mRNA_Ecto-sp6_S_contig100.694.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match: D7FKH9_ECTSI (1-alkyl-2-acetylglycerophosphocholine esterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH9_ECTSI) HSP 1 Score: 1061 bits (2744), Expect = 0.000e+0 Identity = 565/655 (86.26%), Postives = 571/655 (87.18%), Query Frame = 3 Query: 66 MCLLGSKDDFAASPPWNLCKLSPRKCPPIWKCMLWSPLEILMVSTTIALGFAAAVALPTRLDIPVPGSMAALTQGVLTLLHVLVEGPRLQVLPVYLPTVLLAVGAATGRFGDSAGLLAAMGVATLGLASCSLLLCYHLPRVLPVGGRGPYAVGIATEHIRTPVAAAGDDAKSSPSEEELWPLELMAQVIYPLMKSMLALLFGLVCKECRCQLSFETYNYPRSIPHAKFCAIFCYRCCCGVDVPDTIHFFSDNATGPAQVFYPVEKSCVAKLPWFPSSIKRFRRSLCPATGEANRWPFGLTQMGVVGASIILGLEGSLLSDGAPSLGGLLRSAXXXXXXXXXXXXXTLSAAAALCLVCLVSDLRTGLSRSAYQTRYLDREQARCISKFSKMPGFFTEHLCGFYGAGFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAPDNHAFRLAQLRRRGREIELTRAHLARLARGSATDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDA 2030
MCL G KDDFAASPPWNLCKLSPRKCPPIWKCMLWSPLEIL+VSTTIALGFAAA ALPTRLDIPVPGSMAALTQGVLTLLHVLVEGPRLQVLPVYLPTVLLAVGAATG FGDSAGLLAAMGVATLGLASCSLLLCYHLPRVLPVGGRGPYAVGIATEHIRTPVAAAGD+AKSSPSEEELWPLELMAQV FYPVEKSCVAKLPWFPSSIKRFRRSLCPATGEANRWPFGLTQMGV+GASIILGLEGSLLSD APSLG LLRS XXXXXXXXXXXXX +SAAAALCLVCLVSDLRTGLSRSAYQTRYLDREQARCI+KFSKMPGFFTEHLCGFYG GFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVA+FLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAPDNHAFRLAQLRRRGREI LTRAHLARLARGSATDLE CRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGA MDPEETGYSMAFIMD WTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDA
Sbjct: 1 MCLHGIKDDFAASPPWNLCKLSPRKCPPIWKCMLWSPLEILLVSTTIALGFAAAAALPTRLDIPVPGSMAALTQGVLTLLHVLVEGPRLQVLPVYLPTVLLAVGAATGGFGDSAGLLAAMGVATLGLASCSLLLCYHLPRVLPVGGRGPYAVGIATEHIRTPVAAAGDNAKSSPSEEELWPLELMAQV-----------------------------------------------------------------------FYPVEKSCVAKLPWFPSSIKRFRRSLCPATGEANRWPFGLTQMGVIGASIILGLEGSLLSDSAPSLGDLLRSXXXXXXXXXXXXXXXVSAAAALCLVCLVSDLRTGLSRSAYQTRYLDREQARCIAKFSKMPGFFTEHLCGFYGPGFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAIFLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAPDNHAFRLAQLRRRGREIGLTRAHLARLARGSATDLETCRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAGMDPEETGYSMAFIMDGWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDA 584
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match: D7FHV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV7_ECTSI) HSP 1 Score: 201 bits (512), Expect = 7.850e-57 Identity = 100/104 (96.15%), Postives = 101/104 (97.12%), Query Frame = 3 Query: 2028 AGHTNFSDSPLFAPGPLRKLQGAGDIDCVIFIDQVTRLALCALKIFLRRRTSSGDAVKTPVPGDLGSVVLGEDLAVAFPEARVKRVCAGGVMPSPRTKRSSTVP 2339
AGHTNFSDSPLFAPGPLRKLQGAGDIDCVIFIDQVTRLALCAL+IFLRRRTSSGDA KTP PGDLGSVVLGEDLAVAFPEARVKRVCAGGVMPSPRTK SSTVP
Sbjct: 4 AGHTNFSDSPLFAPGPLRKLQGAGDIDCVIFIDQVTRLALCALEIFLRRRTSSGDAAKTPAPGDLGSVVLGEDLAVAFPEARVKRVCAGGVMPSPRTKISSTVP 107
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match: A0A835YXZ7_9STRA (1-alkyl-2-acetylglycerophosphocholine esterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXZ7_9STRA) HSP 1 Score: 147 bits (372), Expect = 6.720e-33 Identity = 177/684 (25.88%), Postives = 255/684 (37.28%), Query Frame = 3 Query: 471 YHLPRVLPVGGRGPYAVGIATEHIRTPVAAAGDDAKSSPSEEELWPLELMAQVIYPLMKSMLALLFGLVCKECRCQLSFETYNYPRSIPHAKFCAIFCYRCCCGVDVPDTIHFFSDNATGPAQVFYPVEKSCVAKLP-WFPSSIKRFRRSL-CPATGEANRWPFGLTQMGVVGASIILGLEGSLLSDGAPSLGGLLRSAXXXXXXXXXXXXXTLSAAAALCLVCLVSDLRTGLSRSAYQTRYLDR-EQARCISKFSKMPGFFTEHLCGFYGAGFESGHFHAPG---VPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQ-----------------------------------GYVAVFLEHNDGSGSSCMFPDGRITTYAKAPNLKDV-GAPDNHAFRLAQLRRRGREIELTRAHLARLA---RGSATDLEACRLV------GLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVR----DGANDLAIQL---------RVKDAGHTNFSDSPLF----APGPLRKLQGAGDIDCVIFID-QVTRLALCALKIFLRRRTSSGDAVKTPVPGDLGSVVLGEDLAVAFPEARVKRVCAGGVMPSPR 2315
++ R LP+ RGPYAV +HIRTPVA A P PLE+M Q +YPV + A P W+ ++ PA A RWP + VV A L S G +GG ++ AAAL C+++D+R L+R+A++ Y + ++KF+ MP H+ F+ + P FP AP A P+V+F HGLGGNRS+ + + A A+ GYV + +E NDG+ + P GR T Y P+ ++ G + +R AQL RR RE EL H LA G +D A V +D GHS+G TVL++L + E SR +D + A +MD WT P S+ ARA + +PLVV+T +GF A ++ E+ LV A V DG +Q+ R + T P A L +LQ +D ++T+LAL A ++ L+ + S VLGE A+ FP+A+V AGG + + R
Sbjct: 69 FYSVRYLPLATRGPYAVAAVLDHIRTPVAGAPPFNAPEPR-----PLEVMVQT-----------------------------------------------------------------------YYPVGAAPAAAAPRWWGLGVRSVINGRHMPALTLAQRWPLRHFVLSVVAALCQLVYVASRTEGGG--VGGY--------------GWWSVGWAAALVAACVLADVREALTRAAFKLPYFGGLKDTSAVAKFASMPPLVWSHVASMRDVAFDGAYVRCTADALAPAFPLAPCAAAAGGWPIVVFFHGLGGNRSLNSSYAAELASHSNSYPTFTTLSPYSYRSXXXXXXXXXXXXXXXXXXGYVVLCVESNDGTATLTTLPSGRSTYYTPCPHRPEIEGLGLDREWREAQLMRRMRECELVFGHAQALAGPVNGQKSDFTALASVLDPANGTSAQQLDASAIGLYGHSYGACTVLELLH-QSEALSR---VVDADR--IKAAVVMDPWTMPLSDAARAHATAVPLVVMTCEGFQYANNREREDALVAAAAARVAAAPADGPARAVLQINDCTQRWLFRCEAKRPTPRLQLPALPCARAAAALCQLQCTRMTHPPAALDARLTQLALSAFEVLLKGSREAHHV----------SAVLGEQAAL-FPQAKVTCAAAGGALAAHR 643
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match: Q5M7T7_RAT (Platelet-activating factor acetylhydrolase n=6 Tax=Tetrapoda TaxID=32523 RepID=Q5M7T7_RAT) HSP 1 Score: 101 bits (251), Expect = 1.240e-18 Identity = 97/331 (29.31%), Postives = 146/331 (44.11%), Query Frame = 3 Query: 1215 ISKFSKMPGFFTEHLCGFYGAGFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPN-----LKDVGAPDNHAFRLAQLRRRGREIELTRAHLARLARGSATDLEACRLVGLG-------DVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAE--GKKNEERLVDNAVRMVRDGANDLAIQLRVKDAGHTNFSDSPLFAPGPL--RKLQGAGDIDCVIFIDQVTRLALCALK 2159
+SKF P F L YG+ AP FP + GE K P++IFSHGLG R++Y+ GAA A+ G++ +EH DGS S+ + + + AK N LK + ++ R Q+R+R +E + + + G+ + ++GL D ID + A +GHSFGG TV Q LS+++ + +D W FP SEE ++ V PL I S F + K D +M+ +K + H NF+D F G + KL GDID + ID + +L L+
Sbjct: 106 LSKFLGTPTFVGNILRLLYGS------LTAPASWNFP---LRTGE-KYPLIIFSHGLGAFRTIYSAIGAALASYGFIVATVEHRDGSASATYYFEDQAA--AKMENRSWFYLKKIKQEESERARKEQVRQRAKECSKALSAILDIEHGNPKE----NVLGLPFDMKQLKDSIDETKIAVMGHSFGGATVFQALSEDQR---------------FRCGIALDPWMFPVSEELYSR-VPQPLFFINSAEFQTPKDIAKMKNFYQPDKERKMIT-----------IKGSVHQNFADGT-FVTGKIIGNKLSLKGDIDSRVAIDLTNKASLAFLQ 392
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match: UPI0003F0DC0C (platelet-activating factor acetylhydrolase n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F0DC0C) HSP 1 Score: 98.6 bits (244), Expect = 1.120e-17 Identity = 101/378 (26.72%), Postives = 164/378 (43.39%), Query Frame = 3 Query: 1215 ISKFSKMPGFFTEHLCGFYGAGFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRIT------TYAKAPNLKDVGAPDNHAFRLAQLRRRGREIELTRAHLARLARGSA------TDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQL-RVKDAGHTNFSDSPLFA---PGPLRKLQGAGDIDCVIFIDQVTRLALCALK--IFLRRRTSSGDAVKTPVPGDLGSVVLGEDLAVAFPEARVKRVCAG 2294
+SKF GF + L F+G+ +P +P+ GE K P+VIFSHGLG R++Y+ G A+ G++ +EH DGS S+ + + T+ + V + FR Q++RR +E + + L RG + TD + +L G ID + A +GHSFGG T +Q LS++R + +D W P EE ++ V PL I S+ F + N +M + ++D ++ +K + H NF D + G L KL+G DID + I + +L L+ + L+R D + + GD +++ G + + CAG
Sbjct: 107 LSKFLGTHGFMAKLLKLFFGS---------KTIPAKWNSPLRTGE-KYPLVIFSHGLGALRTIYSAIGNDLASYGFIVAVVEHRDGSASATYYFKDELAVTKDDKTWLYVQDHLPVNESEKKCFRNWQVKRRAQECSQALSLILDLDRGISVKNVLNTDFDMKQLKGS---IDRNKIAIIGHSFGGATTIQALSEDRR---------------FRCGIALDPWMQPLGEEVYSR-VQQPLFFINSEQF----------QYCANICKMKKLYSHDRERKMITIKGSVHQNFDDFTFTSGKITGHLFKLKG--DIDSTVAIRLCNKASLAFLQKHLGLKRDFDQWDPL---IEGDDANLINGTSIDTVCQLDSSLQDCAG 440
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match: UPI00201FEBB5 (platelet-activating factor acetylhydrolase isoform X1 n=5 Tax=Arvicolinae TaxID=39087 RepID=UPI00201FEBB5) HSP 1 Score: 96.7 bits (239), Expect = 4.610e-17 Identity = 91/342 (26.61%), Postives = 146/342 (42.69%), Query Frame = 3 Query: 1215 ISKFSKMPGFFTEHLCGFYGAGFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSS-------CMFPDGRITTY-------AKAPN-----LKDVGAPDNHAFRLAQLRRRGREIELTRAHLARLARGSA------TDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDAGHTNFSDSPLFAPGPL--RKLQGAGDIDCVIFIDQVTRLALCALK 2159
+SKF P F + L YG+ P +P+ GE K P+++FSHGLGG R++Y+ G A+ G++ +EH DGS S+ C Y AK N LK + + R Q+R+R +E + + +A G+ +D + +L G ID + A +GHSFGG TV+Q LS+++ + +D W +P SEE ++ PL I S F + ++ + + G I +R + H NF+D F G + KL G+ID + +D + + +L L+
Sbjct: 106 LSKFLGTPHFIGKFLNFLYGS---------MKTPASWNSPLRTGE-KYPLIVFSHGLGGFRTIYSAIGIGLASYGFIVAAVEHRDGSASATHNLICMCXXXXXXXXXYYFDDQMAAKTDNKSWLYLKMLKQEEEERVRKEQVRQRAKECSQALSAILDIAYGNPKENILDSDFDLEKLKG---AIDGDKIAVIGHSFGGATVIQTLSEDQR---------------FKCGIALDPWMYPVSEELHSKIFQ-PLFFINSAQF-------QSSKAIEKMKKFYQPGKERKMITIR--GSVHQNFADFT-FVTGKIIGNKLTLKGEIDSGVAMDLINKASLAFLQ 408
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match: A0A5M6C7B7_9TREE (Putative phospholipase n=1 Tax=Kwoniella shandongensis TaxID=1734106 RepID=A0A5M6C7B7_9TREE) HSP 1 Score: 95.9 bits (237), Expect = 7.510e-17 Identity = 89/276 (32.25%), Postives = 126/276 (45.65%), Query Frame = 3 Query: 1311 VPCFPAAPVARGEA-KRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSS-CMFP-------DGRITTYAKAPNLKDVGAPDNHA--FRLAQLRRRGREIELTRAHLARLARGSATDLEACRLVG---------LGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPC---SEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDAGHTNFSDSPLFAP 2069
+P +P AP+ K P+VIFSHGL G R Y+++ +A A++GYV + +EH DGSG + CM P + R+ Y K +L D FR QL R EI RL + +++ L G L +D + GHSFGGGT+L +LS S + P A +D W P S++ S PL+V+ S GF E + +RL+ +MV+ L + V AGH +FSD PL P
Sbjct: 117 MPVYPLAPLIPPPTHKYPLVIFSHGLAGTRHTYSQYCSALASEGYVVLAVEHRDGSGPAVCMPPQEGDKEDESRVMYYIKQTDLVWPSGEDKSLTHFRTLQLDLRTHEIYEAFYSFKRLLSEADENVKVEGLEGEKRKDWVGSLKGNVDWEELRLTGHSFGGGTLLHLLSTP----SPDSRHLPP--LPVKQAIALDPWLDPIPLPSDKLDPPSPLPPLLVLNSTGF--TEWSVHFDRLM----KMVKKAKGSL---ITVNGAGHQSFSDFPLLNP 377
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match: PAFA_MOUSE (Platelet-activating factor acetylhydrolase n=10 Tax=Mus TaxID=862507 RepID=PAFA_MOUSE) HSP 1 Score: 94.4 bits (233), Expect = 2.250e-16 Identity = 84/296 (28.38%), Postives = 138/296 (46.62%), Query Frame = 3 Query: 1329 APVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPN-----LKDVGAPDNHAFRLAQLRRRGREIELTRAHLARL----------ARGSATDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAE--GKKNEERLVDNAVRMVRDGANDLAIQLRVKDAGHTNFSDSPLFAPGPL--RKLQGAGDIDCVIFIDQVTRLALCALK 2159
+P+ GE K P+++FSHGLG R++Y+ G A+ G++ +EH D S S+ F + ++ AK N L+ V ++ + R Q+++R IE +RA A L GSA D++ + D ID + A +GHSFGG TVLQ LS+++ + +D W +P +EE ++++ PL+ I S F + K + D +M+ +K + H NF D F G + KL G+ID + ID + ++ L+
Sbjct: 135 SPLRTGE-KYPLIVFSHGLGAFRTIYSAIGIGLASNGFIVATVEHRDRSASATYFFEDQVA--AKVENRSWLYLRKVKQEESESVRKEQVQQRA--IECSRALSAILDIEHGDPKENVLGSAFDMKQLK-----DAIDETKIALMGHSFGGATVLQALSEDQR---------------FRCGVALDPWMYPVNEELYSRTLQ-PLLFINSAKFQTPKDIAKMKKFYQPDKERKMIT-----------IKGSVHQNFDDFT-FVTGKIIGNKLTLKGEIDSRVAIDLTNKASMAFLQ 392
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match: A0A061IKF8_CRIGR (1-alkyl-2-acetylglycerophosphocholine esterase n=1 Tax=Cricetulus griseus TaxID=10029 RepID=A0A061IKF8_CRIGR) HSP 1 Score: 91.3 bits (225), Expect = 5.350e-16 Identity = 89/333 (26.73%), Postives = 146/333 (43.84%), Query Frame = 3 Query: 1305 PGVPCFPAA---PVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPN-----LKDVGAPDNHAFRLAQLRRRGREIELTRAHLARLARGSATD------LEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDAGHTNFSDSPLFAPGPL--RKLQGAGDIDCVIFIDQVTRLALCALK--IFLRRRTSSGDAV-----KTPVPGDLGSVV 2234
PG PA+ P+ GE K P+VIFSHGLG R++Y+ G A+ G++ +EH DGS S+ + + ++ AK N LK + + R Q+++R +E + + + GS + + +L G ID + A GHSFGG TV+Q LS+++ + +D W +P SEE ++ + PL I S F + +R + +K + H NF+D F G + +L G+ID + ID + +L L+ + L + + D++ K +PG VV
Sbjct: 2 PGSMTTPASWNSPLRTGE-KYPLVIFSHGLGAFRTIYSAIGIGLASYGFIVATVEHRDGSASATYYFEDQVA--AKVENRTWLYLKMLKQEEEEKVRKQQVQQRAKECSQALSAILDIGHGSPKENILGSYFDVKQLEG---AIDEDKIAVFGHSFGGATVIQALSEDQR---------------FKCGVSLDPWMYPVSEELYSK-IPQPLFFINSAQFQSPKDIMKMKRFYQPGKERN---------MITIKGSVHQNFADFT-FVTGKIVGTRLTLKGEIDSGVAIDLTNKASLAFLQRHLGLHKDFNQWDSLVEGKNKNLIPGSPSDVV 302
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Match: PAFA_CAVPO (Platelet-activating factor acetylhydrolase n=2 Tax=Cavia porcellus TaxID=10141 RepID=PAFA_CAVPO) HSP 1 Score: 92.4 bits (228), Expect = 9.190e-16 Identity = 84/300 (28.00%), Postives = 129/300 (43.00%), Query Frame = 3 Query: 1311 VPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMF--------PDGRITTYAKAPNLKDVGAPDNHAFRLAQLRRRGREIELTRAHLARLARG----SATDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAEMDPEETGYSMAFIMDAWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDAGHTNFSDSPLFAPGPL--RKLQGAGDIDCVIFIDQVTRLALCALKIFL 2168
VP +P+ GE K P++IFSHGLG RS+Y+ G A+ G++ +EH D S ++ + R Y K NL+ R QLR+RG E + L + G + DL + L +D + A +GHSFGG TV+Q LS+++ + +D W FP E+ ++ + PL I S+ F A K E+ + VK + H NF D FA G + + L G ID + +D + + +L L+ +L
Sbjct: 130 VPAKWNSPLKTGE-KYPLIIFSHGLGAFRSIYSAIGIELASHGFIVAAVEHRDESAAATYYFQDAPAAESGNRSWIYYKVGNLETEE-------RKRQLRQRGEECSQALSWLLSIDEGEPVKNVLDLNF-DIQQLKGSLDRSKVAIIGHSFGGATVIQTLSEDQR---------------FRCGIALDPWMFPVGEDVHSK-IPQPLFFINSEYFQSANDTKKIEKFYQPQKERK---------MIAVKGSVHHNFVDFT-FATGKIIGQMLSLKGKIDSEVAMDLINKASLAFLQKYL 394 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.694.1 >prot_Ecto-sp6_S_contig100.694.1 ID=prot_Ecto-sp6_S_contig100.694.1|Name=mRNA_Ecto-sp6_S_contig100.694.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=759bp MCLLGSKDDFAASPPWNLCKLSPRKCPPIWKCMLWSPLEILMVSTTIALGback to top mRNA from alignment at Ecto-sp6_S_contig100:93739..103824- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig100.694.1 ID=mRNA_Ecto-sp6_S_contig100.694.1|Name=mRNA_Ecto-sp6_S_contig100.694.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=10086bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:93739..103824- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:93739..103824- >mRNA_Ecto-sp6_S_contig100.694.1 ID=mRNA_Ecto-sp6_S_contig100.694.1|Name=mRNA_Ecto-sp6_S_contig100.694.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2277bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:93739..103824- (Ectocarpus species6 EcLAC_371)back to top |