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Homology
BLAST of mRNA_Ecto-sp6_S_contig100.710.1 vs. uniprot
Match: A0A6H5KSZ1_9PHAE (Inorganic diphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ1_9PHAE) HSP 1 Score: 168 bits (426), Expect = 7.710e-49 Identity = 94/110 (85.45%), Postives = 101/110 (91.82%), Query Frame = 1 Query: 1 MYTRHDA--AALARERSCNQAEDRTSLREAIEVTSMMVSGRAVATALCALGTTSAFTAPLAGFRAAKGVSRQVTRNVGRNLQMATVAEAYDIKVKGEENTMDYRAFFHQA 324
++T+HD AAL RE+S NQ EDRTSLREAI+ TSMMV GRAVATALCALGTTSAFTAPLAGFRAAKGVSRQVTRN GRNLQMATVAEAYDIKVKGEENTM+YRAFF+QA
Sbjct: 72 VHTQHDTSPAALVREKSYNQ-EDRTSLREAIQATSMMVRGRAVATALCALGTTSAFTAPLAGFRAAKGVSRQVTRNAGRNLQMATVAEAYDIKVKGEENTMEYRAFFNQA 180
BLAST of mRNA_Ecto-sp6_S_contig100.710.1 vs. uniprot
Match: D7FKG7_ECTSI (Inorganic diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG7_ECTSI) HSP 1 Score: 140 bits (352), Expect = 8.230e-39 Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 1 Query: 100 MMVSGRAVATALCALGTTSAFTAPLAGFRAAKGVSRQVTRNVGRNLQMATVAEAYDIKVKGEENTMDYRAFFHQ 321
MMVSGRAVATALCALGTTSAFTAPLAGFRAAKGVSRQVTRNVGRNLQMATVAE YDIKVKGEENTMDYRAFFHQ
Sbjct: 1 MMVSGRAVATALCALGTTSAFTAPLAGFRAAKGVSRQVTRNVGRNLQMATVAETYDIKVKGEENTMDYRAFFHQ 74
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.710.1 vs. uniprot
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
| Match Name | E-value | Identity | Description | |
|---|
| A0A6H5KSZ1_9PHAE | 7.710e-49 | 85.45 | Inorganic diphosphatase n=1 Tax=Ectocarpus sp. CCA... | [more] |
| D7FKG7_ECTSI | 8.230e-39 | 98.65 | Inorganic diphosphatase n=1 Tax=Ectocarpus silicul... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 1 |
| Seed ortholog score | 142.1 |
| Seed ortholog evalue | 1.5e-31 |
| Seed eggNOG ortholog | 2880.D7FKG7 |
| Model size | 325 |
| KEGG ko | ko:K01507 |
| KEGG Pathway | ko00190,map00190 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003824,GO:0004427,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006950,GO:0006952,GO:0006970,GO:0008150,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009651,GO:0009941,GO:0010035,GO:0010038,GO:0010876,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019915,GO:0031967,GO:0031975,GO:0033036,GO:0042221,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0050896,GO:0051179,GO:0051235,GO:0051704,GO:0051707,GO:0065007,GO:0065008,GO:0098542 |
| Exons | 4 |
| EggNOG free text desc. | inorganic diphosphatase activity |
| EggNOG OGs | COG0221@1,KOG1626@2759 |
| EC | 3.6.1.1 |
| Cds size | 324 |
| COG Functional cat. | C |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682348722.347657-CDS-Ecto-sp6_S_contig100:192941..193013 | 1682348722.347657-CDS-Ecto-sp6_S_contig100:192941..193013 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig100 192942..193013 - |
| 1682348722.3577766-CDS-Ecto-sp6_S_contig100:194997..195060 | 1682348722.3577766-CDS-Ecto-sp6_S_contig100:194997..195060 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig100 194998..195060 - |
| 1682348722.3671758-CDS-Ecto-sp6_S_contig100:195382..195516 | 1682348722.3671758-CDS-Ecto-sp6_S_contig100:195382..195516 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig100 195383..195516 - |
| 1682348722.3748507-CDS-Ecto-sp6_S_contig100:195707..195762 | 1682348722.3748507-CDS-Ecto-sp6_S_contig100:195707..195762 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig100 195708..195762 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.710.1 >prot_Ecto-sp6_S_contig100.710.1 ID=prot_Ecto-sp6_S_contig100.710.1|Name=mRNA_Ecto-sp6_S_contig100.710.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=108bp
MYTRHDAAALARERSCNQAEDRTSLREAIEVTSMMVSGRAVATALCALGT
TSAFTAPLAGFRAAKGVSRQVTRNVGRNLQMATVAEAYDIKVKGEENTMD
YRAFFHQA back to topmRNA from alignment at Ecto-sp6_S_contig100:192942..195762- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig100.710.1 ID=mRNA_Ecto-sp6_S_contig100.710.1|Name=mRNA_Ecto-sp6_S_contig100.710.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2821bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:192942..195762- (Ectocarpus species6 EcLAC_371)
ATGTACACACGACACGACGCTGCTGCACTCGCGCGTGAAAGGAGCTGCAA
TCAAGGTGAGGTGTGAATTTGCGCAACGTTTTTGACAAGCCGCTTGGTGT
AGTAAAGTGACGCGAGCTTGGGGCTTGTAGGGGATGATGGTTGCTGGGGT
GCAAATACAATGTGTAATGTCAAACATACCTCCACGCCTCCCTCCCCACA
CGCACGCATACACGCATACATGCAACCACCTTGCGCGTGGATCCAGCAGA
GGATCGCACCAGTCTCCGGGAAGCCATCGAAGTTACTAGCATGATGGTCA
GCGGAAGGGCAGTCGCCACGGCTTTATGTGCTCTGGGCACCACCTCCGCG
TTCACAGCCCCGCTGGCAGGCTTCCGAGCGGTGAGCGAAGTGTGCGAGAT
GACAGGTTCAACACACGGTTGCCAACCAACTACAATTGTATTCTACAGCA
GTATGCATACAAAACAGCTGCCGCAGCAGCAGCAGCAGGAGCAGGAGTGC
TCTGGTGTATCGTCGCACGGCCGCGTTTGCGTGTCTTTAACTCTCAAGGT
AGCCTGACGTTTGCGTGGAGCGTTTTCTTGAGCATGCTAGTCGTTTGTTT
TGGCACGAGCTTTACACGTTGTGTGTTGGCCTGGTCGTTGATGTCGCTCG
CTCGGTACGCGTCGTGTGTGCATGTCTCTCGATGTTCCTGGTGCTGGTGC
AGGCTAAGGGCGTGTCGAGGCAGGTCACCCGGAATGTCGGGAGAAACTTG
CAGATGGCCACCGTGGTGAGTTCCCGTGGAACCAGACTACGGTCTTCCAG
TCGGTGTTGGTGGCGAAATGAACTGCCGTGGAGGTTTTAACAGCAGTCAT
GACACAGCAGGCAGCGGTGAAGATCAGGTGTCCGCACACGGCTGACAAAC
TGTTCCTGCTGGCTTGCACGTCCATGTTATCAAGAGACACGTGCGATGTG
TTCTTTGTTATTTCTTAGGAGAGAAAGTTGGTGCTGATGCCACATGGCGA
AACCGGAGTTTTCTCCCAAGGGAGGTTCGTTGTGGACCTGGCAGAATCGT
GCAAGCAAGGCTCTCGTATGTACGTACACACATGCATTCCGTCTCCGCCG
GCGCCAGTCTGCCGTACCACCTCTTTGATAAGGTGTTGCACACTCACAGC
CCGGAAATCCGTGGGTAGTCTAACCCTAGAGCCATGAGTGTGCCCTGTGT
AGAACCGGCCTCTCATCATCGCGGCTTCAGTACCCAACAGGTGCTATTTT
ACAGCAGACAAGTGCGCCCCGGCAGCAGCTACGCGCTGTGTTGTTCCAAT
CTCCCGTACCCAACAACGGACGGTGCAATGCTTTCCGAAGTCAGTCGGGG
TCAGTGCTTTCGTGGTGGCTTGCCTCGAACAGGTCGTATAGATGCGACGA
GCGAGGTGTGGGTGATGTCGCACGCATTGTCCCTGTGAGTTGGCCTCTCA
ACCCTGAAACACTCCCCATGCATGTTTGTGTCGTCGTGCCTTACCGCAAG
AGGCGGAGAGATAGCACCGGGTTGTTGTTGTTGTCTTCACATCGAACCGT
TCTGATCTCTGTACCGGTACAATCTTCATCTGTCCGTTCTAGTCTAGCAC
TTGACGCGGTCGATTCTTGTTGTAAATGTTATCCCGGTGCTTGCCTTTTG
TACCAGAGAGTTGTCTTCTTGTCCCGGATCGGTGTGGCCCTCCAGCTCTG
GACTCTTTCCTTTCCTGGCCTTTCCTCTCTCTGGCGCATACCCTCACAGC
TCGCGGTGTCTCTGCCACCCTCACCGTGTGCGATCGTTATTTTCTACGCC
ATTAAGTTTTTCCTCCATGCTCTTTGTCGCACCCCGGTGCGGAAATGCAA
ACCAATCACTTCATTTAGTTGTTTCCAAGTCACCCGGTGCGATCTCTCCG
ACCGGTGCGATGCCCAGTGGAATGGACACACACGGGCCTACTCGTGCTCG
GCGGTGTTGTATGCACGCACCCGGGTGCCATCTCCCCGACCGGTGACATC
TCTCCACCTCTGAGTATGTTGGTACCGGTGCAGGTACCAACAAGCAGACG
ATGTGCGTGTACCCTACACGAACGTAGGCTGGTAGTACATAGCAGCTTTC
CATGCAGCGAATGGCCGTGAGTTTGAATGCGAGTTGGGCTGTGGCGTGAC
AAGGACAACAAACGATGTTTTGCATCTGGGGTACCGTTACATACGGTATG
AGGTTGTCTCCCGCTTTCGTTTCGGTCTTCCTCTACGAATACCAGTTATC
AAGAGCAGCAGAACATAACATTTCCTTTCGAAAGGCGCGGTATGTTGTGT
GCTTGGCGCACAGTTTGCAATTCCATACTGACCACATGAAAACAACAGAC
GATCCCGCGCGAACCGCGCCGAACGTACACACGTACATGAAGGAGTGGTG
CTCCGCTGATACCGCCACCACATGTAAAACGTACCCGCATGTACCTCTTT
ACGGCACAATCTTGGATTTGAGGGTCGGTGAGATCCCGCCCCGTGTGATC
TCACTCGACCCGGGTGCGGAAATACAACAAACTCATGCCAGTTTTTGTTT
GTTCTCACCTTGTACCAGCTTTCCGACCCGTGCCATCTCTCCAATTCTTA
CGGTAACCCACAGAGACAGGTTCGGTCGCCATGTTTGAAACGGCGCATGT
ACAGAAATAAGGGCGAGAGTCACAGATCACAACGTTTAATGTTCGTGCGT
GTTTTTCTCCTGTAACCCGCTTTTCTTTCATGTTGTGCGTGCCGCACAGG
CCGAGGCATACGACATCAAGGTGAAGGGCGAGGAGAACACGATGGACTAC
CGCGCGTTCTTCCACCAGGCG back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig100:192942..195762- >mRNA_Ecto-sp6_S_contig100.710.1 ID=mRNA_Ecto-sp6_S_contig100.710.1|Name=mRNA_Ecto-sp6_S_contig100.710.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=324bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:192942..195762- (Ectocarpus species6 EcLAC_371)
ATGTACACACGACACGACGCTGCTGCACTCGCGCGTGAAAGGAGCTGCAA
TCAAGCAGAGGATCGCACCAGTCTCCGGGAAGCCATCGAAGTTACTAGCA
TGATGGTCAGCGGAAGGGCAGTCGCCACGGCTTTATGTGCTCTGGGCACC
ACCTCCGCGTTCACAGCCCCGCTGGCAGGCTTCCGAGCGGCTAAGGGCGT
GTCGAGGCAGGTCACCCGGAATGTCGGGAGAAACTTGCAGATGGCCACCG
TGGCCGAGGCATACGACATCAAGGTGAAGGGCGAGGAGAACACGATGGAC
TACCGCGCGTTCTTCCACCAGGCG back to top
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