Homology
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match:
A0A6H5KG41_9PHAE (Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG41_9PHAE)
HSP 1 Score: 422 bits (1085), Expect = 5.080e-148
Identity = 231/240 (96.25%), Postives = 234/240 (97.50%), Query Frame = 1
Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXASEQPAGRGKPVVIPSVVRSDSSLS 801
MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVA SGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAV AL+GGWNEVACQPELFWLDALGALQDV FGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXASEQPAGRGKPVV+PS S+SSLS
Sbjct: 1 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVATSGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALIGGWNEVACQPELFWLDALGALQDVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXASEQPAGRGKPVVLPS---SESSLS 237
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match:
D7FKH0_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH0_ECTSI)
HSP 1 Score: 451 bits (1159), Expect = 4.400e-146
Identity = 250/260 (96.15%), Postives = 253/260 (97.31%), Query Frame = 1
Query: 1 MAASWGRILLQLALLCSSLISAVWASDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXASEQPAGRGKPVVIPSVV 780
MAA G+ILLQLALL SSLISAVWASDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNA+LMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAV ALLGGWNEVA QPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXX ASEQPAGRGKPVV PSV+
Sbjct: 1 MAARGGQILLQLALLFSSLISAVWASDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNAQLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVAWQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXRASEQPAGRGKPVV-PSVI 259
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match:
UPI00026585B1 (proteasome subunit beta type-2 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026585B1)
HSP 1 Score: 148 bits (373), Expect = 1.370e-40
Identity = 68/200 (34.00%), Postives = 129/200 (64.50%), Query Frame = 1
Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGE 681
M +L+G+K RDFVLL D++ RS++++ + +K+ +LSD++ +A +G+ GD F +++ +N +L ++ + + + A+F R+NLAD LR + A + + LLGG++ + +PEL+W+D LG+L V F AHG F++ ++D +R M+++EA L+ C +++ +R+L + F V+D +G RD++ ++ E
Sbjct: 1 MESLIGIKCRDFVLLAADASVARSIMVLKQDEQKIFKLSDSLAMAVAGESGDTVQFADYIAKNIQLFKMRNGYGLSPKAAANFTRKNLADSLRTRNAYRCDL-LLGGFDSHSKEPELYWVDYLGSLAKVPFAAHGYGGIFSMGVIDAAYRADMTVEEAHSLIRACVKEIRKRFLGNMPVFKCVVIDTNGIRDLSDVKVDE 199
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match:
D2V0Q9_NAEGR (Proteasome subunit beta n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V0Q9_NAEGR)
HSP 1 Score: 143 bits (361), Expect = 1.140e-38
Identity = 75/194 (38.66%), Postives = 127/194 (65.46%), Query Frame = 1
Query: 85 NTLMGVKGRDFVLLGGDSAFFRSVVIM-DTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEV-ACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 660
+T++G+KG+DF LL D+ S+++M DTE + + N+L+AA G+QGD FVE++ +N L +L + + + AHF R+ LA LR G Q I ++GG +++ +PEL+++D L ++Q+V +GAHG S F LS+LD +++GM+L+EA ++ C ++++R L+++ F +KVVDK G R+V
Sbjct: 3 DTVIGLKGKDFTLLAADTTASFSIILMKDTEDKITAVPNQNILIAAQGEQGDRVQFVEFITKNLNLYRLRNDTNLSVKASAHFVRQELAKALRS-GPYQTNI-MVGGVDDIEGAKPELYYIDYLSSMQEVKYGAHGYGSYFTLSILDKHYKDGMNLNEALIVLRMCVAEIQKRLLLNTPSFIVKVVDKYGSREV 194
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match:
A0A8J1XMY1_OWEFU (Proteasome subunit beta n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XMY1_OWEFU)
HSP 1 Score: 142 bits (359), Expect = 1.700e-38
Identity = 72/201 (35.82%), Postives = 125/201 (62.19%), Query Frame = 1
Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEE 684
M L+G+KG+DFV++ D+ RS+V M ++ K+ +LSD +++A SG+ GD F E++ +N +L ++ + + R A+F RRNLA+ LR + Q V L+GG++E P LF++D L AL + F AHG S F LSLLD +R+ ++ + A L+ C ++++R++V+ F ++ ++KDG D+ + G++
Sbjct: 1 MECLIGIKGKDFVIVASDTISARSIVSMKQDHDKMFKLSDKIVMACSGESGDTVQFAEYISKNIQLYKMRNGYELSPRAAANFTRRNLAEYLRSRTPYQ-VNMLIGGYDETD-GPSLFYMDYLAALIEAPFAAHGYGSFFVLSLLDRYYRDDVTQEGAIKLLHQCIDEVQKRFIVNLPTFKVRCINKDGITDLPDLRAGKQ 199
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match:
A0A1Y1NKF7_PHOPY (Proteasome subunit beta n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1NKF7_PHOPY)
HSP 1 Score: 142 bits (357), Expect = 3.700e-38
Identity = 69/196 (35.20%), Postives = 125/196 (63.78%), Query Frame = 1
Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACI 669
M L+G+K RDFV++ D S+++M T+ K+ LS+ +++A SG+QGD F E++ +N +L ++ + +GA+ A+F RRNLA+ LR + A V LL G+++ P+L+++D L +L +V F +HG F+L+++D + E ++ +EA +M+ C R++ +R +V+ F ++++DKDG RD+ I
Sbjct: 1 MECLLGIKCRDFVIVAADMTKAHSIMVMKTDENKLHTLSNKIVMAISGEQGDTTQFAEYIAKNIQLYKMRNGYELGAKAAANFTRRNLAEGLRSRNAYH-VNMLLAGYDDQE-GPQLYFVDYLASLANVKFASHGYGGFFSLAIMDRYYSEDLTPEEAYDIMKKCIREVHQRLIVNLPNFKLQIIDKDGIRDLPAI 194
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match:
A0A284RK40_ARMOS (Proteasome subunit beta n=4 Tax=Physalacriaceae TaxID=862241 RepID=A0A284RK40_ARMOS)
HSP 1 Score: 141 bits (355), Expect = 5.850e-38
Identity = 74/193 (38.34%), Postives = 115/193 (59.59%), Query Frame = 1
Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 660
M L + G+ +V++ D+ RS+V M + K+ LS ++L+A SG+ GD F E+++RN RL Q+ ++ P+G A + RR+LA+ LR + AV LLGG++ +P L+W+D LG + +V F AHG S F LSLLD SL+E ++ C ++ +R +VS + +KVVDKDG R+V
Sbjct: 1 MENLFAITGKGYVIVAADTTSARSIVKMKVDEDKIKVLSPHLLMAYSGEPGDTIQFAEYVERNIRLFQIRNTYPLGPSAAASWIRRSLAESLRSRKP-YAVNLLLGGYDTTKHEPHLYWVDYLGTMTEVPFAAHGYGSYFVLSLLDRYHNPEASLEEGLATLKRCIAEVAKRVVVSPGQYKVKVVDKDGSREV 192
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match:
A0A4S8L3M7_DENBC (Proteasome subunit beta n=3 Tax=Agaricales TaxID=5338 RepID=A0A4S8L3M7_DENBC)
HSP 1 Score: 140 bits (354), Expect = 8.250e-38
Identity = 75/193 (38.86%), Postives = 115/193 (59.59%), Query Frame = 1
Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 660
M T + G+ +V+L D+ RS+V M ++ K+ LS ++L+A SG+ GD F E+++RN RL Q+ ++ P+ A + RR+LAD LR + AV LLGG++ P L+W+D LG + ++ FGAHG S FALSLLD +L+E + C ++ +R +VS + +KVVDKDG R+V
Sbjct: 1 METSFAITGKGYVILAADTTSARSIVKMKSDEDKIKTLSPHLLMAYSGEPGDTIQFAEYIERNIRLYQIRNNYPLRPPAAASWIRRSLADSLRSRKP-YAVNLLLGGYDTTTYTPHLYWVDYLGTMTELPFGAHGYGSYFALSLLDRYHDPEATLEEGLATLRRCIDEVSKRLVVSPGKYKVKVVDKDGIREV 192
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match:
A0A0C3PRE6_PHLGI (Proteasome subunit beta n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3PRE6_PHLGI)
HSP 1 Score: 140 bits (354), Expect = 8.250e-38
Identity = 74/193 (38.34%), Postives = 114/193 (59.07%), Query Frame = 1
Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 660
M G+ G+ +VL+ D+ SV+ + + K++EL+ ++L+A SG+ GD F E+++RN RL Q+ +S P+ + A + R+ LA LR + +V LLGG++ P L+WLD LG L +V F AHG S FALSLLD SL+E ++ C ++ +R +VS F +KVVDKDG R++
Sbjct: 1 MEVSFGITGKGYVLVAADTTAAHSVIKVKNDVDKIIELNPHLLMAYSGEPGDTVQFAEYVERNIRLYQIRNSLPLRPPSAASWVRKTLAQSLRSRSP-YSVNLLLGGYDTSDYTPHLYWLDYLGTLVEVPFAAHGYGSYFALSLLDRYHDPEASLEEGIETLKRCIAEISKRLVVSPERFKVKVVDKDGVREI 192
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match:
F8NQX0_SERL9 (Proteasome subunit beta n=4 Tax=Agaricomycetidae TaxID=452333 RepID=F8NQX0_SERL9)
HSP 1 Score: 140 bits (353), Expect = 1.160e-37
Identity = 75/193 (38.86%), Postives = 116/193 (60.10%), Query Frame = 1
Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 660
M T + G+ +V++ D+ RS+V M + K+ E+S ++L+A SG+ GD F E+++RN RL Q+ + P+ A + RR+LAD LR + +V L+GG++ +P+L+W+D LG DV FGAHG S FALSLLD SL+E ++ C ++ +R +VS + +KVVDKDG R+V
Sbjct: 1 METSFALTGKGYVIVAADTTAARSIVKMKVDEDKIKEISPHLLMAYSGEPGDTVQFAEFVERNIRLYQIRNLYPLRPSAAASWIRRSLADSLRSRSP-YSVNLLVGGYDTATHEPKLYWIDYLGTQVDVPFGAHGYGSYFALSLLDRYHDPEASLEEGLATLKRCVDEVAKRLVVSPGRYKVKVVDKDGVREV 192
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 5.08e-148 / Id = 96.25 Expect = 4.40e-146 / Id = 96.15 Expect = 1.37e-40 / Id = 34.00 Expect = 1.14e-38 / Id = 38.66 Expect = 1.70e-38 / Id = 35.82 Expect = 3.70e-38 / Id = 35.20 Expect = 5.85e-38 / Id = 38.34 Expect = 8.25e-38 / Id = 38.86 Expect = 8.25e-38 / Id = 38.34 Expect = 1.16e-37 / Id = 38.86 Sequence A0A6H5KG41_9PHAE D7FKH0_ECTSI UPI00026585B1 D2V0Q9_NAEGR A0A8J1XMY1_OWEFU A0A1Y1NKF7_PHOPY A0A284RK40_ARMOS A0A4S8L3M7_DENBC A0A0C3PRE6_PHLGI F8NQX0_SERL9 Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 453.0 Seed ortholog evalue 9.8e-125 Seed eggNOG ortholog 2880.D7FKH0 Preferred name SCYL2 Model size 804 KEGG ko ko:K02734,ko:K08471,ko:K12847,ko:K16738,ko:K17541,ko:K18626 KEGG Pathway ko03040,ko03050,map03040,map03050 KEGG Module M00337,M00340,M00354 Hectar predicted targeting category signal peptide GOs GO:0000003,GO:0000139,GO:0000166,GO:0000502,GO:0002090,GO:0002092,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005829,GO:0005839,GO:0005886,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006898,GO:0007034,GO:0007041,GO:0007088,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007346,GO:0008047,GO:0008144,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009893,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010008,GO:0010033,GO:0010243,GO:0010498,GO:0010499,GO:0010564,GO:0010604,GO:0010638,GO:0010646,GO:0010648,GO:0010950,GO:0010952,GO:0010965,GO:0012505,GO:0014070,GO:0016020,GO:0016055,GO:0016192,GO:0016301,GO:0016310,GO:0016504,GO:0016579,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019222,GO:0019538,GO:0019774,GO:0019941,GO:0023051,GO:0023052,GO:0023057,GO:0030071,GO:0030100,GO:0030111,GO:0030135,GO:0030136,GO:0030162,GO:0030163,GO:0030178,GO:0030234,GO:0030554,GO:0031090,GO:0031323,GO:0031325,GO:0031331,GO:0031410,GO:0031597,GO:0031623,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032006,GO:0032007,GO:0032268,GO:0032270,GO:0032436,GO:0032501,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0032588,GO:0032879,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0035639,GO:0036094,GO:0036211,GO:0042175,GO:0042221,GO:0043085,GO:0043112,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045807,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046907,GO:0048046,GO:0048259,GO:0048260,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0060070,GO:0060255,GO:0060627,GO:0060828,GO:0061133,GO:0061134,GO:0061135,GO:0062033,GO:0065007,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071944,GO:0080090,GO:0090068,GO:0090090,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098657,GO:0098772,GO:0098791,GO:0098805,GO:0098827,GO:0140096,GO:0198738,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1902531,GO:1902532,GO:1903052,GO:1903364,GO:1903432,GO:1904262,GO:1905114,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2000286,GO:2000369,GO:2000370,GO:2001252 Exons 5 EggNOG free text desc. receptor internalization involved in canonical Wnt signaling pathway EggNOG OGs COG0638@1,KOG0177@2759,KOG2137@1,KOG2137@2759 Ec32 ortholog description hypothetical protein Ec32 ortholog Ec-12_002115.1 EC 3.4.25.1 Cds size 804 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko01000,ko01001,ko01002,ko03036,ko03041,ko03051,ko04030,ko04131,ko04812
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348721.9821768-CDS-Ecto-sp6_S_contig100:172272..172665 1682348721.9821768-CDS-Ecto-sp6_S_contig100:172272..172665 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 172273..172665 - 1682348721.9938438-CDS-Ecto-sp6_S_contig100:173419..173566 1682348721.9938438-CDS-Ecto-sp6_S_contig100:173419..173566 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 173420..173566 - 1682348722.0029616-CDS-Ecto-sp6_S_contig100:174035..174128 1682348722.0029616-CDS-Ecto-sp6_S_contig100:174035..174128 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 174036..174128 - 1682348722.012204-CDS-Ecto-sp6_S_contig100:174567..174659 1682348722.012204-CDS-Ecto-sp6_S_contig100:174567..174659 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 174568..174659 - 1682348722.0210955-CDS-Ecto-sp6_S_contig100:176894..176973 1682348722.0210955-CDS-Ecto-sp6_S_contig100:176894..176973 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 176895..176973 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.704.1
>prot_Ecto-sp6_S_contig100.704.1 ID=prot_Ecto-sp6_S_contig100.704.1|Name=mRNA_Ecto-sp6_S_contig100.704.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=268bp
MAASWGRILLQLALLCSSLISAVWASDMNTLMGVKGRDFVLLGGDSAFFR back to top mRNA from alignment at Ecto-sp6_S_contig100:172273..176973-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.704.1 ID=mRNA_Ecto-sp6_S_contig100.704.1|Name=mRNA_Ecto-sp6_S_contig100.704.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4701bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:172273..176973- (Ectocarpus species6 EcLAC_371)ATGGCGGCCAGCTGGGGGCGAATCCTGCTGCAGTTGGCGCTGCTGTGTTC
GAGCCTGATATCTGCCGTATGGGCTTCTG GTAAGCCTGAGTTATTGTATC
ACCACCACAGGCACTGGGTGTTGTACGGCTGTCTGTGTATGCTGCTGAGT
ACTCCACTATCTGTGCATCTGACAACAGCTGTGTGAACTGATGGACTAGA
TGTTAATGTTGTCAGGAGGCTTCCAAGTCTCGCGTATGGTGGCGTTGGTA
CCCGATAGACGTATTTTACATTGTACCCAAGTACCTTGCAATGACTTCTT
TAACTGGAAGCAATTGTCCCAATATTTACAGCAGTAAACACCGATAAAGC
CGGCACCAACATCGATTCTGGGTGTTGTGCAGTGGGTATCCTTGTGTAGT
ACAAGCAGGTAACCTTCTTGACGCTCTGCACATATGGATTACTTCACACT
GCAGCAGAACGAGTAGTGGTGCCAAGAATGGCGGCGTAGGAACCGTGTCG
TCCAGAGCTTCCGAAAGGTGTCATTTGATTTTGGCATCCTCCTCGTTGTT
GAGTATTGAGCTTTTGAACAACGGTCCAGGGGAGGTGGTATCTTGCGTAA
CCTGGTATCGTTCCTCGTGTGTGATGCCGGCCGTTTGTGTTGATTTTGTT
TTTGTTGCTTCCGTCTTCACAGTAATAAACGTTCCGGTCTCTGCCCAATA
CAGTACCATTTGACACCCGTACCGGTCCAACTGACGCGAACGCGTTCCGT
GGTCAGAGGACAAGTACAGCAAAAATCACACTTCGTAACCACTGGCTCGT
GCGTCCAGAACGTATGCTGTAGGCGAAGATACACCCACAACTCTTGCACC
TGCGCATTGTAGCCAACCTGCTGGGGCAACGGTCAAACAATGGTACGCGT
TTTTCTTTTGCGCCTCACGCTGATGTGCCCTGGCATAAGACAGGGTATCG
AGTTCTTGTCTCGAAAATTGTTTGAAGTACACGATTTTGGCCGTGACACC
AAGGGAGGGTATATTTTCATTTTTTCGGGGCTGCTCAGCTCCCGTTCGCA
CGCTCGGCTGCCGCCATTAATACTGTACCCGCTACAGGCCGAAATTCTGG
GTTATTCGCCCGAGCATATGACCGCGTGAATAAGGGCCCGGACGATCAAT
TTGGTCAATTGCGGTTTGGAACAACTGCTGTACTGTCGTACATGACCCGT
GTAGGACCTTGACCCCACCACCTCAACCCTGACCCCATTTGCTATGTACA
ATAGGCAGATGTCGATCACTTCGTCGCAAGAGTAGGCCGGGACATCGCAC
CGGCGGGACTGCCTTCCAGACTTCTGTGCCCGTTGTGTACTACTGTGTGT
GCTGCATTGTCAAAGTTTTCTCGGCGACCAATTGTTTTAATTGTTTCTTG
TCGGCCGGATGCCGTGTTGTGGCCGAAAGCATCAGAGTACAGCAAAGGAT
GTTGAAAATCAGAGGCTCCGGGTCTGCTGAGACTGTGTAGTCACGAACAG
TTCCGTAGTGTTTTTTCCGGTGCTAGATTGCTTGGTGTGTTCCTTTGAGC
GAATGTCAGATCTGCTGAAAAGGTCCTCAATATTACCAAGATAATAGGCT
GATGGCGCAAGTAGTCTATCTGCTCATGTGACCTGTGCTATGGCGATTGC
AGCAGTGAGCAAGCAAGGTCACAGAAGCGTGCGTGTGCGACACTTTGTTG
ACAGGTGTGCGGAGGTGCACTGTAGACGTGAGTTTACAACCTTACTGAAT
GGAATTTGGTTCAAAGAGAAATGAGAAAATACGTTGTACAAGTTTGTTGT
ATTGTTGAGCTGGGCAGGAAACAGCATGAGCTCCGGTGGGGGGCGTGCCT
CTGCCTGGTCAGCCTGTTTGTCGAGTACCTACGAAAGTACGAAGAACCTC
AGTACCAGTCCGGAACCGTTCCGGGAACCTTTCTAATCTTACTTGGAATT
TTCCTGACAACGATCCTGAGAACCGTTGTAAAAAAATATGCTCGATCTAG
GAAACATTCTACGAACCGTTGCGGAATCTACAGCATCTATCAGCGGATCG
TTCTAGCTACCTTTCCTACACTTGTTCTTCAAGTTGAAGTTTCTCCTTCA
GTAGCTTATTATATCGCGTTTAGTGTGCCGTGTTGTTTTGTAGTACGAAA
TCGCTCATGATGTATGTGACATCGTACAGTATACTGCATTGTATTCATGA
GAATACTTGTAACAACAGTCCCAGTTGATACTGATATTTTTTACAGGATA
TTGCCCTGTTTATACTGTTTCCCTCTTCCCTGACCCCGTCCCCACTCCAA
TCAAACGCTCTCAGACATGAACACCTTGATGGGGGTAAAAGGTCGCGACT
TCGTGCTGCTAGGGGGCGACAGCGCCTTCTTTCGGTCGGTGGTCATCATG
GACACG GTAAGCTACGGTGTTCTCGAGCCCTTTTCTCTTGTCGAAATGGC
GACCGCACACATGCGCCGAAAGGTCTGTAAACCGGCGCCAGAATAGATGG
GGACGAACACACACACACACAGCTTCTATCTCTGCGTCTTGCGATGATAT
GGCAGTAGGCTATCTGCCGAGACATGCATGCCACCCTCTCTGTGTTCACC
CTGGTGCTCGTGATCACACGGGTGGCTCGAGACGGAAGCTTGTAAACACC
ATTCGCTGTGTACCCGTTGCACCAGACGGCAACTCTCAGGTCCCGTTCAA
GTGATGACTGCCGGCGCCCGAATCAAAGCACCACGTGGAGCAGCGGTGAC
GATTCACTGGCCGGTGATTGCCCGCAGTCAAGCAGGACAGACAGTGCTTG
TCGTCTGGGCTAAACATTCATGATTTCTTTCTGCCGTGTCCCCAGGAGTA
TCGAAAAGTGGTGGAGCTATCGGACAACGTGCTGGTTGCGGCGTCCGGTG
ACCAGGGTGATGTTGAGATGTTCGTGGAGTGGCTCAAG GTAACAAGAATA
CTGTCCCCACAACCAGCAGTCCCGCACACACGATACCAATGTGCATCTGT
TCGAATTTCAGGTGATGTCATCGGTGACCCAAAGGGAAGGGGCGCGTGAA
GCGATGGACCGGTCTCTCAAGCTGGCTGTTGGTTAGAAGCAAAAATTTAA
CACCCCCGTCAGCGGTCGAATAATCTAATTGTAGGACTCAAAGACGCTGC
TGCCGTGACTGAGTGTTGCCACCGGTTTCAATATGAGAGTCGGCCCCAGA
GAGAGGTCCTCGCTGTCGTTTTCGTGTTGCATTCCATAGCGCTCATGGCG
CGGAAGTAGTACCGGCAGTCAAAGACAACCTTTGGCTTTGGATTTTTGAC
GACGAACAGTAAGTGCGTCGTGTGGGCCACCTCGTTCTTGTCTTGCGGCC
TGGCCCAACCGCGCTTGCCGAACCCCTCCCTCTCTCACTGCGCGTGCGCA
TCGTCAGCGAAATGCACGGCTGATGCAGCTTGAGTCCTCGCGACCGGTGG
GCGCGCGAACGTTAGCGCACTTCGCGAGGCGGAACCTAGCCGACAAGCTG
CGAAAACAGGGGGCGGGGCAGGCAGTGATTGCGCTTCTCGGCGGGTGGAA
CGAG GTGCGCGTGCTTGCTGAAAATGGCGAATGTATATTATTTGTAAATA
TACAACACAAACGCAGAAAGACTACCCGTTCGAGATATGCACACAACCAC
AGCAGTCGAAGGGGATGTGTTGGAGTCTTTGCAGTGAGTGGAGGGAAACC
GGCTGGGCACTGGGCTCATTTCGAGTTATTTAAGCCTGTACACTGAACTT
TTGTCGGTGATGCCAACAGGTGCTAATCACGAAATATATACGGAGTATGC
AGGGTCTGGTGTTTTCGATGGGCGCAAGATGTTTTTGTGTGTGTGCATTT
TCGCGATGTGTCGTAAATGACGGAGCACGTGAATGGCGGAGCACGTGACG
TTCTACCGCAAGCTCGCCTGCTTAGATACCGACTCACACATTTCCATCCA
CTTTTTTCTTTACCCGCGCCTTTGCCTCTGATGGCGCAGCGAAAATGCCC
GCCACACCTATCTATAACAAACCGTATTTTCGCTACTAAGCAGCGTTCAC
CGATTGGATGTCTGAGCATGCCAGGACCTCGAATGCACCCACCTCACTTG
TCAGTACACGCAAATGCTCACAGCGGACAGCGTTAAAGTGTTTTGACCTT
GCTTTGGTCCCCCCTACGCTGCACAGGAACTCATTTAGCTTTGTCCGATT
TCTTCTTCGATCGAGCCAACAGCGTTCGATTCGTTGATGTCAAGGTCTAG
ACAGCTTCGTGTATGGTTTGCCACTTGTTCCTTGATTTTACGCTCTCTCT
GCACGCAGGTCGCGTGCCAGCCTGAGCTGTTTTGGCTGGACGCCTTGGGC
GCTCTCCAGGACGTCGCGTTCGGCGCGCACGGCCTAGCCTCGCGTTTCGC
GCTGAGCCTTCTCGACAACGGCTTTCGCGAGGGCATGTCTCTCGACGAAG
CGCGACATCTCATGGAAACGTGCTTCCGGCAGCTGGAGCGACGATACCTC
GTCAGTTCTGTGGGCTTTAGCATGAAGGTTGTGGACAAAGATGGTTGCAG
AGACGTAGCTTGTATTGAGCGAGGGGAAGAGGGGACCGGCGGACGGGGGG
GGCGGGGGGGGGGGGGGGGGGGTGCGTCAGAGCAACCTGCTGGTAGAGGT
AAACCGGTTGTTATTCCATCAGTTGTGAGAAGCGACTCGAGTTTAAGTTA
A back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:172273..176973-
>mRNA_Ecto-sp6_S_contig100.704.1 ID=mRNA_Ecto-sp6_S_contig100.704.1|Name=mRNA_Ecto-sp6_S_contig100.704.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=804bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:172273..176973- (Ectocarpus species6 EcLAC_371) back to top