mRNA_Ecto-sp6_S_contig100.742.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp6_S_contig100.742.1
Unique Name	mRNA_Ecto-sp6_S_contig100.742.1
Type	mRNA
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)

Homology

[Close]

BLAST of mRNA_Ecto-sp6_S_contig100.742.1 vs. uniprot
Match: D7FRN0_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRN0_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 1.240e-116
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 3

Query:  201 MSGIAAARLKQERKDWRRDPDRPFGWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPAA 683
            MSGIAAARLKQERKDWRRDPDRPFGWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPAA
Sbjct:    1 MSGIAAARLKQERKDWRRDPDRPFGWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPAA 161

[Close]

BLAST of mRNA_Ecto-sp6_S_contig100.742.1 vs. uniprot
Match: A0A7S3NHG5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NHG5_9STRA)

HSP 1 Score: 242 bits (618), Expect = 2.540e-74
Identity = 108/159 (67.92%), Postives = 129/159 (81.13%), Query Frame = 3

Query:  201 MSGIAAARLKQERKDWRRDPDRPFGWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPP 677
            MSGIA  RL +ERK+WRRD   PFG+W R +  PDG++S+++W+CG+PG K T+WE G YR+ MEFTEDYPSKPPKCKF PPLFHPNVYPSGTICLSILNE Q WRP+ITIKQML GI +LLD PNP  PAQ  AY+LF+N+K  Y +R+  EA+KNPP
Sbjct:    1 MSGIARGRLAEERKNWRRD--HPFGFWARPALKPDGTTSLLQWDCGIPGKKGTDWENGVYRVRMEFTEDYPSKPPKCKFTPPLFHPNVYPSGTICLSILNEDQDWRPAITIKQMLLGIQDLLDTPNPRSPAQDAAYKLFINDKNAYSQRIRQEARKNPP 157

[Close]

BLAST of mRNA_Ecto-sp6_S_contig100.742.1 vs. uniprot
Match: A0A835YNI1_9STRA (Ubiquitin conjugating enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI1_9STRA)

HSP 1 Score: 241 bits (616), Expect = 5.210e-74
Identity = 108/157 (68.79%), Postives = 133/157 (84.71%), Query Frame = 3

Query:  207 GIAAARLKQERKDWRRDPDRPFGWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPP 677
            GIA ARL +ERK WR+D   P G++ R  +NPD S ++MKW+CG+PG  +++W GG Y++ MEFT++YPSKPPKCKFVPPLFHPNVYPSGT+CLSILNE  GWRP+ITIKQML GI +LLDNPNP+ PAQSEAYQ+FVNN+AEY+RRV +EA+KN P
Sbjct:    4 GIARARLAEERKAWRKD--HPIGFYARPVSNPDNSMNLMKWDCGIPGVASSDWAGGVYKLSMEFTDEYPSKPPKCKFVPPLFHPNVYPSGTVCLSILNEDDGWRPAITIKQMLLGIQDLLDNPNPNSPAQSEAYQMFVNNRAEYNRRVRLEARKNIP 158

[Close]

BLAST of mRNA_Ecto-sp6_S_contig100.742.1 vs. uniprot
Match: A0A6U0IJL9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IJL9_9STRA)

HSP 1 Score: 239 bits (610), Expect = 3.940e-73
Identity = 109/158 (68.99%), Postives = 132/158 (83.54%), Query Frame = 3

Query:  207 GIAAARLKQERKDWRRDPDRPFGWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPA 680
            GIA  RL +ERK+WRRD   PFG++ R  +  DGSS++MKW  G+PG +NT+W GG Y++ +EF+E+YPSKPPKCKFVPPLFHPNVYPSGTICLSILNE +GWRP+ITIKQML GI +LLD+PNP+ PAQSEAYQLF+NNK EY RRV  EA+KN P+
Sbjct:    4 GIARGRLAEERKNWRRD--HPFGFYARPESKGDGSSNLMKWATGIPGKENTDWSGGVYKVTLEFSEEYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITIKQMLLGIQDLLDDPNPNSPAQSEAYQLFMNNKPEYKRRVKAEARKNAPS 159

[Close]

BLAST of mRNA_Ecto-sp6_S_contig100.742.1 vs. uniprot
Match: A0A448ZL65_9STRA (UBC core domain-containing protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A448ZL65_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.030e-72
Identity = 109/158 (68.99%), Postives = 131/158 (82.91%), Query Frame = 3

Query:  204 SGIAAARLKQERKDWRRDPDRPFGWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPP 677
            SGIA  RL +ERK WRRD   PFG++ R ++  DGSS IMKWE G+PG + T+WE G +++ MEF+EDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNE +GWRP+IT+KQ+L GI +LLD+PNP+ PAQSEAYQLF++NK EY RRV  EA+KN P
Sbjct:    3 SGIARGRLVEERKAWRRD--HPFGFYARPTSKGDGSSDIMKWEAGIPGKEGTDWENGVFKVSMEFSEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITLKQVLIGIQDLLDDPNPNSPAQSEAYQLFIHNKTEYKRRVQAEARKNTP 158

[Close]

BLAST of mRNA_Ecto-sp6_S_contig100.742.1 vs. uniprot
Match: D7G3Z7_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Z7_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 1.500e-72
Identity = 110/160 (68.75%), Postives = 129/160 (80.62%), Query Frame = 3

Query:  201 MSGIAAARLKQERKDWRRDPDRPFGWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPA 680
            MSGIA ARL++ERK WRRD   P G+  +     D S+ +++WECGLPGP +T+W GG Y + MEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSIL+E +GWRP+ITIKQML GI +L D PNP+ PAQSEAYQLFV NK EY RRV +EA+KN P+
Sbjct:    1 MSGIAEARLREERKAWRRD--HPVGFHAKPMLKDDSSTDLLRWECGLPGPADTDWAGGLYTVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLLGIHDLFDTPNPNSPAQSEAYQLFVTNKEEYKRRVRLEAQKNIPS 158

[Close]

BLAST of mRNA_Ecto-sp6_S_contig100.742.1 vs. uniprot
Match: A0A7S4AH06_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AH06_9STRA)

HSP 1 Score: 236 bits (601), Expect = 8.030e-72
Identity = 108/158 (68.35%), Postives = 131/158 (82.91%), Query Frame = 3

Query:  204 SGIAAARLKQERKDWRRDPDRPFGWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPP 677
            SGIA  RL +ERK WRRD   PF ++ R ++  DGSS IMKWE G+PG + T+WE G +++ MEF+EDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNE +GWRP+IT+KQ+L GI +LL++PNP+ PAQSEAYQLF++NKAEY RRV  EA+KN P
Sbjct:    3 SGIARGRLAEERKAWRRD--HPFAFYARPTSKGDGSSDIMKWEAGIPGKEGTDWENGVFKVSMEFSEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITLKQVLIGIQDLLNDPNPNSPAQSEAYQLFIHNKAEYKRRVQAEARKNTP 158

[Close]

BLAST of mRNA_Ecto-sp6_S_contig100.742.1 vs. uniprot
Match: B8BY49_THAPS (Ubiquitin conjugating enzyme n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8BY49_THAPS)

HSP 1 Score: 236 bits (601), Expect = 8.870e-72
Identity = 107/159 (67.30%), Postives = 130/159 (81.76%), Query Frame = 3

Query:  204 SGIAAARLKQERKDWRRDPDRPFGWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPA 680
            SGIA  RL +ERK WRRD   P+G++ R  +  DGSS +MKWE G+PG + T+WE G Y++ +EF+++YPSKPPKCKFVPPLFHPNVYPSGTICLSILNE +GWRP+IT+KQML GI +LLD PNP+ PAQSEAY LF+NNKAEY RRV  EA+KN P+
Sbjct:    4 SGIARGRLAEERKAWRRD--HPYGFYARPVSRGDGSSDLMKWETGIPGKEGTDWESGVYKVMLEFSDEYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITVKQMLLGIQDLLDTPNPNSPAQSEAYNLFINNKAEYKRRVKAEARKNTPS 160

[Close]

BLAST of mRNA_Ecto-sp6_S_contig100.742.1 vs. uniprot
Match: A0A7S2Y0C7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0C7_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.690e-71
Identity = 105/162 (64.81%), Postives = 134/162 (82.72%), Query Frame = 3

Query:  192 RQPMSGIAAARLKQERKDWRRDPDRPFGWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPP 677
            R    GIA  RL +ERK WR+D   P+G++ R   + D S+++MKWECG+PGP+ T+WEGG Y++ MEF+E+YPSKPPKCKFVPPLFHPNVYPSGT+CLSILNE + WRP+ITIKQML GI +LLDNPNP+ PAQS+AYQL++ ++AEY+RRV +EA+KN P
Sbjct:    8 RMSAGGIARGRLIEERKAWRKD--HPYGFYARPMMSDDNSTNLMKWECGMPGPEGTDWEGGMYKLTMEFSEEYPSKPPKCKFVPPLFHPNVYPSGTVCLSILNEEEDWRPAITIKQMLLGIQDLLDNPNPNSPAQSDAYQLYITDRAEYNRRVRMEARKNIP 167

[Close]

BLAST of mRNA_Ecto-sp6_S_contig100.742.1 vs. uniprot
Match: A0A7S1FY89_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY89_9STRA)

HSP 1 Score: 234 bits (597), Expect = 4.120e-71
Identity = 106/159 (66.67%), Postives = 131/159 (82.39%), Query Frame = 3

Query:  207 GIAAARLKQERKDWRRDPDRPFGWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPAA 683
            GIA  RL +ERK WR+D   PFG++ R  A+ DGSS++MKWE G+PG   ++WEGG Y++ MEF+E+YPSKPPKCKF PPLFHPNVYPSGTICLSILNE +GWRP+IT+KQM+ GI +LLD+PNP+ PAQSEAY L++ NKAEY RRV +EAK+N P A
Sbjct:   10 GIARGRLSEERKAWRKD--HPFGFYARPVASGDGSSNMMKWEVGIPGKAGSDWEGGLYKVSMEFSEEYPSKPPKCKFTPPLFHPNVYPSGTICLSILNEEEGWRPAITLKQMVLGIQDLLDDPNPNSPAQSEAYNLYMRNKAEYSRRVRVEAKRNAPPA 166

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig100.742.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig100.742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7FRN0_ECTSI	1.240e-116	100.00	UBC core domain-containing protein n=2 Tax=Ectocar...	[more]
A0A7S3NHG5_9STRA	2.540e-74	67.92	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A835YNI1_9STRA	5.210e-74	68.79	Ubiquitin conjugating enzyme n=1 Tax=Tribonema min...	[more]
A0A6U0IJL9_9STRA	3.940e-73	68.99	Hypothetical protein n=1 Tax=Minutocellus polymorp...	[more]
A0A448ZL65_9STRA	1.030e-72	68.99	UBC core domain-containing protein n=2 Tax=Bacilla...	[more]
D7G3Z7_ECTSI	1.500e-72	68.75	UBC core domain-containing protein n=2 Tax=Ectocar...	[more]
A0A7S4AH06_9STRA	8.030e-72	68.35	Hypothetical protein n=1 Tax=Pseudo-nitzschia aust...	[more]
B8BY49_THAPS	8.870e-72	67.30	Ubiquitin conjugating enzyme n=2 Tax=Thalassiosira...	[more]
A0A7S2Y0C7_9STRA	1.690e-71	64.81	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S1FY89_9STRA	4.120e-71	66.67	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	352.8
Seed ortholog evalue	8.4e-95
Seed eggNOG ortholog	2880.D7FRN0
Preferred name	hus5
Model size	1679
KEGG ko	ko:K10577
KEGG Pathway	ko03013,ko04064,ko04120,ko05206,map03013,map04064,map04120,map05206
KEGG Module	M00427
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000022,GO:0000070,GO:0000122,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000785,GO:0000790,GO:0000792,GO:0000793,GO:0000794,GO:0000795,GO:0000819,GO:0001101,GO:0002178,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005720,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006066,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006629,GO:0006643,GO:0006644,GO:0006665,GO:0006667,GO:0006670,GO:0006672,GO:0006684,GO:0006686,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0008610,GO:0008641,GO:0008654,GO:0009056,GO:0009057,GO:0009058,GO:0009719,GO:0009725,GO:0009737,GO:0009790,GO:0009791,GO:0009793,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010154,GO:0010468,GO:0010506,GO:0010508,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010629,GO:0012505,GO:0016020,GO:0016043,GO:0016239,GO:0016241,GO:0016604,GO:0016605,GO:0016740,GO:0016874,GO:0016877,GO:0016925,GO:0017059,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019637,GO:0019751,GO:0019787,GO:0019789,GO:0019899,GO:0019904,GO:0019941,GO:0019948,GO:0022402,GO:0022414,GO:0030148,GO:0030163,GO:0031211,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031399,GO:0031401,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033233,GO:0033235,GO:0033993,GO:0034311,GO:0034312,GO:0034641,GO:0035339,GO:0036211,GO:0042175,GO:0042221,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043603,GO:0043604,GO:0043632,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044388,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045892,GO:0045934,GO:0046165,GO:0046173,GO:0046467,GO:0046511,GO:0046512,GO:0046513,GO:0046519,GO:0046520,GO:0048285,GO:0048316,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051231,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051276,GO:0051338,GO:0051347,GO:0051603,GO:0060255,GO:0061458,GO:0061650,GO:0061656,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0071535,GO:0071704,GO:0071840,GO:0080090,GO:0090407,GO:0097164,GO:0097305,GO:0098796,GO:0098813,GO:0098827,GO:0099086,GO:0140014,GO:0140096,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1901700,GO:1902494,GO:1902679,GO:1902850,GO:1903047,GO:1903182,GO:1903320,GO:1903322,GO:1903506,GO:1903507,GO:1903755,GO:1904502,GO:1904504,GO:1905961,GO:1990234,GO:1990356,GO:2000112,GO:2000113,GO:2001141
Exons	6
EggNOG free text desc.	protein modification by small protein conjugation
EggNOG OGs	COG5078@1,KOG0424@2759
Ec32 ortholog description	Ubiquitin-conjugating enzyme/RWD-like
Ec32 ortholog	Ec-12_002440.1
Cds size	486
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko03019,ko04121

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig100.742.1	prot_Ecto-sp6_S_contig100.742.1	Ectocarpus species6 EcLAC_371	polypeptide	Ecto-sp6_S_contig100 445188..449142 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682348725.2809057-UTR-Ecto-sp6_S_contig100:444194..445187	1682348725.2809057-UTR-Ecto-sp6_S_contig100:444194..445187	Ectocarpus species6 EcLAC_371	UTR	Ecto-sp6_S_contig100 444195..445187 -
1682348725.3476117-UTR-Ecto-sp6_S_contig100:449142..449342	1682348725.3476117-UTR-Ecto-sp6_S_contig100:449142..449342	Ectocarpus species6 EcLAC_371	UTR	Ecto-sp6_S_contig100 449143..449342 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682348725.2914422-CDS-Ecto-sp6_S_contig100:445187..445254	1682348725.2914422-CDS-Ecto-sp6_S_contig100:445187..445254	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig100 445188..445254 -
1682348725.300198-CDS-Ecto-sp6_S_contig100:446070..446199	1682348725.300198-CDS-Ecto-sp6_S_contig100:446070..446199	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig100 446071..446199 -
1682348725.3085282-CDS-Ecto-sp6_S_contig100:447009..447080	1682348725.3085282-CDS-Ecto-sp6_S_contig100:447009..447080	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig100 447010..447080 -
1682348725.3173306-CDS-Ecto-sp6_S_contig100:447341..447410	1682348725.3173306-CDS-Ecto-sp6_S_contig100:447341..447410	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig100 447342..447410 -
1682348725.3267963-CDS-Ecto-sp6_S_contig100:447993..448071	1682348725.3267963-CDS-Ecto-sp6_S_contig100:447993..448071	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig100 447994..448071 -
1682348725.337936-CDS-Ecto-sp6_S_contig100:449070..449142	1682348725.337936-CDS-Ecto-sp6_S_contig100:449070..449142	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig100 449071..449142 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp6_S_contig100:444195..449342-
coding sequence from alignment at Ecto-sp6_S_contig100:444195..449342-

protein sequence of mRNA_Ecto-sp6_S_contig100.742.1

>prot_Ecto-sp6_S_contig100.742.1 ID=prot_Ecto-sp6_S_contig100.742.1|Name=mRNA_Ecto-sp6_S_contig100.742.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=162bp
MSGIAAARLKQERKDWRRDPDRPFGWWTRLSANPDGSSSIMKWECGLPGP
KNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILN
EGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRV
LIEAKKNPPAA*

mRNA from alignment at Ecto-sp6_S_contig100:444195..449342-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp6_S_contig100.742.1 ID=mRNA_Ecto-sp6_S_contig100.742.1|Name=mRNA_Ecto-sp6_S_contig100.742.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5148bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:444195..449342- (Ectocarpus species6 EcLAC_371)
GTGATCTCTGCCAACACCCAAGGGCCGGCGAATAGGACGAATCAGTGGCT
TAGGAAATCGGTGATTCCCGTAGCCATATTAGCTCCGCGGTCACCAACGA
GCTTGAGAGTTTTTTAAAAAATCAACAGTTTGAAGGCAACTGCATCAAAA
GTTTGAGGCAACTGCTTGTTGAATATCGTCATCACCAACAACGGCAACCG
ATGAGCGGAATCGCAGCAGCCCGACTGAAGCAGGAGAGAAAAGACTGGAG
GAGGGATCCAGACAGGCCGTTCGTGAGTGGAGTTGGGGATTGGAAAAGCG
TCTGTTGCTTTGCTATGGAGAGCTATGTAACGTCGCGTTGCAGACCACCA
TCGTCCATGACAGAAGATATCATCCCCCCCGCTCCCCCTGCTGGCCCGAT
TTTTGAAGGCTCGATTACATACCCCACGGCCGAATGAATGGCGGCGCCGA
CAATCGCGGCGTCAGTACTGTCTCGTCGAGGGTATTCTAATATTGTAGTG
TGGTGTGTACATTGTCTCCCGCCCGTGGGGAGAACACGAGTTTTGAAAAT
CGGTCCAAGGGGGTGTGCTATCTCACGTCATCTATACGGCAGTTCATGCA
TGCGTGTATAGACCATTCCCCGGAAAGCTCCTCACGCGCCAGCTTTACCA
GCTCGTAATATGTTCATGTTGGCGAGTTGCCTTAGCCTCTACAATTCCGT
TGCTGTAGGCAATCGCGGGGTGGATGGCTCTCGATCTATCCTCTTGGTCA
CGAACCAAACTTTCTAGAACTTATAGAAGTTTTTCCCCTAGATAGCATAA
AACTATGGGGGAGATGTGGTGATATCAGTTTATATTTATACCCATCCGGT
GTTTTTGTGGTCAACACCTACCTGCTGGCGTCACTGATAAAGTATGCACA
TCGTAGGAGGCGTCGGGGGCGATCTTTAGAGCCCGTTGCCAGCTGCTACC
AGCGAAAGCGAGGAAAGCAAGTGCACACCCATCCTGCACGGCAGCAGCAA
CAGCAGCAGCTACATGTAGCTGATGATTATGAGAGATAAACAGCGCTCTC
AGTCATCCCCTAGCTGACTGGTCATGTCGGGTGAGGTGTGAGCGTGTGCG
CTGGTGACCTTTATGGTGGCGTAGGCTCCATCCATATCTATCTACGCTTG
CTTTGATGTCTCTCTCCGGACCTTCTTTTCGCGCTCTTTTTTTGTTGGAC
CCCTATGTACGGGAGGTGAGATAACAATCGCTGTTTACACGTCGCTAATT
GTGTGCACACGGTTCTGACAGGGCTGGTGGACGAGGCTTTCGGCCAATCC
TGATGGATCGTCGTCGATCATGAAGTGGGAGTGCGGCCTTCCAGGACCGG
TGAGCAGAACGGTTACAACTGCGGTACCAATTTTATCGTAGACAAGGCAG
CAGTTAGTGTTTCATGTATTTTCCTTTCAACATGCATCCCCCCGTACTTG
TATCCAAGAACCTTCTGCGGCAGGCGAATCTTTGTGGTGCGATGTTTCCT
CTTCGGCGTTTGAAATCTCGCACGACTGTTTTCAACAGCCACTACTCAAG
AATCCAGAGCTGTTTGGCGTATTCCCTTCATTCTTCTACCGCTTGACGTC
GGCTACGTCTGTCTTCGTGGCTCCTTGGTCGTGTCCCACAGAACACGAGC
GCCGCGGGAACAGCAGCTGTACAGCTTTTCTACGGCGTCGGTAGCAATGG
TCGTGCCCTTTGGTGTCTTTTCGGGCACCAGGCAAACAACACTGTCGGCT
GTTTTTCTCTCTCCGGGTGAATCGGCAAGTGCTGCCTCCAAGTTTGACCT
GAACGTCGTGCGCTTCTGCTCCCGAGTGTGATACCGTGCACGCCACTTAA
AACGACATCCCTCTCGTCTGATACCTTGCTACACTCCTGTATGCTGCACG
GCGCCGGCATGACCCCCCTCGCGGTTTCGCAGAAGAATACCAACTGGGAG
GGCGGAGAGTACCGGATCCACATGGAGTTCACCGAAGACTACCCCTCGAA
GGTACGTGTTTGTACTTGAAACGTTTGGAGCGCGTTGGCCCTCAAAAGGT
AGAGGTTTATACCATAGGTATTTGTCAATGTCCGACTCCATGCTCACAGA
GAAAGGGCAGACTGAGTCTGTGTTGTGGTTAGTTAGTTCGCGCCGGTTGT
AAGTGTTTGCGATCCCGTGCGTGAATTGCTGTCGTGCTGTGATATGCTCA
CCCGACCGAGCTGTTTTTTGCCTGGCTGGTGCGCTCGTGCCCTTCTCGCC
GCTCCCCCTCAGCCGCCCAAGTGCAAGTTCGTGCCACCCCTGTTCCACCC
CAACGTCTACCCGTCAGGCACCATCTGCCTCAGGTAAGTACGATCCCGGG
GTGGCGAGTAGATTTCGCCGTCGTGACTGTCGCCACGAAACATGTAGGGG
AAATTCTCGAGTTTGCGCCAGGAACCTCTTGTTTTATTTTCTCTGCCTGC
CTTCCGTGTCTCGTTGCGCTCTACATGGGAAGCGTCTGGTAGTCGAGCGT
TTTGAAGTATATCGCAGTTCTCTGCGCGTTGTCAATACATCAATTTTTCG
GCTCAAGTGCCGAACGCTGCAGGCATCACATGCAGCAAGTGCAGCAGTAG
CGCGGGGTTGCCTCTTCCTTGCCGCGAGCGTCCTGCCCGGGAGCTCGTAC
CCTACGTACATATTCAAGTGTTCTTCCACGTATTTTTCGAGGTGCCACCA
CTCGTGAGAAAAAAAAGGTGTGCGCGTATGTGCACGCTCCTCGCGGCGTT
GCAGGTAGCCCGCAAAATCCCGTCCACGCTCGCTTCGTTGGCGCCGTCCT
CCCTTTCCGGGTCGGGTATCAAAAACCCAGCTAGCATTGGCGCGTCCTAC
TGCCGCGTTGTGTAATCGAAAAGGTTGCGTACGCCCCTTCCTGCGCCAAG
CGCACATTGCTCTCTGGCGCTTGTGTGGCTGCTACTTTCTGAGGCACTTC
GTGTTTTGACGATAATTTCCACTGTCAAAAAGGAAGGCAAGGCATGCTGA
TTACACTGCCCCGGTCCATCCCGTAGCTTTTCCACCACGCACGGGACCTA
CCGTCTCTTCAGGGCAGCATCGTGTAGACTTTTATCTTCCGCCGTGAACC
GCAGCGTTGCCACTTTCCCTCCCAATGGCTTTGTTGGTGGCAGCATCCTG
AACGAGGGCCAGGGATGGAGACCAAGCATCACCATCAAGCAGATGCTCCA
TGGGATCTTCGAACTTTTGGACAATCCGAACCCCGACGACCCTGCCCAAT
CAGAGGCCTACCAACTGTTTGTGTGAGTGGCGCTGATGGCCTACACTGCC
GCTATATGCGAGTAGTCGGTGCTGTTGCTATTATAGTATTTGTGGAGTGC
TGATGGTTGTGCGTCGCCGGTTTGAGTGGCCTTCTGTCCGCGTGCGCGGC
TTGTGCGGCTGCGTCTCCTGCTCTGCGTGGTTGTAGTGGCTGCGGCTCCT
GCTCTGCGTGGTTGTAGTGGCTGCGGCTCCTGCTCTGCGTGGTTGTAGTG
GCTGCGGCTCCTGCTCTGCGTGGTTGTAGTGGCTGCGGCTCCTGCTCTGC
GTGGTTGTAGTGGCTGCGGCTCCTGGTGGTTGTAGTGGCTGCGGGTCCTG
CTCTGCGTTGTAGTGGCTGTTTCTTGTGTGCTTTCAACCGTAAGAGGCGA
CAATGAAGGCGCGTACCGGCAGAATGCCACGCGAGCATCCGTGAATAATC
GCTGGTAGAGCATTTTGCCGGCGTGTTGGATGCGTTGAGTCGATTTCCGT
GTTGAGCAAGAGGCATTCGATATCGAGAGTTACTGTTATTGATCGCGTCG
TCGCCAGCTCCCCATCTATTTATCTCTTTGACCAGCGGTGTAACGATTTC
GTCACCAGACAAATCGTTAGATACACGTAGTAACAGACATTTTTTTCCAA
TCTATTCTGGCGTCAGTCTCCACCTTGCAGTATATGAAGCACAGCGGTCA
AGCCATTGACTATCAGTCTCGGGCAGCATGTCCAAGATGCAAACGAATGT
GAACCCATTGTGATCGACCGAACCGATGTGTACCTGCCGCGGTGCGGCGT
GATGTCTCCCCAAACGCTACACAACGCAACACCTACAGGAACAACAAAGC
GGAGTACGACAGGAGGGTGCTCATCGAGGCCAAGAAGAATCCCCCCGCTG
CATAGCACCGCCGCCTGCATATCTATCCATGCACAAGCTGTGGGCACCCT
CATCCTCAAAGTGCCCCTTACGGTTCCCACTGCCTCGTGTGGGGAGCGCG
ATTGAGATGACGGCGCTTGCACGAGACACAACATCGAGCAAAACAAGAGC
TCACAGCACAGTGTACATGCTCGGACAAACGTTGGCGGTACAACGTGTCC
GGTCCAGAAGCAGGTTTAGGCAGCCGATTGGCATGCCCCCACGCTTGACT
AGGTGGTACATACGCAAGTAGTGTGTTCTGTCGTGCGTCGTCTCACCCTC
CTCTCGAGGTTACTGGTGAGGCCGAGTTGCGGTGAGCTCGACACACATGC
AGCCAATTTGTGCCGATCGAATGTAGAGTAAATGGCAGTCGTGGTGCTAA
GCACCGTGTTGCGGGTTCCGGGGCCGTGGTGTATAGTTCATCTTTTCGTT
TGGGCGTTTCAATGTGCTGTCCGAGTGCGTGCCGGCATCCAACGGCAACG
TTAATGTTGGGCGCGTGCATGGTGGCCGTCGGACTGAAGCTGCTCGAACA
TGTTAGCCTTGTGCCCTCGTCTAGTTGTAATTCCATGAACGTGCTCGCCA
TTTCTTGTTGGATCCACTTCCTTCGATTGGACATGGATTCGTCGGTGAGC
ATTTTTTTTTTTTCCCCAGATTTAGGCAAGCTTAGCATCAGGCAGAGCAG
ACGAGGCTCAGAACAAGACCTCGGACGATCCCGGGGCGACGGGTAGACAG
GGAAACCTCAGAACAACGTACAACAGCCTTCTTGTGTGTAGATATGCGTT
TAGAGTTGCTGCCAGGATTTCCGGGCGGATCGCATGCCGTGTCAACATGG
AAAAGAGGGTTTCTAATCGTGCATAGCAGCCAGTATTTTCGTTTCGGGGC
GTTAAGAGGTTTCGCCCGATAGATTGGGTATGCTGCTGTCTACGCGTATG
CGCGGGATTGCCCTACACAAAAAAAAAATTACGTGACTGCTCCGCTGG

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:444195..449342-

>mRNA_Ecto-sp6_S_contig100.742.1 ID=mRNA_Ecto-sp6_S_contig100.742.1|Name=mRNA_Ecto-sp6_S_contig100.742.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=486bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:444195..449342- (Ectocarpus species6 EcLAC_371)
ATGAGCGGAATCGCAGCAGCCCGACTGAAGCAGGAGAGAAAAGACTGGAG
GAGGGATCCAGACAGGCCGTTCGGCTGGTGGACGAGGCTTTCGGCCAATC
CTGATGGATCGTCGTCGATCATGAAGTGGGAGTGCGGCCTTCCAGGACCG
AAGAATACCAACTGGGAGGGCGGAGAGTACCGGATCCACATGGAGTTCAC
CGAAGACTACCCCTCGAAGCCGCCCAAGTGCAAGTTCGTGCCACCCCTGT
TCCACCCCAACGTCTACCCGTCAGGCACCATCTGCCTCAGCATCCTGAAC
GAGGGCCAGGGATGGAGACCAAGCATCACCATCAAGCAGATGCTCCATGG
GATCTTCGAACTTTTGGACAATCCGAACCCCGACGACCCTGCCCAATCAG
AGGCCTACCAACTGTTTGTGAACAACAAAGCGGAGTACGACAGGAGGGTG
CTCATCGAGGCCAAGAAGAATCCCCCCGCTGCATAG