%), Postives = 104/115 (90.43%), Query Frame = 1
Query: 4 VSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
+SFK EH D+RKSEAERIR+KYPDRIPVICEKAD+SDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PE+AIFIF+ + IPQ ++LMS +YE +KDEDGFLYITY+GENTFG
Sbjct: 1 MSFKSEHPI-DRRKSEAERIRSKYPDRIPVICEKADKSDIPDIDKKKYLVPADLTVGQFMYVIRKRIKLPPERAIFIFIRNVIPQQASLMSTIYEEEKDEDGFLYITYTGENTFG 114
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match:
A0A024TY39_9STRA (Autophagy-related protein n=17 Tax=Oomycota TaxID=4762 RepID=A0A024TY39_9STRA)
HSP 1 Score: 186 bits (473), Expect = 8.250e-52
Identity = 90/116 (77.59%), Postives = 105/116 (90.52%), Query Frame = 1
Query: 1 MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
M SFK+EH +KR++EA+RIR+KYPDRIPVICEKADRS+IPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T++LMS +YE QKD DGFLYITYSGENTFG
Sbjct: 1 MNSFKKEHPF-EKRQAEAQRIRSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTASLMSNIYEEQKDSDGFLYITYSGENTFG 115
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match:
A0A7S3ZPI7_9STRA (Autophagy-related protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPI7_9STRA)
HSP 1 Score: 186 bits (471), Expect = 1.140e-51
Identity = 90/115 (78.26%), Postives = 105/115 (91.30%), Query Frame = 1
Query: 4 VSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
+SFK +H D+R+SE++RIRAKYPDR+PVICE+ADRSD+PDIDKKKYLVPADL+ GQFIYVIRKRIKL PEKAIFIFV++ IP T++LMS VYE QKDEDGFLY+TYSGENTFG
Sbjct: 1 MSFKADHPL-DRRRSESDRIRAKYPDRVPVICERADRSDVPDIDKKKYLVPADLTVGQFIYVIRKRIKLPPEKAIFIFVDNVIPPTASLMSAVYEVQKDEDGFLYVTYSGENTFG 114
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match:
A0A5P9K6H3_9STRA (Autophagy-related protein n=2 Tax=Nannochloropsis TaxID=5748 RepID=A0A5P9K6H3_9STRA)
HSP 1 Score: 186 bits (471), Expect = 1.470e-51
Identity = 94/116 (81.03%), Postives = 102/116 (87.93%), Query Frame = 1
Query: 1 MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
M SFK EH DKRK+EAE+I +KYPDRIPVICEKADRS+IPDIDKKKYLVPADLS GQF YVIRKRI+L PEKAIFIFVN+ IP TSA MS +YE +KDEDGFLYITYSGENTFG
Sbjct: 1 MSSFKAEHPL-DKRKAEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLSVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTSAAMSAIYEERKDEDGFLYITYSGENTFG 115
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match:
A0A8J5XTM3_DIALT (Autophagy-related protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XTM3_DIALT)
HSP 1 Score: 186 bits (471), Expect = 1.520e-51
Identity = 92/119 (77.31%), Postives = 105/119 (88.24%), Query Frame = 1
Query: 7 SFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG*NERP 363
SFKQEH A +KRK+EAERIR KYPDRIPVICE+A+++DIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIFV + +P T+A+MS VYE KDEDGFLYITYSGENTFG + P
Sbjct: 6 SFKQEH-AFEKRKAEAERIRLKYPDRIPVICERAEKTDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVGNVLPPTAAMMSSVYEANKDEDGFLYITYSGENTFGGDPDP 123
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.45e-66 / Id = 99.14 Expect = 9.29e-53 / Id = 79.31 Expect = 1.37e-52 / Id = 82.46 Expect = 2.88e-52 / Id = 79.31 Expect = 5.85e-52 / Id = 79.31 Expect = 8.24e-52 / Id = 78.26 Expect = 8.25e-52 / Id = 77.59 Expect = 1.14e-51 / Id = 78.26 Expect = 1.47e-51 / Id = 81.03 Expect = 1.52e-51 / Id = 77.31 Sequence D7G2U5_ECTSI ATG8_PHYIN A0A835Z040_9STRA A0A0P1A6U3_PLAHL M4BR17_HYAAE A0A7S2GCN7_9STRA A0A024TY39_9STRA A0A7S3ZPI7_9STRA A0A5P9K6H3_9STRA A0A8J5XTM3_DIALT Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 226.1 Seed ortholog evalue 8.5e-57 Seed eggNOG ortholog 2880.D7G2U5 Preferred name FMN1 Model size 2558 KEGG ko ko:K08341,ko:K10367,ko:K13335,ko:K16578 KEGG TC 3.A.20.1,9.A.17.1 KEGG Pathway ko04068,ko04136,ko04137,ko04138,ko04139,ko04140,ko04146,ko04212,ko04371,ko04621,ko04727,ko05167,map04068,map04136,map04137,map04138,map04139,map04140,map04146,map04212,map04371,map04621,map04727,map05167 Hectar predicted targeting category other localisation GOs GO:0000003,GO:0000045,GO:0000139,GO:0000149,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000407,GO:0000421,GO:0000422,GO:0002790,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005776,GO:0005794,GO:0005829,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006888,GO:0006891,GO:0006914,GO:0006950,GO:0006979,GO:0006995,GO:0006996,GO:0007005,GO:0007033,GO:0007034,GO:0007154,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008289,GO:0008429,GO:0009056,GO:0009267,GO:0009306,GO:0009405,GO:0009605,GO:0009653,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0009991,GO:0010506,GO:0010508,GO:0012501,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016236,GO:0016237,GO:0016239,GO:0016241,GO:0019222,GO:0019898,GO:0019899,GO:0019954,GO:0022411,GO:0022607,GO:0030154,GO:0030435,GO:0030436,GO:0031090,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031386,GO:0031503,GO:0031667,GO:0031668,GO:0031669,GO:0031984,GO:0032258,GO:0032502,GO:0032781,GO:0032940,GO:0033036,GO:0033365,GO:0033554,GO:0034599,GO:0034613,GO:0034629,GO:0034727,GO:0042221,GO:0042594,GO:0042886,GO:0043085,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043462,GO:0043562,GO:0043934,GO:0043936,GO:0044085,GO:0044093,GO:0044237,GO:0044248,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044804,GO:0044805,GO:0045184,GO:0046903,GO:0046907,GO:0048102,GO:0048193,GO:0048518,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051117,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0061024,GO:0061025,GO:0061709,GO:0061726,GO:0061912,GO:0061919,GO:0065007,GO:0065009,GO:0070727,GO:0070887,GO:0070925,GO:0071211,GO:0071496,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0098588,GO:0098791,GO:0098805,GO:0098852,GO:1903008,GO:1905037 Exons 5 EggNOG free text desc. cellular response to nitrogen starvation EggNOG OGs KOG1654@1,KOG1654@2759 Ec32 ortholog description Microtubule-associated anchor protein involved in autophagy and membrane trafficking Ec32 ortholog Ec-16_001520.1 Cds size 351 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko03029,ko03036,ko04121,ko04131,ko04812
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348728.9255567-CDS-Ecto-sp6_S_contig101:61826..61857 1682348728.9255567-CDS-Ecto-sp6_S_contig101:61826..61857 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 61827..61857 + 1682348728.9381201-CDS-Ecto-sp6_S_contig101:62921..62980 1682348728.9381201-CDS-Ecto-sp6_S_contig101:62921..62980 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 62922..62980 + 1682348728.9469886-CDS-Ecto-sp6_S_contig101:63883..63965 1682348728.9469886-CDS-Ecto-sp6_S_contig101:63883..63965 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 63884..63965 + 1682348728.956624-CDS-Ecto-sp6_S_contig101:64317..64407 1682348728.956624-CDS-Ecto-sp6_S_contig101:64317..64407 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 64318..64407 + 1682348728.9657848-CDS-Ecto-sp6_S_contig101:64782..64871 1682348728.9657848-CDS-Ecto-sp6_S_contig101:64782..64871 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig101 64783..64871 +
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348728.9746048-UTR-Ecto-sp6_S_contig101:64871..67078 1682348728.9746048-UTR-Ecto-sp6_S_contig101:64871..67078 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig101 64872..67078 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.778.1
>prot_Ecto-sp6_S_contig101.778.1 ID=prot_Ecto-sp6_S_contig101.778.1|Name=mRNA_Ecto-sp6_S_contig101.778.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=117bp
MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYL back to top mRNA from alignment at Ecto-sp6_S_contig101:61827..67078+
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig101.778.1 ID=mRNA_Ecto-sp6_S_contig101.778.1|Name=mRNA_Ecto-sp6_S_contig101.778.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5252bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:61827..67078+ (Ectocarpus species6 EcLAC_371)ATGGTGTCGTTCAAGCAGGAGCACTCGGCAG GTATCTGTTTTTGATAGAA
GACCACGACGAGAAGAACATGCGGAGAGTTGTCGAGTTTTTTTTGTCTCT
CTTCTGCTCCCTGCCCGACAGGTTCAAGCGACCCGCCTAGTTATGCCCTT
GACCTATCCCCAGCGGAAGTCTCGACGGACGCCCGAGGCCAACAGCGTGG
ATTTGGGATTAACACTCCTCACGCGAGAGAGACGCTCATTCATTTGTTCG
TCGTCGATTGAGCGGCGCTTTATTTTCCTATCCCTACCCTCCTTTTCTCT
CGAGGCCGGGCAAGTTTTGGGAAGTTGGAGCTCCTCGACGTACTGCTGTA
GCTCTGTCCACGTGGTTGAACAACAAGCCCACGCTGCGCTCAGCACATCG
GAGAACCTTTTCACTCGTTTCAAACACTTGGTAGTAGGTCTGGCGGCGCG
AGATCCCTAGCACTTGGCTGTTGAATCGCGCGAGGAGGAGGAGGTGGCTC
TCGCGGCGACCATCAGGAACGACGCTGACTTTTTCAAGAATCGTTCGTAG
TAAAAAAGCATGTCATCGTACGACCTCGTGTGCTGGATACTGGATACTCT
CCTCTCTCTTTCTCCGCACCACATCACGAACCCAGCAGTTACGCTCGACG
TCTGCGTGTACCTTGGTGGAGCCCGTGCTTTTTTCTTTGTCCGCCGTTCC
TCTTCCACGGTACCACAAGTAAAACTCGTAGTTTTCATTGAACATTTGGG
ACTTGAACTTGAGTTGAAGCTTTTTCTTCTGAAAAAATGCATGCGAGGCA
GATACGCATCATACGTGTGATTCTTGGCGCCATTCTGCTCTCCTTCAGCA
GTGTTGTCTCTACAATTCTTCGAGTTTGGCTGCTCTCTGCACGCTCTACC
GCCTAGCACTCTATAGCATGTTTTTCTCCCCAGCATCACCAAAGCCCGCT
TGGCAAGGGGTTGGCTAAGATGCCACACGCTTCTCTAGTCGGAAACCCTC
ACTTGACACACACTATTATAATAATACAATTTTACCAATCGCTCGTACTT
GCCGCTGCTCACCCCCCCGCCGCCGCCGCCTGCCTCGGCCGAGAGCAGAC
AAGAGGAAATCGGAAGCGGAACGGATCCGTGCCAAGTACCCGGACAGGAT
TCCA GTGAGTACCAGATGCTGTAGAGTACGTGGGCGTTATGGCGCGCTGC
TGCTGTACAATAGAGCCGCTGCTTGCCCCAAGAGGCCACAGACGAGTCGA
CATCGACACGTAAATAGGTGGACACCCGTACCGTAGGTGATATGACATGA
AACTAGATACCACACTCGCTGGACCGATTTTCGAAGCTGAAGTACTCAAC
AGGGGGAAAAAGAGATGCTTATTAAATCGTGGCGTTGGAACCGTCTCGTC
GAGAGCTTTCCGAAAATGGAGTATCAGACATCCTCTCCGTCGTGGAGAGC
TTTGATATTCTGTCCTGGGGGTGTGATATCTCATGTCACCAGCGGTGGCT
CACTGGCTGTGTGTATAGCTCGTGGCATGATGTGTCTAGAAAAAAGAGCG
AGAGTCCGGACGGAGGCAACGATGACGATTGACTTAACACTGCTGTTTAT
AGAGTGCTTTTTTGGGTGGGGGGGGGTGATGACCAGAGCGAGATGTACTC
CCTCTGTGTAGGTTTTGTATGGTGACTGTGGGGGTCGGGCTCTGGGTTGA
CAGTAGGACAGACACGTGGCAAATAGCCTCTGTGCGGAGAGACCCAGGCC
GGATTGTTAAAAATTGAAAGAGGCAACGTGGAGAAGCAACCGCAAGGCTC
CGATGTCGACTCAGGTTCACGTTTTCCAGGCAGATGCGCTCGTTCACGCT
GGCAGGTTCTACAGGAGCTTGTGGTTCGTCAGGACTTTGTGTCGTAGGGC
CCTTGCGGCTGTCCTTCCGAGTGTGCCACCGTGCTGATCGACCTTAAGCC
ACCGTGCTGCGTTCGCGGCTCTTTCAGTGGCATCTACGAGGCACGACGTA
TGGCTCCGCTTAGCTTGGCTGGGTGGTTTTCCTTTTTTTTTTTGTGTATT
CTCCCAGGTGATTTGCGAAAAGGCAGACCGCAGCGACATCCCGGACATCG
ATAAGAAGAAGTACTTGGTGCCCGCAGACCTTAGCACTG GTGAGCGGGAG
GGTGGTTGGGCAGGGGGAGGGGAGGCGATGGTATGTGGTGGGTGGTTGGG
GGCATTAAAATAGTTGAGGTTTGGTTTATGGTGGAGAGCTCATTTCCCCG
TACACACGTGCCACAAAACTGCCTACCTCCGACCTCCAGCTACCGTGATC
GCCCCCGTTGGTTGTTCCCTTGTGTGCCAAGGCAGAGATTGTTTTACCCC
AACACAACACGCAAAGGAAACCCGGTCTTTTTACCCTTTTTGCACGCACG
ACCAGTTCCAGAGACGTGATATATCTTGTCTTGCCGTCACTCGTTGATTG
AGATGGTCTCCGCGATACCCTCGCTTTCTCCCGTCACCCAGGCCAGTTCA
TCTACGTGATCCGCAAGAGGATCAAGCTGGACCCCGAGAAGGCCATCTTC
ATCTTCGTCAACGACACCATACCACAGACCT GTGAGTGATGGCGGTGATG
GGGGGGGGGAGGGTGTCCGTGTCAATCAAGATTTTTTATTGCGTTGTTGG
TGTAGTGTTGGGTTTAAGGTTACTAAAGAAGAGGAATTATTAAAAGAAGC
TTGACCCTGAGAACCGTTGCCCAGCAGATCAGAACCCTACCATGAGCACC
TAGCCGCCGTTGGGCAGCCACTCAGGGGGGAATAAGAAACGAGCCTCAGA
AACAATAATTGGATCTTTACAAGTGACGGCGCCTGCTGTCTATTGCGCCT
CATCACTGGCCCTGTATCGTTTGCTCGTTGCTCCTTTCCACGCGCTCACC
GCTTTTTTCGAACCGCTGCTGCCCCCACCGCCGCCTCCGCCCACACACCA
TGCCAGCTGCACTAATGTCTCAGGTATACGAACACCAGAAGGACGAGGAT
GGCTTCTTGTACATCACCTACAGCGGAGAAAACACGTTTGGGTAA AACGA
AAGGCCAGCCGGTTGCCGGCTAGCGAGCGACCGGGCTGCTGTACAAAAAG
AGGGCACTTTTAAAATTCCGAGGCAAAAAAAAAATGAACAAAAACGTCAC
GGAAAAAGGACCGGATCGATAGGAACGTTGTGATGGTCGAGATTTTATGC
ATAGCTCGTCTTGTTTTGATTTGCGTACTGGCCGGGTTTTGGGGGGAATG
TCGGCGGGGGGATGGAGGTAGGGTGGTGGGGTCCTCGAGCCAAGCCACTT
CACATGTCCACCTACGCAAGCGGAGCACAGATGCCCATCGTGTAGGCGAA
GTGTTGGTCCACGTGTACGGATGTAAGGATGTCGGGGAGAGCACGAACCT
GTTTCGGTTGGATGGGAGATTTCGGAGACTTCGGATGCTGCAGAGGTACT
CGAGGAGGAGGAGGAGGAGGAGGAAGCTAGTGTGTTTGGCGTAGCAGCAG
CAGCAGCAGTTGGGGTCGCGGTGTTTTGGGCTGTGAGGCTGATTTTGCCC
GGAAGGAACCGGCCGGATCTCTCGGGGGTGCTAACAGCCGACCGGCCCGC
TTGATTGTCTCCGTCCTTGTCGTGGACGATGGTGGGTGTTCGTGAGTCGG
AGTCGACGGGGCCGCGCGTACACGATGCTACCGCCAGGTCTGGCATGGAT
TTTCGGGGAGCACGTTACAAGTACCATTATAGAAGGTTGGGCGGCGCAGC
TGCTGCAGAAAGCCATAAGCGTGATGACCTTCCAAGAGCAGCGTAGCAGG
GGGGGGAGTGATTGGTGATTGGTTGGTTGGAAGAGGATTGTGTTCGCTGG
CCGCAGCCAGCAGAATGAAACCAGATGCCGACGGGATGGGTATTCCTGGG
GGGGAGGGGGGGTGAACAGTAAGCAGCGATTTGGATGGTGATGGTTGTTT
TGCGAGGCGTCTCCTGGGTTGGCGCGTGTCTGGGCGGGTGGTCACTCGTT
TGTTGTTTCGGCTGCGAGAGAAAGAGCCGCTCTGCTGGCTCTTCGGTTCT
ACCGGTGCCTTGGACCGTCCGGGGCGGGGCGCTCCTGTGCCCTGCTTAGC
TCTTTCGTGCGTACGATGGCGTTATCGCGGACGAACACGTCGGTAGGGCC
TGCGTTAGCTGGCTGCCCCTGACGGGCGGGGGGCGTTGGTAGGCTCGCCG
TAAAGGAAGTTCAACCGTATCTCGTAACACGCGTTGCCTGGTTCGTTGTC
GTGGCCGCAAGGAAAGAGATGGTTCAACCGCAGTACATAAAAACCGAAAA
TGCTTGGTTTGGTTCCCGGAGACTCGAGTGGTGTGGATCTTTGGGCTTTC
TGTTCTGGTCGCGGGGTGGCACCAAACACGTGCTGTACCACAAGTCATAT
CGTCGTATATAATGTACATCTGTAAGGTTCTTTATGGACTCGTGTAAGGT
CGTCAAAGGAAGGCGCGCGACTCAGGGAGAATGGGTTGGAGGTTGTTCTT
CTCGCTGAATAAGCGCGGGGCATGGCCAAGAGCACGCCTGACATGCCCCA
ACAGACAGCGGTGTTGTCTCCATCCTTGTTTCAAACCACGCACAGCTGGT
GTTTACTGGGTGGCCGCGCAAGAGTTTTGCGGCCGGCGGCATGGTTGGTT
CGTTCGTTGGTCCTCCTGTCCGGAAAGAGTTGCTGCGCTGAATAAATAGT
GTCGTATGGGCTGCTGTAGTTGTTCTAGAAGGCGTTGTTTGTGTCGGCGG
TGTTGTTGTCGCCATGGACGCGGGCAGCGGAGAACGCGTACTTGCGCCAT
GCTGACGGTCTGAAAGAACAAAAACGAAAAATGTATATACAACACATGCA
AACCGGGTGTAGCGATCCAGGAGGACTGACTGCTGCGCCTTCGCTTTGAC
GTTTTGCAATTCCGCACGACGAGGAGCGGATCGAGAGATATCTACCGTCA
CTCGCCAAACACTTGTCCGTTGTGCTCGAGTGCATCGACGCAACAAGTCG
GCAACAGGCGATCCGATGTGTACGTGTGTTCGTGTTTCTTTTTCACGAGA
GAATCCTAGGTACGTATTCGAGGGTTCTTTTTCCTTCAGTGTAGGGAATT
ATCTGATTAACCTTACCTGCATGCAGATATCAGAGCCATTTTATTCGCCT
ACTTGAAGGTCATTATGGAGCGACATGTATCTTCTTTCAGCGGGATCATG
TTTTTCCAACTTTACGACCCCACAGCGTGCCATGCCCCGACTGACTCCCG
AC back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:61827..67078+
>mRNA_Ecto-sp6_S_contig101.778.1 ID=mRNA_Ecto-sp6_S_contig101.778.1|Name=mRNA_Ecto-sp6_S_contig101.778.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=351bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:61827..67078+ (Ectocarpus species6 EcLAC_371) back to top