mRNA_Ecto-sp6_S_contig100.704.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match: A0A6H5KG41_9PHAE (Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG41_9PHAE) HSP 1 Score: 422 bits (1085), Expect = 5.080e-148 Identity = 231/240 (96.25%), Postives = 234/240 (97.50%), Query Frame = 1 Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXASEQPAGRGKPVVIPSVVRSDSSLS 801
MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVA SGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAV AL+GGWNEVACQPELFWLDALGALQDV FGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXASEQPAGRGKPVV+PS S+SSLS
Sbjct: 1 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVATSGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALIGGWNEVACQPELFWLDALGALQDVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXASEQPAGRGKPVVLPS---SESSLS 237
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match: D7FKH0_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH0_ECTSI) HSP 1 Score: 451 bits (1159), Expect = 4.400e-146 Identity = 250/260 (96.15%), Postives = 253/260 (97.31%), Query Frame = 1 Query: 1 MAASWGRILLQLALLCSSLISAVWASDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXXASEQPAGRGKPVVIPSVV 780
MAA G+ILLQLALL SSLISAVWASDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNA+LMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAV ALLGGWNEVA QPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXX ASEQPAGRGKPVV PSV+
Sbjct: 1 MAARGGQILLQLALLFSSLISAVWASDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNAQLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVAWQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEEXXXXXXXXXXXXXRASEQPAGRGKPVV-PSVI 259
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match: UPI00026585B1 (proteasome subunit beta type-2 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026585B1) HSP 1 Score: 148 bits (373), Expect = 1.370e-40 Identity = 68/200 (34.00%), Postives = 129/200 (64.50%), Query Frame = 1 Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGE 681
M +L+G+K RDFVLL D++ RS++++ + +K+ +LSD++ +A +G+ GD F +++ +N +L ++ + + + A+F R+NLAD LR + A + + LLGG++ + +PEL+W+D LG+L V F AHG F++ ++D +R M+++EA L+ C +++ +R+L + F V+D +G RD++ ++ E
Sbjct: 1 MESLIGIKCRDFVLLAADASVARSIMVLKQDEQKIFKLSDSLAMAVAGESGDTVQFADYIAKNIQLFKMRNGYGLSPKAAANFTRKNLADSLRTRNAYRCDL-LLGGFDSHSKEPELYWVDYLGSLAKVPFAAHGYGGIFSMGVIDAAYRADMTVEEAHSLIRACVKEIRKRFLGNMPVFKCVVIDTNGIRDLSDVKVDE 199
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match: D2V0Q9_NAEGR (Proteasome subunit beta n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V0Q9_NAEGR) HSP 1 Score: 143 bits (361), Expect = 1.140e-38 Identity = 75/194 (38.66%), Postives = 127/194 (65.46%), Query Frame = 1 Query: 85 NTLMGVKGRDFVLLGGDSAFFRSVVIM-DTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEV-ACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 660
+T++G+KG+DF LL D+ S+++M DTE + + N+L+AA G+QGD FVE++ +N L +L + + + AHF R+ LA LR G Q I ++GG +++ +PEL+++D L ++Q+V +GAHG S F LS+LD +++GM+L+EA ++ C ++++R L+++ F +KVVDK G R+V
Sbjct: 3 DTVIGLKGKDFTLLAADTTASFSIILMKDTEDKITAVPNQNILIAAQGEQGDRVQFVEFITKNLNLYRLRNDTNLSVKASAHFVRQELAKALRS-GPYQTNI-MVGGVDDIEGAKPELYYIDYLSSMQEVKYGAHGYGSYFTLSILDKHYKDGMNLNEALIVLRMCVAEIQKRLLLNTPSFIVKVVDKYGSREV 194
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match: A0A8J1XMY1_OWEFU (Proteasome subunit beta n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XMY1_OWEFU) HSP 1 Score: 142 bits (359), Expect = 1.700e-38 Identity = 72/201 (35.82%), Postives = 125/201 (62.19%), Query Frame = 1 Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACIERGEE 684
M L+G+KG+DFV++ D+ RS+V M ++ K+ +LSD +++A SG+ GD F E++ +N +L ++ + + R A+F RRNLA+ LR + Q V L+GG++E P LF++D L AL + F AHG S F LSLLD +R+ ++ + A L+ C ++++R++V+ F ++ ++KDG D+ + G++
Sbjct: 1 MECLIGIKGKDFVIVASDTISARSIVSMKQDHDKMFKLSDKIVMACSGESGDTVQFAEYISKNIQLYKMRNGYELSPRAAANFTRRNLAEYLRSRTPYQ-VNMLIGGYDETD-GPSLFYMDYLAALIEAPFAAHGYGSFFVLSLLDRYYRDDVTQEGAIKLLHQCIDEVQKRFIVNLPTFKVRCINKDGITDLPDLRAGKQ 199
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match: A0A1Y1NKF7_PHOPY (Proteasome subunit beta n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1NKF7_PHOPY) HSP 1 Score: 142 bits (357), Expect = 3.700e-38 Identity = 69/196 (35.20%), Postives = 125/196 (63.78%), Query Frame = 1 Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACI 669
M L+G+K RDFV++ D S+++M T+ K+ LS+ +++A SG+QGD F E++ +N +L ++ + +GA+ A+F RRNLA+ LR + A V LL G+++ P+L+++D L +L +V F +HG F+L+++D + E ++ +EA +M+ C R++ +R +V+ F ++++DKDG RD+ I
Sbjct: 1 MECLLGIKCRDFVIVAADMTKAHSIMVMKTDENKLHTLSNKIVMAISGEQGDTTQFAEYIAKNIQLYKMRNGYELGAKAAANFTRRNLAEGLRSRNAYH-VNMLLAGYDDQE-GPQLYFVDYLASLANVKFASHGYGGFFSLAIMDRYYSEDLTPEEAYDIMKKCIREVHQRLIVNLPNFKLQIIDKDGIRDLPAI 194
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match: A0A284RK40_ARMOS (Proteasome subunit beta n=4 Tax=Physalacriaceae TaxID=862241 RepID=A0A284RK40_ARMOS) HSP 1 Score: 141 bits (355), Expect = 5.850e-38 Identity = 74/193 (38.34%), Postives = 115/193 (59.59%), Query Frame = 1 Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 660
M L + G+ +V++ D+ RS+V M + K+ LS ++L+A SG+ GD F E+++RN RL Q+ ++ P+G A + RR+LA+ LR + AV LLGG++ +P L+W+D LG + +V F AHG S F LSLLD SL+E ++ C ++ +R +VS + +KVVDKDG R+V
Sbjct: 1 MENLFAITGKGYVIVAADTTSARSIVKMKVDEDKIKVLSPHLLMAYSGEPGDTIQFAEYVERNIRLFQIRNTYPLGPSAAASWIRRSLAESLRSRKP-YAVNLLLGGYDTTKHEPHLYWVDYLGTMTEVPFAAHGYGSYFVLSLLDRYHNPEASLEEGLATLKRCIAEVAKRVVVSPGQYKVKVVDKDGSREV 192
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match: A0A4S8L3M7_DENBC (Proteasome subunit beta n=3 Tax=Agaricales TaxID=5338 RepID=A0A4S8L3M7_DENBC) HSP 1 Score: 140 bits (354), Expect = 8.250e-38 Identity = 75/193 (38.86%), Postives = 115/193 (59.59%), Query Frame = 1 Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 660
M T + G+ +V+L D+ RS+V M ++ K+ LS ++L+A SG+ GD F E+++RN RL Q+ ++ P+ A + RR+LAD LR + AV LLGG++ P L+W+D LG + ++ FGAHG S FALSLLD +L+E + C ++ +R +VS + +KVVDKDG R+V
Sbjct: 1 METSFAITGKGYVILAADTTSARSIVKMKSDEDKIKTLSPHLLMAYSGEPGDTIQFAEYIERNIRLYQIRNNYPLRPPAAASWIRRSLADSLRSRKP-YAVNLLLGGYDTTTYTPHLYWVDYLGTMTELPFGAHGYGSYFALSLLDRYHDPEATLEEGLATLRRCIDEVSKRLVVSPGKYKVKVVDKDGIREV 192
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match: A0A0C3PRE6_PHLGI (Proteasome subunit beta n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3PRE6_PHLGI) HSP 1 Score: 140 bits (354), Expect = 8.250e-38 Identity = 74/193 (38.34%), Postives = 114/193 (59.07%), Query Frame = 1 Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 660
M G+ G+ +VL+ D+ SV+ + + K++EL+ ++L+A SG+ GD F E+++RN RL Q+ +S P+ + A + R+ LA LR + +V LLGG++ P L+WLD LG L +V F AHG S FALSLLD SL+E ++ C ++ +R +VS F +KVVDKDG R++
Sbjct: 1 MEVSFGITGKGYVLVAADTTAAHSVIKVKNDVDKIIELNPHLLMAYSGEPGDTVQFAEYVERNIRLYQIRNSLPLRPPSAASWVRKTLAQSLRSRSP-YSVNLLLGGYDTSDYTPHLYWLDYLGTLVEVPFAAHGYGSYFALSLLDRYHDPEASLEEGIETLKRCIAEISKRLVVSPERFKVKVVDKDGVREI 192
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Match: F8NQX0_SERL9 (Proteasome subunit beta n=4 Tax=Agaricomycetidae TaxID=452333 RepID=F8NQX0_SERL9) HSP 1 Score: 140 bits (353), Expect = 1.160e-37 Identity = 75/193 (38.86%), Postives = 116/193 (60.10%), Query Frame = 1 Query: 82 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVIALLGGWNEVACQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDV 660
M T + G+ +V++ D+ RS+V M + K+ E+S ++L+A SG+ GD F E+++RN RL Q+ + P+ A + RR+LAD LR + +V L+GG++ +P+L+W+D LG DV FGAHG S FALSLLD SL+E ++ C ++ +R +VS + +KVVDKDG R+V
Sbjct: 1 METSFALTGKGYVIVAADTTAARSIVKMKVDEDKIKEISPHLLMAYSGEPGDTVQFAEFVERNIRLYQIRNLYPLRPSAAASWIRRSLADSLRSRSP-YSVNLLVGGYDTATHEPKLYWIDYLGTQVDVPFGAHGYGSYFALSLLDRYHDPEASLEEGLATLKRCVDEVAKRLVVSPGRYKVKVVDKDGVREV 192 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.704.1 >prot_Ecto-sp6_S_contig100.704.1 ID=prot_Ecto-sp6_S_contig100.704.1|Name=mRNA_Ecto-sp6_S_contig100.704.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=268bp MAASWGRILLQLALLCSSLISAVWASDMNTLMGVKGRDFVLLGGDSAFFRback to top mRNA from alignment at Ecto-sp6_S_contig100:172273..176973- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.704.1 ID=mRNA_Ecto-sp6_S_contig100.704.1|Name=mRNA_Ecto-sp6_S_contig100.704.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4701bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:172273..176973- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:172273..176973- >mRNA_Ecto-sp6_S_contig100.704.1 ID=mRNA_Ecto-sp6_S_contig100.704.1|Name=mRNA_Ecto-sp6_S_contig100.704.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=804bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:172273..176973- (Ectocarpus species6 EcLAC_371)back to top |