Homology
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match:
D7FKH9_ECTSI (1-alkyl-2-acetylglycerophosphocholine esterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH9_ECTSI)
HSP 1 Score: 1061 bits (2744), Expect = 0.000e+0
Identity = 565/655 (86.26%), Postives = 571/655 (87.18%), Query Frame = 3
Query: 66 MCLLGSKDDFAASPPWNLCKLSPRKCPPIWKCMLWSPLEILMVSTTIALGFAAAVALPTRLDIPVPGSMAALTQGVLTLLHVLVEGPRLQVLPVYLPTVLLAVGAATGRFGDSAGLLAAMGVATLGLASCSLLLCYHLPRVLPVGGRGPYAVGIATEHIRTPVAAAGDDAKSSPSEEELWPLELMAQVIYPLMKSMLALLFGLVCKECRCQLSFETYNYPRSIPHAKFCAIFCYRCCCGVDVPDTIHFFSDNATGPAQVFYPVEKSCVAKLPWFPSSIKRFRRSLCPATGEANRWPFGLTQMGVVGASIILGLEGSLLSDGAPSLGGLLRSAXXXXXXXXXXXXXTLSAAAALCLVCLVSDLRTGLSRSAYQTRYLDREQARCISKFSKMPGFFTEHLCGFYGAGFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAPDNHAFRLAQLRRRGREIELTRAHLARLARGSATDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDA 2030
MCL G KDDFAASPPWNLCKLSPRKCPPIWKCMLWSPLEIL+VSTTIALGFAAA ALPTRLDIPVPGSMAALTQGVLTLLHVLVEGPRLQVLPVYLPTVLLAVGAATG FGDSAGLLAAMGVATLGLASCSLLLCYHLPRVLPVGGRGPYAVGIATEHIRTPVAAAGD+AKSSPSEEELWPLELMAQV FYPVEKSCVAKLPWFPSSIKRFRRSLCPATGEANRWPFGLTQMGV+GASIILGLEGSLLSD APSLG LLRS XXXXXXXXXXXXX +SAAAALCLVCLVSDLRTGLSRSAYQTRYLDREQARCI+KFSKMPGFFTEHLCGFYG GFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVA+FLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAPDNHAFRLAQLRRRGREI LTRAHLARLARGSATDLE CRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGA MDPEETGYSMAFIMD WTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDA
Sbjct: 1 MCLHGIKDDFAASPPWNLCKLSPRKCPPIWKCMLWSPLEILLVSTTIALGFAAAAALPTRLDIPVPGSMAALTQGVLTLLHVLVEGPRLQVLPVYLPTVLLAVGAATGGFGDSAGLLAAMGVATLGLASCSLLLCYHLPRVLPVGGRGPYAVGIATEHIRTPVAAAGDNAKSSPSEEELWPLELMAQV-----------------------------------------------------------------------FYPVEKSCVAKLPWFPSSIKRFRRSLCPATGEANRWPFGLTQMGVIGASIILGLEGSLLSDSAPSLGDLLRSXXXXXXXXXXXXXXXVSAAAALCLVCLVSDLRTGLSRSAYQTRYLDREQARCIAKFSKMPGFFTEHLCGFYGPGFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAIFLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAPDNHAFRLAQLRRRGREIGLTRAHLARLARGSATDLETCRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAGMDPEETGYSMAFIMDGWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDA 584
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match:
D7FHV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV7_ECTSI)
HSP 1 Score: 201 bits (512), Expect = 7.850e-57
Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 3
Query: 2028 AGHTNFSDSPLFAPGPLRKLQGAGDIDCVIFIDQVTRLALCALKIFLRRRTSSGDAVKTPVPGDLGSVVLGEDLAVAFPEARVKRVCAGGVMPSPRTKRSSTVP 2339
AGHTNFSDSPLFAPGPLRKLQGAGDIDCVIFIDQVTRLALCAL+IFLRRRTSSGDA KTP PGDLGSVVLGEDLAVAFPEARVKRVCAGGVMPSPRTK SSTVP
Sbjct: 4 AGHTNFSDSPLFAPGPLRKLQGAGDIDCVIFIDQVTRLALCALEIFLRRRTSSGDAAKTPAPGDLGSVVLGEDLAVAFPEARVKRVCAGGVMPSPRTKISSTVP 107
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match:
A0A835YXZ7_9STRA (1-alkyl-2-acetylglycerophosphocholine esterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXZ7_9STRA)
HSP 1 Score: 147 bits (372), Expect = 6.720e-33
Identity = 177/684 (25.88%), Postives = 255/684 (37.28%), Query Frame = 3
Query: 471 YHLPRVLPVGGRGPYAVGIATEHIRTPVAAAGDDAKSSPSEEELWPLELMAQVIYPLMKSMLALLFGLVCKECRCQLSFETYNYPRSIPHAKFCAIFCYRCCCGVDVPDTIHFFSDNATGPAQVFYPVEKSCVAKLP-WFPSSIKRFRRSL-CPATGEANRWPFGLTQMGVVGASIILGLEGSLLSDGAPSLGGLLRSAXXXXXXXXXXXXXTLSAAAALCLVCLVSDLRTGLSRSAYQTRYLDR-EQARCISKFSKMPGFFTEHLCGFYGAGFESGHFHAPG---VPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQ-----------------------------------GYVAVFLEHNDGSGSSCMFPDGRITTYAKAPNLKDV-GAPDNHAFRLAQLRRRGREIELTRAHLARLA---RGSATDLEACRLV------GLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVR----DGANDLAIQL---------RVKDAGHTNFSDSPLF----APGPLRKLQGAGDIDCVIFID-QVTRLALCALKIFLRRRTSSGDAVKTPVPGDLGSVVLGEDLAVAFPEARVKRVCAGGVMPSPR 2315
++ R LP+ RGPYAV +HIRTPVA A P PLE+M Q +YPV + A P W+ ++ PA A RWP + VV A L S G +GG ++ AAAL C+++D+R L+R+A++ Y + ++KF+ MP H+ F+ + P FP AP A P+V+F HGLGGNRS+ + + A A+ GYV + +E NDG+ + P GR T Y P+ ++ G + +R AQL RR RE EL H LA G +D A V +D GHS+G TVL++L + E SR +D + A +MD WT P S+ ARA + +PLVV+T +GF A ++ E+ LV A V DG +Q+ R + T P A L +LQ +D ++T+LAL A ++ L+ + S VLGE A+ FP+A+V AGG + + R
Sbjct: 69 FYSVRYLPLATRGPYAVAAVLDHIRTPVAGAPPFNAPEPR-----PLEVMVQT-----------------------------------------------------------------------YYPVGAAPAAAAPRWWGLGVRSVINGRHMPALTLAQRWPLRHFVLSVVAALCQLVYVASRTEGGG--VGGY--------------GWWSVGWAAALVAACVLADVREALTRAAFKLPYFGGLKDTSAVAKFASMPPLVWSHVASMRDVAFDGAYVRCTADALAPAFPLAPCAAAAGGWPIVVFFHGLGGNRSLNSSYAAELASHSNSYPTFTTLSPYSYRSXXXXXXXXXXXXXXXXXXGYVVLCVESNDGTATLTTLPSGRSTYYTPCPHRPEIEGLGLDREWREAQLMRRMRECELVFGHAQALAGPVNGQKSDFTALASVLDPANGTSAQQLDASAIGLYGHSYGACTVLELLH-QSEALSR---VVDADR--IKAAVVMDPWTMPLSDAARAHATAVPLVVMTCEGFQYANNREREDALVAAAAARVAAAPADGPARAVLQINDCTQRWLFRCEAKRPTPRLQLPALPCARAAAALCQLQCTRMTHPPAALDARLTQLALSAFEVLLKGSREAHHV----------SAVLGEQAAL-FPQAKVTCAAAGGALAAHR 643
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match:
Q5M7T7_RAT (Platelet-activating factor acetylhydrolase n=6 Tax=Tetrapoda TaxID=32523 RepID=Q5M7T7_RAT)
HSP 1 Score: 101 bits (251), Expect = 1.240e-18
Identity = 97/331 (29.31%), Postives = 146/331 (44.11%), Query Frame = 3
Query: 1215 ISKFSKMPGFFTEHLCGFYGAGFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPN-----LKDVGAPDNHAFRLAQLRRRGREIELTRAHLARLARGSATDLEACRLVGLG-------DVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAE--GKKNEERLVDNAVRMVRDGANDLAIQLRVKDAGHTNFSDSPLFAPGPL--RKLQGAGDIDCVIFIDQVTRLALCALK 2159
+SKF P F L YG+ AP FP + GE K P++IFSHGLG R++Y+ GAA A+ G++ +EH DGS S+ + + + AK N LK + ++ R Q+R+R +E + + + G+ + ++GL D ID + A +GHSFGG TV Q LS+++ + +D W FP SEE ++ V PL I S F + K D +M+ +K + H NF+D F G + KL GDID + ID + +L L+
Sbjct: 106 LSKFLGTPTFVGNILRLLYGS------LTAPASWNFP---LRTGE-KYPLIIFSHGLGAFRTIYSAIGAALASYGFIVATVEHRDGSASATYYFEDQAA--AKMENRSWFYLKKIKQEESERARKEQVRQRAKECSKALSAILDIEHGNPKE----NVLGLPFDMKQLKDSIDETKIAVMGHSFGGATVFQALSEDQR---------------FRCGIALDPWMFPVSEELYSR-VPQPLFFINSAEFQTPKDIAKMKNFYQPDKERKMIT-----------IKGSVHQNFADGT-FVTGKIIGNKLSLKGDIDSRVAIDLTNKASLAFLQ 392
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match:
UPI0003F0DC0C (platelet-activating factor acetylhydrolase n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F0DC0C)
HSP 1 Score: 98.6 bits (244), Expect = 1.120e-17
Identity = 101/378 (26.72%), Postives = 164/378 (43.39%), Query Frame = 3
Query: 1215 ISKFSKMPGFFTEHLCGFYGAGFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRIT------TYAKAPNLKDVGAPDNHAFRLAQLRRRGREIELTRAHLARLARGSA------TDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQL-RVKDAGHTNFSDSPLFA---PGPLRKLQGAGDIDCVIFIDQVTRLALCALK--IFLRRRTSSGDAVKTPVPGDLGSVVLGEDLAVAFPEARVKRVCAG 2294
+SKF GF + L F+G+ +P +P+ GE K P+VIFSHGLG R++Y+ G A+ G++ +EH DGS S+ + + T+ + V + FR Q++RR +E + + L RG + TD + +L G ID + A +GHSFGG T +Q LS++R + +D W P EE ++ V PL I S+ F + N +M + ++D ++ +K + H NF D + G L KL+G DID + I + +L L+ + L+R D + + GD +++ G + + CAG
Sbjct: 107 LSKFLGTHGFMAKLLKLFFGS---------KTIPAKWNSPLRTGE-KYPLVIFSHGLGALRTIYSAIGNDLASYGFIVAVVEHRDGSASATYYFKDELAVTKDDKTWLYVQDHLPVNESEKKCFRNWQVKRRAQECSQALSLILDLDRGISVKNVLNTDFDMKQLKGS---IDRNKIAIIGHSFGGATTIQALSEDRR---------------FRCGIALDPWMQPLGEEVYSR-VQQPLFFINSEQF----------QYCANICKMKKLYSHDRERKMITIKGSVHQNFDDFTFTSGKITGHLFKLKG--DIDSTVAIRLCNKASLAFLQKHLGLKRDFDQWDPL---IEGDDANLINGTSIDTVCQLDSSLQDCAG 440
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match:
UPI00201FEBB5 (platelet-activating factor acetylhydrolase isoform X1 n=5 Tax=Arvicolinae TaxID=39087 RepID=UPI00201FEBB5)
HSP 1 Score: 96.7 bits (239), Expect = 4.610e-17
Identity = 91/342 (26.61%), Postives = 146/342 (42.69%), Query Frame = 3
Query: 1215 ISKFSKMPGFFTEHLCGFYGAGFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSS-------CMFPDGRITTY-------AKAPN-----LKDVGAPDNHAFRLAQLRRRGREIELTRAHLARLARGSA------TDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDAGHTNFSDSPLFAPGPL--RKLQGAGDIDCVIFIDQVTRLALCALK 2159
+SKF P F + L YG+ P +P+ GE K P+++FSHGLGG R++Y+ G A+ G++ +EH DGS S+ C Y AK N LK + + R Q+R+R +E + + +A G+ +D + +L G ID + A +GHSFGG TV+Q LS+++ + +D W +P SEE ++ PL I S F + ++ + + G I +R + H NF+D F G + KL G+ID + +D + + +L L+
Sbjct: 106 LSKFLGTPHFIGKFLNFLYGS---------MKTPASWNSPLRTGE-KYPLIVFSHGLGGFRTIYSAIGIGLASYGFIVAAVEHRDGSASATHNLICMCXXXXXXXXXYYFDDQMAAKTDNKSWLYLKMLKQEEEERVRKEQVRQRAKECSQALSAILDIAYGNPKENILDSDFDLEKLKG---AIDGDKIAVIGHSFGGATVIQTLSEDQR---------------FKCGIALDPWMYPVSEELHSKIFQ-PLFFINSAQF-------QSSKAIEKMKKFYQPGKERKMITIR--GSVHQNFADFT-FVTGKIIGNKLTLKGEIDSGVAMDLINKASLAFLQ 408
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match:
A0A5M6C7B7_9TREE (Putative phospholipase n=1 Tax=Kwoniella shandongensis TaxID=1734106 RepID=A0A5M6C7B7_9TREE)
HSP 1 Score: 95.9 bits (237), Expect = 7.510e-17
Identity = 89/276 (32.25%), Postives = 126/276 (45.65%), Query Frame = 3
Query: 1311 VPCFPAAPVARGEA-KRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSS-CMFP-------DGRITTYAKAPNLKDVGAPDNHA--FRLAQLRRRGREIELTRAHLARLARGSATDLEACRLVG---------LGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPC---SEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDAGHTNFSDSPLFAP 2069
+P +P AP+ K P+VIFSHGL G R Y+++ +A A++GYV + +EH DGSG + CM P + R+ Y K +L D FR QL R EI RL + +++ L G L +D + GHSFGGGT+L +LS S + P A +D W P S++ S PL+V+ S GF E + +RL+ +MV+ L + V AGH +FSD PL P
Sbjct: 117 MPVYPLAPLIPPPTHKYPLVIFSHGLAGTRHTYSQYCSALASEGYVVLAVEHRDGSGPAVCMPPQEGDKEDESRVMYYIKQTDLVWPSGEDKSLTHFRTLQLDLRTHEIYEAFYSFKRLLSEADENVKVEGLEGEKRKDWVGSLKGNVDWEELRLTGHSFGGGTLLHLLSTP----SPDSRHLPP--LPVKQAIALDPWLDPIPLPSDKLDPPSPLPPLLVLNSTGF--TEWSVHFDRLM----KMVKKAKGSL---ITVNGAGHQSFSDFPLLNP 377
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match:
PAFA_MOUSE (Platelet-activating factor acetylhydrolase n=10 Tax=Mus TaxID=862507 RepID=PAFA_MOUSE)
HSP 1 Score: 94.4 bits (233), Expect = 2.250e-16
Identity = 84/296 (28.38%), Postives = 138/296 (46.62%), Query Frame = 3
Query: 1329 APVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPN-----LKDVGAPDNHAFRLAQLRRRGREIELTRAHLARL----------ARGSATDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAE--GKKNEERLVDNAVRMVRDGANDLAIQLRVKDAGHTNFSDSPLFAPGPL--RKLQGAGDIDCVIFIDQVTRLALCALK 2159
+P+ GE K P+++FSHGLG R++Y+ G A+ G++ +EH D S S+ F + ++ AK N L+ V ++ + R Q+++R IE +RA A L GSA D++ + D ID + A +GHSFGG TVLQ LS+++ + +D W +P +EE ++++ PL+ I S F + K + D +M+ +K + H NF D F G + KL G+ID + ID + ++ L+
Sbjct: 135 SPLRTGE-KYPLIVFSHGLGAFRTIYSAIGIGLASNGFIVATVEHRDRSASATYFFEDQVA--AKVENRSWLYLRKVKQEESESVRKEQVQQRA--IECSRALSAILDIEHGDPKENVLGSAFDMKQLK-----DAIDETKIALMGHSFGGATVLQALSEDQR---------------FRCGVALDPWMYPVNEELYSRTLQ-PLLFINSAKFQTPKDIAKMKKFYQPDKERKMIT-----------IKGSVHQNFDDFT-FVTGKIIGNKLTLKGEIDSRVAIDLTNKASMAFLQ 392
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match:
A0A061IKF8_CRIGR (1-alkyl-2-acetylglycerophosphocholine esterase n=1 Tax=Cricetulus griseus TaxID=10029 RepID=A0A061IKF8_CRIGR)
HSP 1 Score: 91.3 bits (225), Expect = 5.350e-16
Identity = 89/333 (26.73%), Postives = 146/333 (43.84%), Query Frame = 3
Query: 1305 PGVPCFPAA---PVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPN-----LKDVGAPDNHAFRLAQLRRRGREIELTRAHLARLARGSATD------LEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDAGHTNFSDSPLFAPGPL--RKLQGAGDIDCVIFIDQVTRLALCALK--IFLRRRTSSGDAV-----KTPVPGDLGSVV 2234
PG PA+ P+ GE K P+VIFSHGLG R++Y+ G A+ G++ +EH DGS S+ + + ++ AK N LK + + R Q+++R +E + + + GS + + +L G ID + A GHSFGG TV+Q LS+++ + +D W +P SEE ++ + PL I S F + +R + +K + H NF+D F G + +L G+ID + ID + +L L+ + L + + D++ K +PG VV
Sbjct: 2 PGSMTTPASWNSPLRTGE-KYPLVIFSHGLGAFRTIYSAIGIGLASYGFIVATVEHRDGSASATYYFEDQVA--AKVENRTWLYLKMLKQEEEEKVRKQQVQQRAKECSQALSAILDIGHGSPKENILGSYFDVKQLEG---AIDEDKIAVFGHSFGGATVIQALSEDQR---------------FKCGVSLDPWMYPVSEELYSK-IPQPLFFINSAQFQSPKDIMKMKRFYQPGKERN---------MITIKGSVHQNFADFT-FVTGKIVGTRLTLKGEIDSGVAIDLTNKASLAFLQRHLGLHKDFNQWDSLVEGKNKNLIPGSPSDVV 302
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match:
PAFA_CAVPO (Platelet-activating factor acetylhydrolase n=2 Tax=Cavia porcellus TaxID=10141 RepID=PAFA_CAVPO)
HSP 1 Score: 92.4 bits (228), Expect = 9.190e-16
Identity = 84/300 (28.00%), Postives = 129/300 (43.00%), Query Frame = 3
Query: 1311 VPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMF--------PDGRITTYAKAPNLKDVGAPDNHAFRLAQLRRRGREIELTRAHLARLARG----SATDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDAGHTNFSDSPLFAPGPL--RKLQGAGDIDCVIFIDQVTRLALCALKIFL 2168
VP +P+ GE K P++IFSHGLG RS+Y+ G A+ G++ +EH D S ++ + R Y K NL+ R QLR+RG E + L + G + DL + L +D + A +GHSFGG TV+Q LS+++ + +D W FP E+ ++ + PL I S+ F A K E+ + VK + H NF D FA G + + L G ID + +D + + +L L+ +L
Sbjct: 130 VPAKWNSPLKTGE-KYPLIIFSHGLGAFRSIYSAIGIELASHGFIVAAVEHRDESAAATYYFQDAPAAESGNRSWIYYKVGNLETEE-------RKRQLRQRGEECSQALSWLLSIDEGEPVKNVLDLNF-DIQQLKGSLDRSKVAIIGHSFGGATVIQTLSEDQR---------------FRCGIALDPWMFPVGEDVHSK-IPQPLFFINSEYFQSANDTKKIEKFYQPQKERK---------MIAVKGSVHHNFVDFT-FATGKIIGQMLSLKGKIDSEVAMDLINKASLAFLQKYL 394
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 0.00e+0 / Id = 86.26 Expect = 7.85e-57 / Id = 96.15 Expect = 6.72e-33 / Id = 25.88 Expect = 1.24e-18 / Id = 29.31 Expect = 1.12e-17 / Id = 26.72 Expect = 4.61e-17 / Id = 26.61 Expect = 7.51e-17 / Id = 32.25 Expect = 2.25e-16 / Id = 28.38 Expect = 5.35e-16 / Id = 26.73 Expect = 9.19e-16 / Id = 28.00 Sequence D7FKH9_ECTSI D7FHV7_ECTSI A0A835YXZ7_9STRA Q5M7T7_RAT UPI0003F0DC0C UPI00201FEBB5 A0A5M6C7B7_9TREE PAFA_MOUSE A0A061IKF8_CRIGR PAFA_CAVPO Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 1062.4 Seed ortholog evalue 1e-307 Seed eggNOG ortholog 2880.D7FKH9 Preferred name PLA2G7 Model size 3812 KEGG rclass RC00037,RC00094 KEGG ko ko:K01062 KEGG Reaction R04452 KEGG Pathway ko00565,ko01100,ko01110,ko01130,map00565,map01100,map01110,map01130 Hectar predicted targeting category other localisation GOs GO:0002009,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003674,GO:0003824,GO:0003847,GO:0004620,GO:0004623,GO:0005488,GO:0005543,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006979,GO:0007275,GO:0007596,GO:0007599,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009395,GO:0009611,GO:0009653,GO:0009790,GO:0009888,GO:0009987,GO:0010941,GO:0012505,GO:0016020,GO:0016042,GO:0016043,GO:0016298,GO:0016331,GO:0016787,GO:0016788,GO:0017144,GO:0019637,GO:0030258,GO:0030334,GO:0030335,GO:0031347,GO:0031349,GO:0031984,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0032994,GO:0033554,GO:0034358,GO:0034362,GO:0034367,GO:0034368,GO:0034369,GO:0034374,GO:0034440,GO:0034441,GO:0034599,GO:0040012,GO:0040017,GO:0042060,GO:0042175,GO:0042221,GO:0042981,GO:0043062,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046434,GO:0046469,GO:0046486,GO:0047499,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048598,GO:0048729,GO:0048856,GO:0050727,GO:0050729,GO:0050789,GO:0050794,GO:0050817,GO:0050878,GO:0050896,GO:0050920,GO:0050921,GO:0051270,GO:0051272,GO:0051716,GO:0052689,GO:0055114,GO:0060429,GO:0060548,GO:0065007,GO:0065008,GO:0070887,GO:0071675,GO:0071677,GO:0071704,GO:0071825,GO:0071827,GO:0071840,GO:0080134,GO:0090025,GO:0090026,GO:0097006,GO:0097164,GO:0098827,GO:1901564,GO:1901575,GO:1990777,GO:2000145,GO:2000147 Exons 14 EggNOG free text desc. 1-alkyl-2-acetylglycerophosphocholine esterase activity EggNOG OGs COG4188@1,KOG3847@2759 Ec32 ortholog description Platelet-activating factor acetylhydrolase Ec32 ortholog Ec-12_002000.1 EC 3.1.1.47 Cds size 2277 COG Functional cat. B Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348721.004309-UTR-Ecto-sp6_S_contig100:93738..95208 1682348721.004309-UTR-Ecto-sp6_S_contig100:93738..95208 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig100 93739..95208 - 1682348721.1446912-UTR-Ecto-sp6_S_contig100:103759..103824 1682348721.1446912-UTR-Ecto-sp6_S_contig100:103759..103824 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig100 103760..103824 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348721.0170696-CDS-Ecto-sp6_S_contig100:95208..95421 1682348721.0170696-CDS-Ecto-sp6_S_contig100:95208..95421 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 95209..95421 - 1682348721.026614-CDS-Ecto-sp6_S_contig100:95778..95876 1682348721.026614-CDS-Ecto-sp6_S_contig100:95778..95876 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 95779..95876 - 1682348721.0359592-CDS-Ecto-sp6_S_contig100:96465..96601 1682348721.0359592-CDS-Ecto-sp6_S_contig100:96465..96601 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 96466..96601 - 1682348721.0451095-CDS-Ecto-sp6_S_contig100:97171..97363 1682348721.0451095-CDS-Ecto-sp6_S_contig100:97171..97363 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 97172..97363 - 1682348721.0540607-CDS-Ecto-sp6_S_contig100:97852..97985 1682348721.0540607-CDS-Ecto-sp6_S_contig100:97852..97985 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 97853..97985 - 1682348721.0631847-CDS-Ecto-sp6_S_contig100:98495..98629 1682348721.0631847-CDS-Ecto-sp6_S_contig100:98495..98629 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 98496..98629 - 1682348721.0724711-CDS-Ecto-sp6_S_contig100:99244..99390 1682348721.0724711-CDS-Ecto-sp6_S_contig100:99244..99390 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 99245..99390 - 1682348721.0820727-CDS-Ecto-sp6_S_contig100:99931..100035 1682348721.0820727-CDS-Ecto-sp6_S_contig100:99931..100035 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 99932..100035 - 1682348721.0911486-CDS-Ecto-sp6_S_contig100:100303..100521 1682348721.0911486-CDS-Ecto-sp6_S_contig100:100303..100521 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 100304..100521 - 1682348721.1006062-CDS-Ecto-sp6_S_contig100:100816..101318 1682348721.1006062-CDS-Ecto-sp6_S_contig100:100816..101318 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 100817..101318 - 1682348721.1095884-CDS-Ecto-sp6_S_contig100:101771..101909 1682348721.1095884-CDS-Ecto-sp6_S_contig100:101771..101909 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 101772..101909 - 1682348721.1182914-CDS-Ecto-sp6_S_contig100:102539..102579 1682348721.1182914-CDS-Ecto-sp6_S_contig100:102539..102579 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 102540..102579 - 1682348721.1267726-CDS-Ecto-sp6_S_contig100:103312..103409 1682348721.1267726-CDS-Ecto-sp6_S_contig100:103312..103409 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 103313..103409 - 1682348721.135599-CDS-Ecto-sp6_S_contig100:103633..103759 1682348721.135599-CDS-Ecto-sp6_S_contig100:103633..103759 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 103634..103759 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.694.1
>prot_Ecto-sp6_S_contig100.694.1 ID=prot_Ecto-sp6_S_contig100.694.1|Name=mRNA_Ecto-sp6_S_contig100.694.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=759bp
MCLLGSKDDFAASPPWNLCKLSPRKCPPIWKCMLWSPLEILMVSTTIALG back to top mRNA from alignment at Ecto-sp6_S_contig100:93739..103824-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.694.1 ID=mRNA_Ecto-sp6_S_contig100.694.1|Name=mRNA_Ecto-sp6_S_contig100.694.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=10086bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:93739..103824- (Ectocarpus species6 EcLAC_371)GCTCCGCCGCCCCCAACCAACACACCACGAGCCCTTCTCCACCCTTTTGT
CTATCGCGGCTTGTC ATGTGCCTTCTCGGGAGTAAGGATGACTTTGCTGC
CTCCCCGCCGTGGAACCTTTGCAAGCTCTCGCCAAGAAAGTGCCCCCCAA
TATGGAAGTGCATGCTGTGGAGCCCTCTTGAAATCCTCATG GTGAGCGAA
GTTACATGTAGTTTTTTGCTGGCCTGACGCTCAACAATGCCGCCGCTGCT
GTGTGTTTGCCTCTACCCTGCTGTGCTATACGCGGCAGCAGTGTGTTTGG
AGGCTGGCTGGGCATGCATTCTCGCCTTGGGTGTACTTCTGTAAGCACTG
CCATCATCGTGCTCTCTCTCTTGCCCATCGTGTCATGAATGTCTCCGCAC
GATGGATGACGACAGGTATCGACGACGATCGCTCTGGGCTTTGCAGCAGC
GGTGGCCTTACCAACGAGACTTGACATACCCGTTCCTGGAAGCATGGCTG
CGTTGACACAAG GTTTGTTCTGCGGTATCGATTTTCCATGCAAGGTTTGT
TCTGTGGTACGTGAACGGCTTCGGTTTTTCGCCGTGCACTGCCGGTTGCT
GTTGTTCGCCATCATCCCCGCGTGTACCGTCGCCGACAGCAGTAGATTCG
CTCCTGATACTTGTAGCAGGAAGGAAGCGCCGTTGTAGTTGTCGGTTGGC
GAGCCCTACATTTGAGTTTGAGTGCTGCAATGATCACGTATAGTGATCCC
GGCGACTGCGGCAATGGGTAATGATGTTCACGCAGAGCACTTTTGTACAT
GCCATGTGCTAGATACCGATTGGATACCGAACCGGCACAACAGACCACCT
GCCCAATCAGCGTAAACAACGCTCTAAACGGGTCTCAGTTCGGTCGAAGA
GAGCATGGACCGGAGTTCGCTCCTGCCAAAACTGGCGCAGCATATGCTGC
TTTCATATCCGATGCTCTGCAATCAACCGTGCTGCAGTCACCCGCCCGCG
TGCAAAGGATCTGCAAGTAGAGATGCATGCATCCTTTGTCTCTCTCTCTC
TCTCTCTCGCCCTCGCTCCCTCGTTTTCTTAGGCCTGGCGGTGGAAGCCG
CCGCAACCCCTTGTAGTACAATACAGTCCAGTTGGTTTAACAGGTTTGCT
TGGACTTGCATGAGGCTGTGCGCAGCACGATACCAAAGCGGCCAAGCTAA
CGTATACCACATACTTGTATCATGCGGTGCTCCTTGCGTGCCCAGGTGTG
CTGACCCTACTCCACGTCCTGGTAGAAGGCCCGAG GTAAGTACTGTATAG
CGTCGGGTTGGTGTTGACGCACAACTGCTGTGCACGTTTTGTTGTTGCGG
TGCAGAATGTCCACCATCCCGGTCACAAATGTCCACCATCCCGGTCACCG
TTTTTGAGGGCTTTGATGGAGAAGAACGACTAACAGTAGCAGCAGCTGTG
ACATGTGTACCTCGGCAGTAACACTTCTCAGGTGGTTCACGTCTTTGATG
GTTGTTCAGCGGTCAACACCAAATTGGCGTTTGGAGCGAGCCGTCGGCAC
CTTATATTACCCACAGCCGTATCAAATACGACCGTTGTGGGGCAATGAAG
AGCCAATGGGCCACAAGCAATGGAGTGCTGCTGCAGGCCGATCATACGAA
AAAAGCACTTTATACAAAAAGCATGGATGTTTAGCTGCGCAGCAACGACC
ATGCTGCGATGGTATCCGATACACAACAACCGAAAACTCTGATCTCTTCT
ACCCGTAGAGCTCCCGACGCTTGCCTGAAAGTCTGCCGCATCATTCAATA
GGGTATGGAAATAGGCAATAAGCATCGCCGCCGCAGTGTATTCCGTCGAC
CCGGTCTACTATGAGATACTGATCTTGGCTCGTTGCGCGACTACTCGAAC
CTTCCTCGATTCCAGGCTGCAGGTCCTTCCTGTCTACCTACCGACGGTGC
TTCTTGCCGTTGGCGCTGCGACCGGAAGGTTCGGCGACTCGGCGGGTCTG
CTGGCGGCGATGGGTGTCGCCACCCTGGGGCTAGCGTCATGTTCGCTTCT
CCT GTGAGTACCGCAGTTCCTCGCACTCAACTGCTGTTTTCCAAAGTTTG
CCGACCTACCCTCGTGTACTTATGCGAAACGTCCCTTGTCCGAACACTTA
ACGCTCGGTACCCCAATAGCTTGACAGGAAGAGAGACATCAGCATCTTGT
GCTGTCGAAGGTTTTCTGGAGACACATGTTTTAGTATTGGTTCTCCTACC
CGTACCGTAGAGCAACCGAGTGTGGAAAGCCAGTCCAGAAAGGTATGATG
TGGTTGGATCGTGTATAGTAGGTATGATGCATCATACAAGAGAACCGTGG
TGCGATCCTCAACACGTTGAGCAGTTTTTGCACGCCCTCCCTCACGCCAC
TGACGAATCTCCTCTGTATTTTTCTGACACGGTTTGTTGACAGCACGAGT
GACAGCCAGGCTCGCCACTGACTGTAGCCCTGCTCACTATCGACCATCAC
GCACAGGTGCTACCATTTGCCTCGGGTACTACCTGTTGGCGGGCGCGGGC
CTTACGCTGTGGGGATTGCGACTGAGCACATCCGCACACCTGTAGCCGCC
GCCGGGGACGACGCCAAGTCTTCTCCGAGCGAAGAGGAGCTGTGGCCTCT
GGAGCTCATGGCTCAGGTAATTTACCCTCTCATGAAAAGCATGCTGGCGC
TGCTGTTTGGCTTGGTTTGCAAAGAATGCCGCTGTCAGCTCTCGTTCGAA
ACATATAATTATCCACGCTCTATTCCACACGCCAAATTTTGCGCCATATT
CTGCTACCGCTGCTGTTGCGGGGTTGACGTGCCTGATACTATTCACTTTT
TTAGCGACAATGCGACCGGTCCGGCCCAGGTGTTCTATCCGGTGGAGAAA
TCTTGCGTGGCAAAGCTCCCGTGGTTCCCGTCAAGCATCAAGCGATTCCG
TCGGTCGCTCTGTCCTGCCACAGGAGAGGCTAACCGATGGCCTTTCGGCC
TGACTCAG GTATCTCCCCTTTTGACCCGACCTCTCAAGCGAGCGCCTGTC
ATTCCGTGGGGAGACTTGCGAATTGCCGCGGTTGTCTCGCTTCGTCTTAA
CGCGGGTGCTGCTGTTGAGCCGGCTGGCCGTTTCTCGTTGGACAACTTTG
CTACTGTGTATTGTAATGATGCGAGCTTCCCCGTACCAACAGGGGTGTAC
TCCGGTTAGAATCTGCCCAACGTATAGTGTAGCCCCTCCCCCGCCCCCAT
CAGACCTACATTCCGTCACACACTCCCCTGCCCCCCTCTCGAAACGGACA
CAGATGGGCGTGGTTGGGGCGAGCATAATTCTGGGGTTGGAGGGGTCCCT
TCTGTCGGACGGTGCCCCTTCCCTGGGAGGTCTGCTGCGGTCGGCGCCGT
CGTGGTCGTCCCTCGCTGGTAGCGCACAGGCGTGGACGCTATCGGCGGCG
GCGGCTTTGTGCTTGGTATGCCTGGTGTCCGACTTGCGCACGGGGCTTTC
TCGCTCGGCGTACCAGACCAG GTGCGCCGCGAAGCGCCCGAGGATAACAT
GCAATGCTGAGACAATTCCGTCGTACCTAGAGAGCTCTCCGGGACGATTG
CCACCACCTCTAGGTGTTCTTCACATGGCGTCGCTCGTGCAATGGTGTTT
TCGAGAGCAGCTGCCGGCGTGGTGTGTTTCGCGCGTTCAACCGCAGGAGG
CGTTTTGGTTGCTGCGGTTTACCCGAAACACACCGTAAGACCTGCTCGAA
ATGTTGATGCCGGTGCTGTACTGCTGGTGGTGGTCCCAGGTATCTCGACA
GAGAGCAGGCCAGGTGCATCTCCAAGTTTTCCAAGATGCCGGGTTTTTTC
ACCGAACACCTCTGCGGCTTCTACGGCGCTGGCTTCGAATCCG GTAAGCC
CGTACAGCAGAAGGGTACTCGCTACCGTAGCGAGACCGGCGCCGGGCTCC
GAATCGATCCGTTTAGGAGGACATTGTTGGATTTCCGACCAAGAAGTTGG
ACACGAACCGCACGCTCTCGGTTATTGCTGAGCACTTCAACAAACTAGGG
AGTACGCACCGCAACAGACGCACGGGATTTTTCTAGAGCCAGTTGTATCG
CTTGGTCGGAAGCATTTTTCTTCCGGGTACAGCGTGAAGTAAGCATCAGA
CGTGTGCGCCCGTCGGGTTCGTGACTTTTGAGTTACGTACTAGCGTAAAT
GGGATGACTCGATGTCAACTGTCCTTGATGTTGTGGGAGAGGTACGCTTC
TACTTTATGGCACTGACACTCGATACGCCATGCGGCGTGATCAACTTGGT
CCGGTGGTGGTTCGGGAGTCGACCATTATCTCTGCCGGCACTGTTGTACA
AAACAAGCCTCACTTGAATCTACGGTTTCTCTTGTCTTCTGTCGCCCCTC
GTGCTTAACTTCTCCCCTTTGGCACTGCTACTAGGACACTTTCACGCCCC
AGGCGTGCCGTGCTTTCCGGCAGCCCCGGTCGCCCGGGGTGAGGCCAAGC
GGCCGATGGTGATATTTTCGCACGGGCTCGGCGGGAACCGCTCCATGTAC
GCCGAACACGGCGCAGCGTATGCCGCCCAA GTGAGTGGCGAGGATTGGGC
TGGTGCAGCGCTACTTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGGGAGGGAGGGAGAGCTGACTCTCGTAGACA
ACAGCAGCTGTTGAGCACGCGTGCGCTTGTTCTGCGCACGTGTGTCGCAG
CTGTTTTACGTATCTCGTCTAGTCTGCTGCCCTGCTTGGCGATGGTTTTG
GCGCAGACGACTGGCCGTAGCGGGTGCATCTACCGTCCGAAGCGGGAGGT
CGAGCATGACGCCCCCGCTCCTGTAACATTGTCAGATGCATGCATATGGC
AGTGGTTGGTGTGGTTCCCTCTTTTCGTGATCCGTGTTTTTTCTATCTTA
GGACAAATTTCCCACTTGTCCAACTCGCATTTCTCCATCTCTTTTTCTAT
ATCTCTCTCCTCTGTAGTATGTCTCTCTGTCTGTCTCCTTCTCTATCTCT
ATCCCACTCTCTCTTTCTGCTTCTCTTCCTCTCTTGCTTCTTTTGTCGCC
CGCCACCTGGTCTACACGCGACTCATCGACTCATTTTTTTTTAACATCCC
GTTTTTTACACTACCGTCGACGGTTGCCAACCCCCCCAAACGAAGGGATA
CGTGGCTGTTTTCCTCGAGCACAACGACGGCTCGGGCTCCAGCTGCATGT
TCCCCGACGGGCGAATCACGACATACGCCAAAGCCCCAAACTTGAAGGAC
GTGGGCGCCCCGGACAACCACGCCTTCCG GTAACTCTGGTTTCCTCTCGT
CTCACACGATCTGCGCGTGTCCTTCTGCTCGTTTCACCTTTTCTTGTTCG
CGGGAAGGCATGGCTGGCATGATCCTCTTTCCTCTCTGAAGGTTATTTTC
GGCGAACATGCCGTAGTCAGGAGGGACCCGTTGAGGTCACCTAGGGCCTG
GGAAGTTGGCCTATGGTTGGCTCGAACCCCGCAGGTCAAGCGTCCCTGTT
GCCGTTTATTCGAAGCTGCTACCGGGGAGTCTAAGCGCCCTCTCTCATGT
TTGACCGGTTGAATCGGTCCTGCTCAAGGAGAAGGCGAAAAGGAACAAGT
CTAGGAGGCTCCTCTCCCTCTCTTTCTCCATCACGAGTACGATCAACGAT
GCCGCGACGTCTCGAATTTTAACGGCTATACATGTCGAACGGCGCCATAC
GAGTGGCACGCTGCCCACCGACCCCTTGCGGACAAGAAGGTAACCCCTTT
CCCCTTCCACCCTCCCTCTGCACACCCCACTATTTGTAGGCTGGCGCAAT
TGAGGCGCAGAGGAAGGGAAATTGAGCTCACGAGGGCCCACCTGGCAAGG
CTCGCCCGCGGCTCTGCAACAGACTTGGAGGCCTGTCGACTTGTCGGGTT
AGGGGATGTCATCGACACCAAG GTCCGGTTGTCGGGGGGCGTTGCTCGAT
TTCGCTTTGACTCGGTGCATTGGGTTGTGCGTGTGTACACCCCGTTGTTT
TCCAATTGAAAACGACGCGGTTTGTTATGCTCGAGCTTGGGTTTTGAGGT
AGCTGGGGTTTGGGTTTCTGTTTTGTCTCGTTCTTTGGGAGGCAATGGAG
GTGTCATCGTTTGCGCCCTCACAAAGTAGCGTATATGGGACATGTGTTCC
CGAAGGTAACGTTTTTGCATGGACACAGGCCGACTTATGGGTTGCCGGCG
CCACAAACAAGGGGGGCTTGCCTGTAGCCGCTGCGCCTGCCAGCTCAACG
GTGACTAGACAGCATTGGAGACATTATTTCTACGCTATCGGCAAGGCCGC
CCTTCCAACAGTTCTCACATGCTAGCATGGACAGATATCACCTTAAAGTC
ACCGACCTTGACCCCCCCCCCGCCTCGCTGCCATCCGCGTGTCCACAACT
TTTCTCGCCAGCGGCCGGCCTTCGTAGGGCACTCGTTCGGAGGGGGCACG
GTTCTGCAGGTGCTGAGCGACGAGCGTGAGCGCGGCTCGAGAGGTGGCGC
GGAGATGGACCCCGAGGAGACCGGCTACTCGATGGCCTTCATCATGGACG
CTTGGACGTTCCCCTGCAGCGAAGAAGCGCGCGCCCAGAGCGTCGACATT
CCG GTGCGTGGTTGTGGTGGTGGCGGAGGAGGCGTGGGAAGGGAGGCTCA
CGCGACGCCTGTTATGGAGGCGTTTTCCTGTGTCCCGTGGTGTGGTGTAC
TCAAACGGTGGTGGTGGCTGCGTCTTTATTGGCTGCTACAACAACGCTAG
ACTGCTTTCGTTGGACTCATTTAGATCCTATGCATACATGAAGGTGCGCC
GGTTGCTATTTCGCATTTCTCATTCGTTCGCTCCCATTCGCAAGAGTTAG
AAGTAATTTCGGAATAGATAGGGATATCCCCTTTTTTCTCCCCACGGACG
CCACATCTCATCGAGTCAGCCCACAGCATAGTGTGTGATCAATGACGCCT
TCCGATTGTCCATGGTAAACCCGACAGCACTTTTGCAGTTCCCTGAAGAA
ATGCTGACGTTCCAGCAAGAACGCGAGCGCACCAACCATATGTCGAAGGC
TCGGGTACGTGGGCAAACACAACTGGACACTGCTGCTACTTGCTGTCGTT
GTGTCCACGTATTTTTATCATCCGTTCAACGCGTGTCCTCTTGTGGCGCT
CCTTTCCTGCCCGCTCTACGCAGTTGGTTGTCATCACCAGTGACGGCTTT
CTTGGGGCCGAGGGTAAGAAGAACGAGGAACGCCTCGTCGACAACGCCGT
CCGCATGGTTCGCGATGGCGCCAACGACCTCGCCATCCAGCTCCGAGTCA
AAGACGCCG GTGAGGCTCAAGGGGGACTTTGTATTTTCGTCTTGTATGGT
TCTTTGTGTGTGTTGTATGTTTGTCTTGTTTTTGTGTTGTGTGTGCTTTT
TTTTTTTTGTACTTTGTGAAGTATAATTTGTATGTGTTGTTTTGCAAGCA
CATGTCTTGCACGGAGTTGCGTATGTGTTTTCGTGTTGTTCGTGACGTGT
GTCTGCCGGATAATGGGGGTATACACAACGATCGTTGAGCGATGATCGGT
GCAGTTCAAGAGCGGCCGGGTGCTCGTCTACCCTCGCGTGCGACAGTACC
AGCCCTAGGCGTCGCTTCCAGACATGTTTTCGGTAGGCAATCGCCAAACT
AAAACCTGTTTGTTCCTAGCGAATGTGTGATTCATCGTGCAGTATCAGTC
GATTAAGCTCGAAAACCAGCTCCTACGTGCTGCTGCTGTCACCCCCCCCA
CACACGCACCCTCTTACTTGTTTTCCGCTTGTCGCCTGTTGGTGTTTGTT
GTTGTTTCTGTTGCGTTCAAAAAACAATCTTCCTCACCTCTTCCCTCCTC
TTCAAGGATTCCTCTCTTCCGTACCGCATGTTTCGATGGTTTGTGCAGGC
CACACCAACTTTTCGGACTCTCCCCTGTTCGCCCCCGGACCGTTGCGGAA
GCTACAGGGCGCCGGGGACATAGATTGTGTCATTTTCATTGACCAG GTGA
GGCCTGTGCTGCTGACAGCAGTGGGTGCAGGGGCGCGTAATGAAAGCTAT
GCGTTGCCACGGGAGAACGGCTACAGGACCGGTTGACTGTCGTGAGGGTG
GGCTGTTTCGATGCGAGCGAAAACGTCGGTGTTGGGTGCGCCGGCGCATC
TTTTGTTCCTAACTGGTTTGAGGTGCATTGGCCTTGACCCCAGCAGGCGT
GGTTTTTTTCTCACCCTCGAAATTCGCAACACTTTCCCGACGGCCCCTCA
CAGCCCCCGATAGCGGGGCAACGCCAACGGAACGACACACGCAATGAAAA
ACGGACGGGCGCCCCAACAACAGAATTTCGGTGCCCCTCGCCCCTGGTCA
CAGGTGACCCGCCTGGCGCTCTGCGCCCTCAAGATCTTCCTCCGGAGGCG
GACCAGCTCGGGGGACGCGGTGAAGACGCCAGTGCCGGGTGACCTAGGGT
CGGTGGTGCTCGGCGAAGACTTGGCCGTCGCTTTCCCCGAGGCCCGGGTG
AAGAGAGTGTGCGCGGGGGGCGTGATGCCCTCCCCGCGCACGAAAAGAAG
CAGCACGGTGCCCTAG AAGAGGGTTTGTAGAGAGCACGACGCCGGGCTGG
ACGGTAGATAGAGCGCCTTTGCACGGAGAATGGTGGGTGAAATTCCTCAC
TTTTGTGGCAGAAAAAAAGCGTGTAAATGGTCGTGTTTCCTCTCTCTCAA
ACAGGTGTAATAACCATGTGTGTGTAGCTCACGTTTCGTGTGAAGATTTT
TTGTCCCTGTCCCTGTCCCTGTTAACTATGAATGTGGTGACGTGTCCAAC
GCGCCACCGAGCACATTCTGCATTCTCTAAACATCCCCGAGGCATGCAAC
TGCTGGGTCCACCATTATTGCTGGCGCGTGTCTCGTCCTTTTGCCCTGTT
GTCGAGGGTAGCCTTGCCTCACCCATAGAACTAGCGAGCAGTACAATAGT
TCGCCAGAGGCACGAGCGGTATAGGTGATTTTGCCAACCCTTTGAGAGGT
CTGCGCTGTGCTATGTGAGCCCAACCCTGAGGGTTGTTGTTTGCACTGAG
CTCAACAGCACCGTGCGACAAAGGAGTAAACGCTGGACGGACATGCAGAC
GAGCATCGACAAAGTTGACTTTATTTTGATGGCCAAGGTTGTGGAACTAG
TGATGTGACGCCTAAGTAGATCCATATGTCAGGTCACGGTGGTGTATGTA
TTACGAGGTCATCAAAACCGAAGGCCTTCAGTCCAAACACCGCCACGCAA
AAAAAAGTGTCGAAAAAGGCGTGGGAAATGAGGGCTACTGAGAAACGAAA
AAAGGTTGCCGTGACTTTGTTCGATTCAAAGACGAGTGAGCGGCAGGGTG
TCCTACCGCACATGAGTGGGCAGTAAGGCGTTAACGTTAAATGCGACTTG
AAACAACGTCATCGTGCCGCTATAGGGGGGACGCTAGTAGCAGTGCGTCT
CCCATGAGTGGAAGGCCCCTGAAAAGCCCACCGCGGTAGTTGACTCCAGC
CCCAAATCTAGCACCTTCGGACACGCACGCGTGCGCACACACGACAGGCA
GCAGCAGCAGGAGTAAGGGGAGGGCGAAGACAACGGTCATGTTTGACGGG
GGGATGTTGGCGTGGCATTTTTGACAAAACCGAGTCACCGAACAAACTCG
GTCATAACCTTGGCGTTGAGGGGCGAGAGGAAACGGAAGCATTCACCCTA
TATGGGAAACACACAATCATTCAGACAGACAGGTAGCATGAGACGGAAAT
AGGATATCATCCAGCGGACTAGTGCGTGCATCACAGAGCACGAGTAGATC
AGACAACACTAATTTTAGGGGGTCTACCGCGGGGAGAAAAATACTTTCTG
ATGACGTTTTTCTTCTCTCGAGGTCTCGTCGGCGAGTACTTGTGTGTCAT
GGGATTGAAGGCACATATCATGACGTGGAGTGAAAGCTGCCGGCTGCAGA
GTTTTTTTCTTTGGATATCAGCTGTCTCCGAGAAAAAGAAGACTGGTTCA
AATATCGGGGGTCAAACGTTTTGTGTGGTACAAGTG back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:93739..103824-
>mRNA_Ecto-sp6_S_contig100.694.1 ID=mRNA_Ecto-sp6_S_contig100.694.1|Name=mRNA_Ecto-sp6_S_contig100.694.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2277bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:93739..103824- (Ectocarpus species6 EcLAC_371) back to top