mRNA_Ecto-sp6_S_contig100.730.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.730.1 vs. uniprot
Match: A0A835YJC7_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJC7_9STRA) HSP 1 Score: 540 bits (1392), Expect = 5.940e-186 Identity = 260/342 (76.02%), Postives = 294/342 (85.96%), Query Frame = 2 Query: 65 TENEFASKLHAAQARPFLRVLVTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNMACPASPVHYQYNPIKTTKVSFFGAMNMLGLAKRVNARILQASTSEVYGDAQESPQTESYWGNVNCHGVRACYDEGKRVAETLFFDFHRQHKIEVRVARIFNTFGPGMHPYDGRVVSNFIMQALSGEDITIYGDGGQTRSFCFVDDLIEGLVRLMNNDTEIGPMNIGNPTEFTIKQLAEMTVRLTKSPSKIIYKPLPQDDPKQRRPDISFAKSALDWEPNVALEEGLAKTIEYFSKLDMRNFKKPTTHDAHKNSE 1090
T NEFA L +AQ PFLRVLVTGGAGFLGSHLCRRLL GH+VICLDNFFTSQKLNI DL D PNFEFVRHD+T PF AEVD+I+N+ACPASPVHYQYNPIKT K+SF GA+NMLGLAKRV ARILQASTSEVYGDAQ++PQTE YWGNVN GVRACYDEGKRVAETLF D+HRQH +++RVARIFNT+GP MHPYDGRVVSNFIMQAL+ +DITIYG G QTRSFCFVDDL++GL+RLM++D I P+N+GNP EFTI +LA++ ++L S S+II KPLPQDDPKQR+PDI+ A ALDW+P LEEGL TIEYF LDMR FKKPT H+AH NSE
Sbjct: 22 TANEFALALRSAQLNPFLRVLVTGGAGFLGSHLCRRLLAAGHEVICLDNFFTSQKLNIVDLMDHPNFEFVRHDVTVPFFAEVDRIFNLACPASPVHYQYNPIKTAKISFCGALNMLGLAKRVRARILQASTSEVYGDAQQTPQTEQYWGNVNPIGVRACYDEGKRVAETLFLDYHRQHSVQIRVARIFNTYGPSMHPYDGRVVSNFIMQALANDDITIYGSGTQTRSFCFVDDLVDGLLRLMDSDM-ITPVNLGNPNEFTILELAQLIIKLAGSKSRIINKPLPQDDPKQRKPDITVAMRALDWQPRTQLEEGLRATIEYFRHLDMRKFKKPTEHNAHANSE 362
BLAST of mRNA_Ecto-sp6_S_contig100.730.1 vs. uniprot
Match: A0A7R9YP38_DIALT (UDP-glucuronate decarboxylase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YP38_DIALT) HSP 1 Score: 524 bits (1349), Expect = 6.970e-180 Identity = 245/339 (72.27%), Postives = 287/339 (84.66%), Query Frame = 2 Query: 95 AAQARPFLRVLVTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNMACPASPVHYQYNPIKTTKVSFFGAMNMLGLAKRVNARILQASTSEVYGDAQESPQTESYWGNVNCHGVRACYDEGKRVAETLFFDFHRQHKIEVRVARIFNTFGPGMHPYDGRVVSNFIMQALSGEDITIYGDGGQTRSFCFVDDLIEGLVRLMNNDTEIGPMNIGNPTEFTIKQLAEMTVRLTKSPSKIIYKPLPQDDPKQRRPDISFAKSALDWEPNVALEEGLAKTIEYFSKLDMRNFKKPTTHDAHKNSEAEEKRAR 1111
+++ + F R+LVTGGAGFLGSHLCRRL+ EGH V+C+DNFFTSQK N+ DL D+PNFE VRHD+T PF E DQIYNMACPASPVHYQ+NP+KT K S G MNMLGLAKRV ARILQASTSEVYGD +PQ ESYWG+VNC GVR+CYDEGKR AETL FD+HRQ++++VRV RIFNT+GPGMHPYDGRVVSNFI+QAL+G+DITIYGDG QTRSFCFVDDL++G+VR MN D IGP+N+GNP EFTIKQLAE T++LT S SK+I +PLP DDPKQRRPDI+ A+ L WEP V L+EGL KTI+YF+ +DMR FKKPT HDAH NS +EK A+
Sbjct: 17 SSETKEFKRILVTGGAGFLGSHLCRRLVREGHDVVCMDNFFTSQKTNVTDLLDKPNFELVRHDVTMPFFIECDQIYNMACPASPVHYQFNPVKTMKTSVLGMMNMLGLAKRVRARILQASTSEVYGDPNITPQPESYWGHVNCTGVRSCYDEGKRCAETLCFDYHRQNQVDVRVIRIFNTYGPGMHPYDGRVVSNFIVQALNGQDITIYGDGSQTRSFCFVDDLVDGIVRFMNQDECIGPVNLGNPHEFTIKQLAERTIQLTGSKSKLINEPLPHDDPKQRRPDITLARELLKWEPKVQLDEGLQKTIDYFAHVDMRTFKKPTQHDAHTNSRVDEKDAK 355
BLAST of mRNA_Ecto-sp6_S_contig100.730.1 vs. uniprot
Match: D7G8T6_ECTSI (UDP-glucuronate decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T6_ECTSI) HSP 1 Score: 519 bits (1336), Expect = 2.810e-179 Identity = 261/271 (96.31%), Postives = 263/271 (97.05%), Query Frame = 2 Query: 344 PVHYQYNPIKTTKVSFFGAMNMLGLAKRVNARILQASTSEVYGDAQESPQTESYWGNVNCHGVRACYDEGKRVAETLFFDFHRQHKIEVRVARIFNTFGPGMHPYDGRVVSNFIMQALSGEDITIYGDGGQTRSFCFVDDLIEGLVRLMNNDTEIGPMNIGNPTEFTIKQLAEMTVRLTKSPSKIIYKPLPQDDPKQRRPDISFAKSALDWEPNVALEEGLAKTIEYFSKLDMRNFKKPTTHDAHKNSEAEEKRARNASPVRSNGISAATK 1156
PVH+ KVSFFGAMNMLGLAKRVNARILQASTSEVYGDAQESPQTESYWGNVNCHGVRACYDEGKRVAETLFFDFHRQHKIEVRVARIFNTFGPGMHPYDGRVVSNFIMQALSGEDITIYGDGGQTRSFCFVDDLIEGLVRLMNNDTEIGPMNIGNPTEFTIKQLAEMTVRLTKSPSKIIYKPLPQDDPKQRRPDISFAKSALDWEPNVALEEGLAKTIEYFSKLDMRNFKKPTTHDAHKNSEAEEKRA+NASPVRSNGISAATK
Sbjct: 9 PVHHGL----AVKVSFFGAMNMLGLAKRVNARILQASTSEVYGDAQESPQTESYWGNVNCHGVRACYDEGKRVAETLFFDFHRQHKIEVRVARIFNTFGPGMHPYDGRVVSNFIMQALSGEDITIYGDGGQTRSFCFVDDLIEGLVRLMNNDTEIGPMNIGNPTEFTIKQLAEMTVRLTKSPSKIIYKPLPQDDPKQRRPDISFAKSALDWEPNVALEEGLAKTIEYFSKLDMRNFKKPTTHDAHKNSEAEEKRAKNASPVRSNGISAATK 275
BLAST of mRNA_Ecto-sp6_S_contig100.730.1 vs. uniprot
Match: A0A2R5FZD8_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZD8_9STRA) HSP 1 Score: 521 bits (1343), Expect = 3.280e-179 Identity = 248/327 (75.84%), Postives = 278/327 (85.02%), Query Frame = 2 Query: 113 FLRVLVTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNMACPASPVHYQYNPIKTTKVSFFGAMNMLGLAKRVNARILQASTSEVYGDAQESPQTESYWGNVNCHGVRACYDEGKRVAETLFFDFHRQHKIEVRVARIFNTFGPGMHPYDGRVVSNFIMQALSGEDITIYGDGGQTRSFCFVDDLIEGLVRLMNNDTEIGPMNIGNPTEFTIKQLAEMTVRLTKSPSKIIYKPLPQDDPKQRRPDISFAKSAL-DWEPNVALEEGLAKTIEYFSKLDMRNFKKPTTHDAHKNSE 1090
F RVLVTGGAGFLGSHLCRRL+ EGH+VICLDNFFTSQ++NI DL D+PNFE VRHD+TEPF AEVDQIYN+ACPASPVHYQYNPIKT K SF G+MN+LGLAKR +RILQASTSEVYGD SPQ E YWG+VN +GVR+CYDEGKR AETLFFD++RQ+ +++RV RIFNTFGPGMHPYDGRVVSNFIMQAL G DITIYGDG QTRSFCFVDDLIEG+VR MN + +GP+N+GNP EFTIK+LAE+ V LT S SKIIY PLP DDPKQRRPDI+ AK L +WEP V L +GL KTIEYF LDMR +K PT H AH NSE
Sbjct: 12 FQRVLVTGGAGFLGSHLCRRLVAEGHEVICLDNFFTSQRINIADLLDKPNFELVRHDVTEPFHAEVDQIYNLACPASPVHYQYNPIKTMKTSFMGSMNLLGLAKRTKSRILQASTSEVYGDPNVSPQPEEYWGHVNPNGVRSCYDEGKRAAETLFFDYYRQNNVDIRVLRIFNTFGPGMHPYDGRVVSNFIMQALQGRDITIYGDGSQTRSFCFVDDLIEGMVRFMNQEETVGPVNLGNPCEFTIKELAELVVELTGSTSKIIYMPLPNDDPKQRRPDITKAKKYLQNWEPQVQLRDGLQKTIEYFKNLDMRRYKDPTKHTAHANSE 338
BLAST of mRNA_Ecto-sp6_S_contig100.730.1 vs. uniprot
Match: A0A7S2WMC7_9STRA (UDP-glucuronate decarboxylase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WMC7_9STRA) HSP 1 Score: 519 bits (1337), Expect = 8.720e-178 Identity = 242/336 (72.02%), Postives = 284/336 (84.52%), Query Frame = 2 Query: 95 AAQARPFLRVLVTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNMACPASPVHYQYNPIKTTKVSFFGAMNMLGLAKRVNARILQASTSEVYGDAQESPQTESYWGNVNCHGVRACYDEGKRVAETLFFDFHRQHKIEVRVARIFNTFGPGMHPYDGRVVSNFIMQALSGEDITIYGDGGQTRSFCFVDDLIEGLVRLMNNDTEIGPMNIGNPTEFTIKQLAEMTVRLTKSPSKIIYKPLPQDDPKQRRPDISFAKSALDWEPNVALEEGLAKTIEYFSKLDMRNFKKPTTHDAHKNSEAEEK 1102
++ A PF R+LVTGGAGFLG+HLCRRL++EGH+VICLDN+FT Q+LN+ DL D+PNFE +RHD+TEPF AEVDQIYN+ACPASPVHYQYNPIKT KVS GAMNMLGLAKR AR+LQASTSEVYGD SPQTE YWG+VN GVR+CYDEGKR AETLFFD++RQ+ +++RV RIFNT+GPGM+P+DGRVVSNFIMQAL GEDITIYGDG QTRSFCFVDDLI+G+VRLMN + +GP+N+GNP EFTIK+LAE V +T S SKIIY PLP DDPKQR+PDI+ AK L WEPN L +GL KTI+YF +D+R +K PT H AH NSE E+
Sbjct: 37 SSDAEPFKRILVTGGAGFLGTHLCRRLVNEGHEVICLDNYFTGQRLNVTDLLDKPNFELIRHDVTEPFHAEVDQIYNLACPASPVHYQYNPIKTMKVSLLGAMNMLGLAKRTKARVLQASTSEVYGDPSISPQTEDYWGHVNPIGVRSCYDEGKRAAETLFFDYNRQNNVDIRVIRIFNTYGPGMNPFDGRVVSNFIMQALKGEDITIYGDGSQTRSFCFVDDLIDGMVRLMNQEETLGPVNVGNPDEFTIKELAERIVEMTGSKSKIIYLPLPNDDPKQRKPDITKAKKFLKWEPNYKLVQGLEKTIKYFQDIDLRRYKNPTKHTAHANSEQVER 372
BLAST of mRNA_Ecto-sp6_S_contig100.730.1 vs. uniprot
Match: R1E5N3_EMIHU (UDP-glucuronate decarboxylase n=4 Tax=Eukaryota TaxID=2759 RepID=R1E5N3_EMIHU) HSP 1 Score: 510 bits (1314), Expect = 8.930e-175 Identity = 237/342 (69.30%), Postives = 285/342 (83.33%), Query Frame = 2 Query: 95 AAQARPFLRVLVTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNMACPASPVHYQYNPIKTTKVSFFGAMNMLGLAKRVNARILQASTSEVYGDAQESPQTESYWGNVNCHGVRACYDEGKRVAETLFFDFHRQHKIEVRVARIFNTFGPGMHPYDGRVVSNFIMQALSGEDITIYGDGGQTRSFCFVDDLIEGLVRLMNNDTEIGPMNIGNPTEFTIKQLAEMTVRLTKSPSKIIYKPLPQDDPKQRRPDISFAKSALDWEPNVALEEGLAKTIEYFSKLDMRNFKKPTTHDAHKNSEAEEKRARNAS 1120
A + P+LRVLVTGGAGFLGSHLCRRL+ +GH+V+CLDNFFTSQK N+ DL +PNFE +RHD+T PF E DQIYNMACPASPVHYQYNP+KT K S GAMNMLGLAKRV AR+LQASTSEVYGD + SPQ E YWG VNC+GVR+CYDEGKR AETL FD+HRQ+ +++RVARIFNT+GPGMHPYDGRVVSNFIMQA++GEDIT+YG+G QTRSFCFVDDL++GL++LMN + IGP+NIGNP EFTIKQLAE+ ++ T S SKI++ PLP DDP+QR+PDI+ A+ L WEP + LE+GL K + YFS LD+ F+KPT H AH N++A+ A AS
Sbjct: 6 AEKKDPYLRVLVTGGAGFLGSHLCRRLVAQGHEVVCLDNFFTSQKTNVADLIGKPNFELIRHDVTTPFFIECDQIYNMACPASPVHYQYNPVKTMKTSVLGAMNMLGLAKRVKARLLQASTSEVYGDPEVSPQPEEYWGKVNCNGVRSCYDEGKRAAETLCFDYHRQNGVDIRVARIFNTYGPGMHPYDGRVVSNFIMQAINGEDITVYGEGKQTRSFCFVDDLVDGLMKLMNQTSTIGPVNIGNPGEFTIKQLAELAIKHTGSSSKIVHLPLPGDDPQQRKPDITKAREILGWEPKIKLEDGLPKAVAYFSSLDLSRFRKPTKHTAHLNTDAQAADASRAS 347
BLAST of mRNA_Ecto-sp6_S_contig100.730.1 vs. uniprot
Match: A0A7S3BWP6_9EUKA (UDP-glucuronate decarboxylase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BWP6_9EUKA) HSP 1 Score: 506 bits (1303), Expect = 9.760e-173 Identity = 237/340 (69.71%), Postives = 283/340 (83.24%), Query Frame = 2 Query: 110 PFLRVLVTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNMACPASPVHYQYNPIKTTKVSFFGAMNMLGLAKRVNARILQASTSEVYGDAQESPQTESYWGNVNCHGVRACYDEGKRVAETLFFDFHRQHKIEVRVARIFNTFGPGMHPYDGRVVSNFIMQALSGEDITIYGDGGQTRSFCFVDDLIEGLVRLMNNDTEIGPMNIGNPTEFTIKQLAEMTVR------LTKSPSKIIYKPLPQDDPKQRRPDISFAKSALDWEPNVALEEGLAKTIEYFSKLDMRNFKKPTTHDAHKNSEAEEKRAR 1111
PFLR+LVTGG GFLGSHLCRRL++EGH V+ LDNFFTSQK N++DL +PNFE +RHD+T+ F EVDQIYNMACPASPVHYQYNP+KT K S GA+NMLGLAKRV ARILQASTSEVYGD + SPQ E YWG+VNC+GVR+CYDEGKR AETL FD+HRQ+ +++RVARIFNT+GPGMHPYDGRVVSNF++QA++GEDIT+YG+G QTR+FCFVDDL++GL+RLMN D IGP+NIGNP EFTIKQLAE+ ++ +T SKIIY PLP DDPKQR+PDI+ AK L WEP + LE+G+ K EYFS LD+ FKKPT H AH N+E E+ A+
Sbjct: 29 PFLRILVTGGCGFLGSHLCRRLVNEGHDVVALDNFFTSQKTNVKDLIGKPNFEVIRHDVTKEFFIEVDQIYNMACPASPVHYQYNPVKTMKTSVVGALNMLGLAKRVKARILQASTSEVYGDPKISPQPEEYWGHVNCNGVRSCYDEGKRAAETLCFDYHRQNGVDIRVARIFNTYGPGMHPYDGRVVSNFLVQAINGEDITVYGEGEQTRAFCFVDDLVDGLIRLMNQDVTIGPINIGNPGEFTIKQLAELAIKTVGVSKVTGKQSKIIYLPLPGDDPKQRKPDITKAKKYLGWEPKIPLEQGIVKAAEYFSSLDLSRFKKPTKHTAHLNTEQIEESAK 368
BLAST of mRNA_Ecto-sp6_S_contig100.730.1 vs. uniprot
Match: A0A7S4LL95_9EUGL (UDP-glucuronate decarboxylase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LL95_9EUGL) HSP 1 Score: 501 bits (1290), Expect = 3.540e-171 Identity = 238/327 (72.78%), Postives = 275/327 (84.10%), Query Frame = 2 Query: 119 RVLVTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNMACPASPVHYQYNPIKTTKVSFFGAMNMLGLAKRVNARILQASTSEVYGDAQES--PQTESYWGNVNCHGVRACYDEGKRVAETLFFDFHRQHKIEVRVARIFNTFGPGMHPYDGRVVSNFIMQALSGEDITIYGDGGQTRSFCFVDDLIEGLVRLMNNDTEI-GPMNIGNPTEFTIKQLAEMTVRLTKSPSKIIYKPLPQDDPKQRRPDISFAKSALDWEPNVALEEGLAKTIEYFSKLDMRNFKKPTTHDAHKNSE 1090
R+LVTGGAGFLGSH+C RL+DEGH VICLDNFFTSQK NI+ LF RPNFEFVRHD+TEP R EVD+I+N+ACPASPVHYQYNPIKT K S+ GA NMLG+AKR NARILQ+STSEVYGD PQ E Y GNV+C G+R+CYDEGKR AETLFFD+HRQH ++++V RIFNT+GP MHPYDGRVVSNFI+QA+ GEDITIYGDG QTRSFCFVDDL+E ++R+M++DT GP+NIGNP EFTIK+LAE+ + LT S SKIIY PLPQDDP QR+PDI+ AK LDWEP V L EGLAKTIEYF LD+ + KPT H AH+NSE
Sbjct: 13 RILVTGGAGFLGSHVCERLVDEGHDVICLDNFFTSQKDNIRHLFGRPNFEFVRHDVTEPIRMEVDKIWNLACPASPVHYQYNPIKTMKTSWLGASNMLGMAKRCNARILQSSTSEVYGDPTPEFHPQPEEYRGNVSCIGIRSCYDEGKRAAETLFFDYHRQHGVDIKVVRIFNTYGPRMHPYDGRVVSNFILQAIKGEDITIYGDGSQTRSFCFVDDLVEAMMRMMDDDTGFTGPVNIGNPGEFTIKELAELIIELTGSKSKIIYLPLPQDDPLQRKPDIALAKERLDWEPKVQLREGLAKTIEYFKGLDLGKYSKPTNHTAHRNSE 339
BLAST of mRNA_Ecto-sp6_S_contig100.730.1 vs. uniprot
Match: A0A7S0EJQ0_9EUKA (UDP-glucuronate decarboxylase n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EJQ0_9EUKA) HSP 1 Score: 498 bits (1282), Expect = 8.840e-170 Identity = 234/328 (71.34%), Postives = 274/328 (83.54%), Query Frame = 2 Query: 110 PFLRVLVTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNMACPASPVHYQYNPIKTTKVSFFGAMNMLGLAKRVNARILQASTSEVYGDAQESPQTESYWGNVNCHGVRACYDEGKRVAETLFFDFHRQHKIEVRVARIFNTFGPGMHPYDGRVVSNFIMQALSGEDITIYGDGGQTRSFCFVDDLIEGLVRLMNNDTEIGPMNIGNPTEFTIKQLAEMTVRLTKSPSKIIYKPLPQDDPKQRRPDISFAKSALDWEPNVALEEGLAKTIEYFSKLDMRNFKKPTTHDAHKNSEA 1093
PFLR+LVTGG GFLGSHLCRRL++EGH VI LDNFFTSQK N++DL D+PNFE +R D+T+ F EVDQIYNMACPASPVHYQYNP+KT K S G MNMLGLAKRV ARILQASTSEVYGD + SPQ E YWG+VNC GVR+CYDEGKR AETL FD+HRQ+ +++R+ARIFNT+GPGMHPYDGRVVSNFI+QA+ GEDIT+YG+G QTR+FC+VDDL++GL+RLMN + IGP+NIGNP EFTIKQLAE+ V S SKIIY PLP DDPKQR+PDI+ A+ L WEP V LE+GL I YF +LD+ FKKPT H AH N++A
Sbjct: 21 PFLRILVTGGCGFLGSHLCRRLVNEGHDVIALDNFFTSQKSNVKDLLDKPNFEVIRGDVTKEFFIEVDQIYNMACPASPVHYQYNPVKTMKTSVMGMMNMLGLAKRVKARILQASTSEVYGDPEISPQPEEYWGHVNCTGVRSCYDEGKRAAETLCFDYHRQNGVDIRIARIFNTYGPGMHPYDGRVVSNFIVQAIKGEDITVYGEGQQTRAFCYVDDLVDGLIRLMNQEHTIGPVNIGNPGEFTIKQLAELCVEKVGSKSKIIYLPLPGDDPKQRKPDITKARKYLQWEPKVPLEKGLDFAITYFRELDLGRFKKPTKHTAHLNTDA 348
BLAST of mRNA_Ecto-sp6_S_contig100.730.1 vs. uniprot
Match: A0A813GYL9_POLGL (UDP-glucuronate decarboxylase n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GYL9_POLGL) HSP 1 Score: 497 bits (1279), Expect = 1.340e-168 Identity = 237/366 (64.75%), Postives = 285/366 (77.87%), Query Frame = 2 Query: 8 GATQEKNKPFVHIMAAMGKTENEFASKLHAAQARPFLRVLVTGGAGFLGSHLCRRLLDEGHQVICLDNFFTSQKLNIQDLFDRPNFEFVRHDITEPFRAEVDQIYNMACPASPVHYQYNPIKTTKVSFFGAMNMLGLAKRVNARILQASTSEVYGDAQESPQTESYWGNVNCHGVRACYDEGKRVAETLFFDFHRQHKIEVRVARIFNTFGPGMHPYDGRVVSNFIMQALSGEDITIYGDGGQTRSFCFVDDLIEGLVRLMNNDTEIGPMNIGNPTEFTIKQLAEMTVRLTKSPSKIIYKPLPQDDPKQRRPDISFAKSALDWEPNVALEEGLAKTIEYFSKLDMRNFKKPTTHDAHKNSEAEEKR 1105
GA Q+ KP+ ++ G E A + + F R+LVTGGAGFLGS LCRRLL EGH+V+CLDN+FTSQ+ NI D P FE +RHD+T PF E DQIYNMACPASPVHYQ+NPIKTTKVSF G M+M+GLAKRV ARILQASTSE+YGD + SPQ+E YWG+VN GVR+CYDEGKRVAETL FD+ R + +++RV RIFNT+GPGMHPYDGRVVSNFI+QAL+ EDITIYGDG QTRSF FVDD ++GL+R+MN + +GP+NIGNP +FT+KQLAE + + S SKIIY PLP DDPKQR+PDI+ AK LDWEP+V L EGL KTI YF LD+R F KPT H AH ++A+ K+
Sbjct: 32 GAEQDARKPWYRGLSRQGAVACE-AKANKDQEVKKFKRILVTGGAGFLGSALCRRLLAEGHEVMCLDNYFTSQRSNIADFIGHPKFELIRHDVTTPFFCECDQIYNMACPASPVHYQFNPIKTTKVSFLGTMHMMGLAKRVKARILQASTSEIYGDPEVSPQSEEYWGHVNTIGVRSCYDEGKRVAETLAFDYMRSNNVDIRVVRIFNTYGPGMHPYDGRVVSNFIIQALNNEDITIYGDGSQTRSFSFVDDTVDGLIRMMNQEETVGPINIGNPNKFTVKQLAETVIEMVGSKSKIIYMPLPGDDPKQRKPDITRAKKYLDWEPHVQLREGLVKTIAYFKALDLRQFSKPTAHTAHLTTDADAKK 396 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.730.1 >prot_Ecto-sp6_S_contig100.730.1 ID=prot_Ecto-sp6_S_contig100.730.1|Name=mRNA_Ecto-sp6_S_contig100.730.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=371bp MAAMGKTENEFASKLHAAQARPFLRVLVTGGAGFLGSHLCRRLLDEGHQVback to top mRNA from alignment at Ecto-sp6_S_contig100:333694..342328- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.730.1 ID=mRNA_Ecto-sp6_S_contig100.730.1|Name=mRNA_Ecto-sp6_S_contig100.730.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8635bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:333694..342328- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:333694..342328- >mRNA_Ecto-sp6_S_contig100.730.1 ID=mRNA_Ecto-sp6_S_contig100.730.1|Name=mRNA_Ecto-sp6_S_contig100.730.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1113bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:333694..342328- (Ectocarpus species6 EcLAC_371)back to top |