mRNA_Ecto-sp6_S_contig101.778.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match: D7G2U5_ECTSI (Autophagy-related protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2U5_ECTSI) HSP 1 Score: 226 bits (575), Expect = 2.450e-66 Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 1 Query: 1 MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
MVSFKQEHSA DKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG
Sbjct: 1 MVSFKQEHSA-DKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 115
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match: ATG8_PHYIN (Autophagy-related protein 8 n=19 Tax=Peronosporaceae TaxID=4777 RepID=ATG8_PHYIN) HSP 1 Score: 189 bits (479), Expect = 9.290e-53 Identity = 92/116 (79.31%), Postives = 105/116 (90.52%), Query Frame = 1 Query: 1 MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
M SFK+EH +KR++EA+RIR+KYPDRIPVICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct: 1 MSSFKKEHPF-EKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match: A0A835Z040_9STRA (Autophagy-related protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z040_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.370e-52 Identity = 94/114 (82.46%), Postives = 103/114 (90.35%), Query Frame = 1 Query: 7 SFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
SFKQEH +KRK+EAERIRAKYPDRIPVICEKAD+SDIPDIDKKKYLVPADL+ GQFIYVIRKR+KLDP+KAIFIFVNDTIPQTSALMSQ+Y + DED FLY+ YS E TFG
Sbjct: 6 SFKQEHPF-EKRKAEAERIRAKYPDRIPVICEKADKSDIPDIDKKKYLVPADLTVGQFIYVIRKRVKLDPDKAIFIFVNDTIPQTSALMSQIYADKADEDMFLYVKYSSEGTFG 118
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match: A0A0P1A6U3_PLAHL (Autophagy-related protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6U3_PLAHL) HSP 1 Score: 189 bits (479), Expect = 2.880e-52 Identity = 92/116 (79.31%), Postives = 105/116 (90.52%), Query Frame = 1 Query: 1 MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
M SFK+EH +KR++EA+RIR+KYPDRIPVICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct: 28 MSSFKKEHPF-EKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 142
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match: M4BR17_HYAAE (Autophagy-related protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BR17_HYAAE) HSP 1 Score: 189 bits (479), Expect = 5.850e-52 Identity = 92/116 (79.31%), Postives = 105/116 (90.52%), Query Frame = 1 Query: 1 MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
M SFK+EH +KR++EA+RIR+KYPDRIPVICEKADRSDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T+ALMS +YE QKD DGFLYITYSGENTFG
Sbjct: 58 MSSFKKEHPF-EKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 172
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match: A0A7S2GCN7_9STRA (Autophagy-related protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCN7_9STRA) HSP 1 Score: 186 bits (472), Expect = 8.240e-52 Identity = 90/115 (78.26%), Postives = 104/115 (90.43%), Query Frame = 1 Query: 4 VSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
+SFK EH D+RKSEAERIR+KYPDRIPVICEKAD+SDIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PE+AIFIF+ + IPQ ++LMS +YE +KDEDGFLYITY+GENTFG
Sbjct: 1 MSFKSEHPI-DRRKSEAERIRSKYPDRIPVICEKADKSDIPDIDKKKYLVPADLTVGQFMYVIRKRIKLPPERAIFIFIRNVIPQQASLMSTIYEEEKDEDGFLYITYTGENTFG 114
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match: A0A024TY39_9STRA (Autophagy-related protein n=17 Tax=Oomycota TaxID=4762 RepID=A0A024TY39_9STRA) HSP 1 Score: 186 bits (473), Expect = 8.250e-52 Identity = 90/116 (77.59%), Postives = 105/116 (90.52%), Query Frame = 1 Query: 1 MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
M SFK+EH +KR++EA+RIR+KYPDRIPVICEKADRS+IPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIF+N+ +P T++LMS +YE QKD DGFLYITYSGENTFG
Sbjct: 1 MNSFKKEHPF-EKRQAEAQRIRSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTASLMSNIYEEQKDSDGFLYITYSGENTFG 115
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match: A0A7S3ZPI7_9STRA (Autophagy-related protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPI7_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.140e-51 Identity = 90/115 (78.26%), Postives = 105/115 (91.30%), Query Frame = 1 Query: 4 VSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
+SFK +H D+R+SE++RIRAKYPDR+PVICE+ADRSD+PDIDKKKYLVPADL+ GQFIYVIRKRIKL PEKAIFIFV++ IP T++LMS VYE QKDEDGFLY+TYSGENTFG
Sbjct: 1 MSFKADHPL-DRRRSESDRIRAKYPDRVPVICERADRSDVPDIDKKKYLVPADLTVGQFIYVIRKRIKLPPEKAIFIFVDNVIPPTASLMSAVYEVQKDEDGFLYVTYSGENTFG 114
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match: A0A5P9K6H3_9STRA (Autophagy-related protein n=2 Tax=Nannochloropsis TaxID=5748 RepID=A0A5P9K6H3_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.470e-51 Identity = 94/116 (81.03%), Postives = 102/116 (87.93%), Query Frame = 1 Query: 1 MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG 348
M SFK EH DKRK+EAE+I +KYPDRIPVICEKADRS+IPDIDKKKYLVPADLS GQF YVIRKRI+L PEKAIFIFVN+ IP TSA MS +YE +KDEDGFLYITYSGENTFG
Sbjct: 1 MSSFKAEHPL-DKRKAEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLSVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTSAAMSAIYEERKDEDGFLYITYSGENTFG 115
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Match: A0A8J5XTM3_DIALT (Autophagy-related protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XTM3_DIALT) HSP 1 Score: 186 bits (471), Expect = 1.520e-51 Identity = 92/119 (77.31%), Postives = 105/119 (88.24%), Query Frame = 1 Query: 7 SFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLVPADLSTGQFIYVIRKRIKLDPEKAIFIFVNDTIPQTSALMSQVYEHQKDEDGFLYITYSGENTFG*NERP 363
SFKQEH A +KRK+EAERIR KYPDRIPVICE+A+++DIPDIDKKKYLVPADL+ GQF+YVIRKRIKL PEKAIFIFV + +P T+A+MS VYE KDEDGFLYITYSGENTFG + P
Sbjct: 6 SFKQEH-AFEKRKAEAERIRLKYPDRIPVICERAEKTDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVGNVLPPTAAMMSSVYEANKDEDGFLYITYSGENTFGGDPDP 123 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.778.1 >prot_Ecto-sp6_S_contig101.778.1 ID=prot_Ecto-sp6_S_contig101.778.1|Name=mRNA_Ecto-sp6_S_contig101.778.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=117bp MVSFKQEHSAADKRKSEAERIRAKYPDRIPVICEKADRSDIPDIDKKKYLback to top mRNA from alignment at Ecto-sp6_S_contig101:61827..67078+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig101.778.1 ID=mRNA_Ecto-sp6_S_contig101.778.1|Name=mRNA_Ecto-sp6_S_contig101.778.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5252bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:61827..67078+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:61827..67078+ >mRNA_Ecto-sp6_S_contig101.778.1 ID=mRNA_Ecto-sp6_S_contig101.778.1|Name=mRNA_Ecto-sp6_S_contig101.778.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=351bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:61827..67078+ (Ectocarpus species6 EcLAC_371)back to top |