mRNA_Ecto-sp6_S_contig10.569.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig10.569.1
Unique NamemRNA_Ecto-sp6_S_contig10.569.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: D7FN93_ECTSI (Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN93_ECTSI)

HSP 1 Score: 583 bits (1504), Expect = 7.090e-209
Identity = 297/307 (96.74%), Postives = 298/307 (97.07%), Query Frame = 2 
Query:  110 AETRLWPFATAHHLLRDMVAPPMKTAVAVFTLFSGISLAWQAPTSPRSSTNSLVSRASSFCRTSSRSAAPFMRRRCATTQQNMAIKAATTSGFGMSMRGDAEGHGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVRDVVRGIQEE 1030
            AE RLW FATA HLLRDMVAPPMKTAVAVFTLFSGISLAWQAPTSPRSSTNSLVSRASS CRT SRSAAPFMRRRCATTQQNMAIKAATTSGFGMSMRGDAEGH AFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDP VIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRL D LIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVRDVVRGIQ+E
Sbjct:   36 AEARLWHFATAQHLLRDMVAPPMKTAVAVFTLFSGISLAWQAPTSPRSSTNSLVSRASSCCRTRSRSAAPFMRRRCATTQQNMAIKAATTSGFGMSMRGDAEGHRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLADMLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVRDVVRGIQQE 342
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BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A835YMS9_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMS9_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.300e-63
Identity = 109/195 (55.90%), Postives = 133/195 (68.21%), Query Frame = 2 
Query:  419 HGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVR 1003
            H      LL LTGDPLE  GGR+VV+RGDP A LM++GEAPGA ED  G PFVGRSGQLLD +L+A GFDPE ++YVSNIVRRRP +NR PT  E+ +Y P+LLEEI LV+P +I+  G  S +A+L  E RGIT+ RGQW  P    ++          MPWFHPSYLLRN    ++ EGG +W    D +EVR
Sbjct:   60 HAEMTAALLALTGDPLEPAGGRIVVYRGDPQAKLMVVGEAPGAMEDETGKPFVGRSGQLLDAILKAAGFDPETDLYVSNIVRRRPPENRDPTTAEIAYYRPWLLEEIRLVNPAIIITTGRWSMRAVL-NERRGITKVRGQWYAPGTTPDLPAATWA----MPWFHPSYLLRNP---TKDEGGPKWLTWVDAQEVR 246
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BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A3M1EZS2_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EZS2_9CHLR)

HSP 1 Score: 205 bits (522), Expect = 1.100e-61
Identity = 108/195 (55.38%), Postives = 134/195 (68.72%), Query Frame = 2 
Query:  419 HGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVR 1003
            H A VE L  LTGDPLE  GG +V++RG+P+A LM+IGE PGAEEDRL  PFVGRSGQLLD +LRAV FDPE +VY++N+V+RRP +NR PTPEE++FY P+L EEI LVDP +I+L G  +   +L  E RGIT+ RGQW +        GGR     IMP FHP+YLLRN          + W   +D+R VR
Sbjct:   30 HQALVEALENLTGDPLEPWGGNMVIYRGNPAAKLMVIGEGPGAEEDRLRKPFVGRSGQLLDKILRAVHFDPETDVYITNVVKRRPPENRDPTPEEINFYAPYLFEEIRLVDPKIIMLTGRYAMLTILG-EKRGITKVRGQWFE-------RGGRW----IMPMFHPAYLLRNPQRTPGSPKALTW---DDIRAVR 209
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BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A7C3BN30_9CHLR (Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7C3BN30_9CHLR)

HSP 1 Score: 197 bits (500), Expect = 1.180e-58
Identity = 100/195 (51.28%), Postives = 130/195 (66.67%), Query Frame = 2 
Query:  419 HGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVR 1003
            H   VE L  L GDPLE+ GG +V++RG+P+A LM+IGE PGA EDRL  PFVGRSG+LLD +L AV F+PE++VY+SN+VRRRP  NR P P+E+ FY P+L EEI L+DP +I+L+G  +   +L  E RGIT+ RGQW                + IMP FHP+YLLRN G+R      + W   +D+R VR
Sbjct:   11 HQELVEALNNLGGDPLEQWGGNIVIYRGNPAAKLMIIGEGPGANEDRLRKPFVGRSGKLLDQILSAVNFNPEQDVYISNVVRRRPPKNRDPLPKEIAFYAPYLFEEIRLLDPKIILLIGRHAMMTILK-EKRGITKVRGQWFQK-----------DGRWIMPMFHPAYLLRNPGKRPGSPKSLTW---DDIRAVR 190
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BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A1W9W486_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineaceae bacterium 4572_78 TaxID=1972460 RepID=A0A1W9W486_9CHLR)

HSP 1 Score: 189 bits (479), Expect = 2.090e-55
Identity = 98/195 (50.26%), Postives = 128/195 (65.64%), Query Frame = 2 
Query:  419 HGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVR 1003
            H A VE L  LT DPLE  G  +V++RG P A LM+IGEAPGAEED++G PFVGRSGQLLD +L+AV F+ E ++Y++N ++RRP +NR P  EE+++Y PFL EEI LVDP +I+L G  +   +L  E RGIT+ RGQW +        GGR     +MP FHP+YLLRN  +       + W    D+R VR
Sbjct:   15 HQALVETLKNLTDDPLESTGSNMVIYRGYPKADLMIIGEAPGAEEDKIGKPFVGRSGQLLDKILQAVHFNIETDIYITNTLKRRPPNNRNPKQEELEYYFPFLAEEIRLVDPKIILLAGKYAMLTIL-QEKRGITKVRGQWVE-------QGGRW----VMPIFHPAYLLRNPRKTPGSPKALMWE---DIRAVR 194
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BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: C1FF23_MICCC (Type-4 uracil-DNA glycosylase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FF23_MICCC)

HSP 1 Score: 188 bits (478), Expect = 1.070e-54
Identity = 93/191 (48.69%), Postives = 128/191 (67.02%), Query Frame = 2 
Query:  440 LLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVRDVV 1012
            L +LTGDPLE DGGR+V FRGD +A +M+IGEAPGAEED+LGVPFVGR+G+LLD++  +V    +R  YV+N+V+RRP++NR PT  E+++Y  +L EEI L+DP +IV  G  S + LL     GIT+ RG+W D           +  +++MP FHPSYLLRN  +       + W   +D+REV+  V
Sbjct:   62 LRSLTGDPLESDGGRIVTFRGDTNARVMIIGEAPGAEEDKLGVPFVGRAGKLLDEIFASVTLSTDRHCYVTNVVKRRPLNNRDPTAREIEWYRGYLREEIRLLDPAIIVCTGRHSMRTLLGKNCEGITKIRGRWFD-----------VDGRVVMPMFHPSYLLRNPQKTPGSPKALTW---DDIREVKRKV 238
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BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A7C3CIK3_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3CIK3_9CHLR)

HSP 1 Score: 186 bits (473), Expect = 1.940e-54
Identity = 98/204 (48.04%), Postives = 125/204 (61.27%), Query Frame = 2 
Query:  413 EGHGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVRDVVRGIQ 1024
            E H A +  +  LT DPL   G R+V++RG+P A L+++GE PGA EDRLG P+VGRSGQLLD +L A GFD +  VYV+N V RRP DNR PT  E+DFYLP+LLE I +VDP VI+L G  S + +L  E RGIT+ RG W            +  D+ IMP FHP+YLLRN      +   + W     +R   D + G Q
Sbjct:   13 ETHAAIIRAMEALTDDPLYPTGNRMVIYRGNPQADLLIVGEGPGANEDRLGKPYVGRSGQLLDKILEAAGFDSQNGVYVTNTVFRRPPDNRDPTQAELDFYLPYLLELIRIVDPKVILLTGRFSMRQILG-EKRGITKVRGTWY-----------QRHDRWIMPMFHPAYLLRNPSRAVGKPKSLTWQDIQAVRRKYDELGGDQ 204
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BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A7S2V4W6_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4W6_9STRA)

HSP 1 Score: 187 bits (476), Expect = 2.070e-54
Identity = 102/193 (52.85%), Postives = 128/193 (66.32%), Query Frame = 2 
Query:  428 FVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFD--PEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREV 1000
            F +   ++ GDPL+  GG VVVFRG+P   +M++GEAPG EED+  +PFVG++GQLL+ ML   GFD  P+ EVY++N+V+RRP +NR PTPEE+ FYLP L EEI LVDPD+IV  G+ S KALL  E RGIT+ RG W D              K  MP FHPSYLLRN   RS+++   RW   NDL  V
Sbjct:   64 FFQVTQSMEGDPLD-GGGSVVVFRGNPRGRVMVVGEAPGEEEDKQKLPFVGKAGQLLEKMLTEAGFDTGPQGEVYITNLVKRRPPNNRNPTPEEVSFYLPLLQEEIRLVDPDIIVCAGSFSMKALLE-EDRGITKVRGTWYD-----------YKGKKCMPIFHPSYLLRN---RSKEKNQPRWLTWNDLLNV 240
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BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: W7TG57_9STRA (Type-4 uracil-DNA glycosylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG57_9STRA)

HSP 1 Score: 189 bits (480), Expect = 2.320e-54
Identity = 100/196 (51.02%), Postives = 132/196 (67.35%), Query Frame = 2 
Query:  416 GHGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVR 1003
            GH  FV+ L  L GDPL+ +G RVV+ RG+  A +M+IGEAPG  ED  G PFVGR+G+LLD +L +VG D E  VY++N+V RRP +NRTP+  E+ +YLP+L+E + LVDP +I+L GA + KALLP E +GITR RGQW +     E        +L+MP FHPSYLLRN    SR+  G +W    D++ VR
Sbjct:   82 GHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLD-ESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNP---SRKVEGPKWLTWQDIQAVR 273
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BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A7S2S1J0_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1J0_9STRA)

HSP 1 Score: 188 bits (477), Expect = 7.480e-54
Identity = 94/185 (50.81%), Postives = 124/185 (67.03%), Query Frame = 2 
Query:  440 LLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLR 994
            L  L+GDPLEE GGRVV +RG+P A ++++GEAPGA ED LGVP+VGR+G+LLD +L A GFD E +VY +N+V+RRP +NR PT  E+ +Y P LLEE+ LVDP ++V  G  S + LL  + +GIT+ RGQW     L EIHG        MP FHPSYLLRN   ++     + W    ++R
Sbjct:   35 LAGLSGDPLEEFGGRVVHYRGNPGAKVVVVGEAPGATEDELGVPYVGRAGKLLDQILTAAGFDVEEDVYFTNVVKRRPPENRDPTAAELRYYSPLLLEELRLVDPWIVVCTGRFSMRTLLDVK-QGITKVRGQWFPLPGLPEIHG--------MPMFHPSYLLRNPSRKAGSPKSLTWVDAQEIR 210
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN93_ECTSI7.090e-20996.74Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus s... [more]
A0A835YMS9_9STRA1.300e-6355.90Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema mi... [more]
A0A3M1EZS2_9CHLR1.100e-6155.38Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae ... [more]
A0A7C3BN30_9CHLR1.180e-5851.28Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi ... [more]
A0A1W9W486_9CHLR2.090e-5550.26Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineac... [more]
C1FF23_MICCC1.070e-5448.69Type-4 uracil-DNA glycosylase n=1 Tax=Micromonas c... [more]
A0A7C3CIK3_9CHLR1.940e-5448.04Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae... [more]
A0A7S2V4W6_9STRA2.070e-5452.85Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa j... [more]
W7TG57_9STRA2.320e-5451.02Type-4 uracil-DNA glycosylase n=2 Tax=Monodopsidac... [more]
A0A7S2S1J0_9STRA7.480e-5450.81Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1566599..1572001 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score555.1
Seed ortholog evalue2e-155
Seed eggNOG ortholog2880.D7FN93
Model size1033
Hectar predicted targeting categorychloroplast
Exons6
EggNOG free text desc.UreE urease accessory protein, C-terminal domain
EggNOG OGs2EIJQ@1,2SNYZ@2759
Ec32 ortholog descriptionUracil-DNA glycosylase-like
Ec32 orthologEc-15_003440.1
Cds size873
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.569.1prot_Ecto-sp6_S_contig10.569.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig10 1566599..1571841 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348709.279603-CDS-Ecto-sp6_S_contig10:1566598..15667661682348709.279603-CDS-Ecto-sp6_S_contig10:1566598..1566766Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1566599..1566766 -
1682348709.2922728-CDS-Ecto-sp6_S_contig10:1567144..15672361682348709.2922728-CDS-Ecto-sp6_S_contig10:1567144..1567236Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1567145..1567236 -
1682348709.306323-CDS-Ecto-sp6_S_contig10:1568041..15681631682348709.306323-CDS-Ecto-sp6_S_contig10:1568041..1568163Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1568042..1568163 -
1682348709.31799-CDS-Ecto-sp6_S_contig10:1568731..15689101682348709.31799-CDS-Ecto-sp6_S_contig10:1568731..1568910Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1568732..1568910 -
1682348709.3268483-CDS-Ecto-sp6_S_contig10:1569393..15695081682348709.3268483-CDS-Ecto-sp6_S_contig10:1569393..1569508Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1569394..1569508 -
1682348709.337727-CDS-Ecto-sp6_S_contig10:1571644..15718411682348709.337727-CDS-Ecto-sp6_S_contig10:1571644..1571841Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig10 1571645..1571841 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348709.3466775-UTR-Ecto-sp6_S_contig10:1571841..15720011682348709.3466775-UTR-Ecto-sp6_S_contig10:1571841..1572001Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig10 1571842..1572001 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig10.569.1

>prot_Ecto-sp6_S_contig10.569.1 ID=prot_Ecto-sp6_S_contig10.569.1|Name=mRNA_Ecto-sp6_S_contig10.569.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=291bp
MVAPPMKTAVAVFTLFSGISLAWQAPTSPRSSTNSLVSRASSFCRTSSRS
AAPFMRRRCATTQQNMAIKAATTSGFGMSMRGDAEGHGAFVEKLLTLTGD
PLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDML
RAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDV
IVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWF
HPSYLLRNSGERSRQEGGVRWHARNDLREVRDVVRGIQEE*
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mRNA from alignment at Ecto-sp6_S_contig10:1566599..1572001-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.569.1 ID=mRNA_Ecto-sp6_S_contig10.569.1|Name=mRNA_Ecto-sp6_S_contig10.569.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5403bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1566599..1572001- (Ectocarpus species6 EcLAC_371)
ATGCTGCTGATTGTTGTCGATATCGCACAGAGCTCTCGGCGGTTTCACGG
AGTTGCAAATAAAGGAGGCATTTCGGTTCTTCCGTTCTCGGTACTGGAGA
TTGGAGAGTGCGGAGACTCGCTTGTGGCCTTTCGCCACTGCGCACCACCT
CCTGCGTGATATGGTTGCCCCGCCGATGAAGACTGCTGTCGCAGTGTTCA
CCCTCTTCTCAGGCATTTCACTCGCCTGGCAAGCTCCGACCTCTCCTCGC
AGCAGCACGAACTCCTTGGTATCAAGGGCATCCTCTTTCTGTAGGACCAG
TAGTAGGTCCGCTGCCCCTTTCATGCGCCGCCGCTGTGCAACGACTCAGC
AGAACATGTGAGCGTGTTTCGACTTTGGTTGCTTTGCCTGGGTGTGCTGC
GTTTGTGCGAGGCACCTCGCTCGTGCGTTGGATGTTGGTTTCGTCTTCTC
CGCTTTGTCCTCTCCGGTCAAGATCTCCGTAGATGTAGACTATGCTACAT
GTGTTGTTTGTGCGATGTCCCCAACATCCATGGTTGTACGCCACCAGAGG
GACAAAAGGGTAGGACATATCTCAATGGTGTTGAAGGTGCTTCAACCAAA
GAGCAAAAGAAAACAACAACACCAGTGGCAAGCGGCGTCCAAAGTCAAGG
TCTTTTCTTGGATGCTGAAAAAAAAGCGGGGATATTTCTTTTGCATCCCC
GGATCATCACCATAGTTTCGGTATTTGTTCTGGATCTGCCTGTCCTGTCT
GCGTGTCGGAAATCTTTGGTAAGCTGAAAATGTATGCAATCCATACATAC
ATGCGCAGAGTGTCCTATATTTGGCGCAGGGTCGTATGTCACCTACGGAT
TAGTTGTTAATGCGAGCAGTGTACCGCACTGGCTGTTTCTCCACCAAAGT
TGCACTTTTTTCTTTGTCCCAGAACGAATGTATGTATTGTATGTACCTCG
CGCCAGCACGACAGGGAAAACTGAAACACTAGGCAGAGCACCCATAAATA
GGGAAATTTTCGTACTTGTATAAGACACGAAACAACTTCCTACAATTATC
TAGGTTTTAGAGGGGTAGAGCCGGGTAGACACCCATCTCCCACCAATCAC
ACGTCGATTTTGTAAAACGTGTTGTAAGACAGAGACAGATGATTGGGCGA
TGGGCACGACGCTCTCGGGAGAATCCCCGAAATCCTCTTGCACAGCAGCA
CCACACACACCACGCAGACAACATACGAGACAGCCAGCACAGCAGCATAC
GGACTGCTGTAGGCCAAGGGCAGCCAAAGGCACACATCATAGGAGGCGTT
GGGTGTGAATCTTACAGCCCATTGCCTGCTGTCGGCAGCACAAGCGAGTG
ACGACGCAAATCAATCTGCGGTCCGTCTGCATCACCTCAACCTACCGATC
TTTGGAGCTTCCCGCACAGACGCATCCCCACACAACAGAGACAACGAGAC
GTACGCACTGCTGTAGGCCTAGCCCGGCCGAAGGCACACGTCATGGCTGG
CGTCGGAAGCTATTTTGAGACCCCGAGGCCGCCTGCTAGCAGCAAGCGAG
GGAACCTGCGAGTGCACACAAGTCAAATCTGTATGCGGGCTGTTCGTCTG
CAGGCCGATCTTTCTTCCACCACAGCAGCACCCCCGACACAGAGACAAGT
GAGACGTGCATAACGCTGTAGGTGGAGGGCGACCAAATATGCACATCGTA
GGAGGCATCGGGGGCGATTTTTGGAGCCCGTTGCCCGCTGCTAGCAGCGA
AAGCGAGGAAAGCAAGTGCACACCCATCCTGCACGGCAGCAGCCACAGCA
GCAGCAGCGACGTGTAGCTGATGATTATGAGAGCTAAACAACGCTCTCAG
TCATCCCCTGACTGACTGGTGGTGTCGGGTGATGTGTGAGCGTGTGCACT
GGTGACCTCTGTGGTCGCGTAGGCCCCATCCGTATCTATCTACGCTTGCT
TTGATGTCTCTCTCCGCTCCTCCTTTTCGCGCTTCGCGCGAAAATACATA
CATATTTTTTTGTCGGACCCCTATGTATGGGGGTGGAGCCAAACACTACT
GGTCTTTTGAGCCCAAGAAGTCGTGGGATTTTTCGAGTACACGTAACCTT
CGCTGTCGCTAGAACACCTTATCTTCTTCGCATATTGACATGCAACCAGC
GAACGAACGATTGGGGTATGAGAACAGCTTGAGCCTGTGGTGTCACACAG
ATTCACCGGGCTTGCACACGACGATCGGCATGGTTTACACGTACAGAACG
CGCCACCACGTTAGAATCTCTAATTTTGGCCGAGGCTCGTTTCTAGGGTA
TGTACCCCCACACGGCAACAACAGGTTATTTTTTAGGGGACAAACGTTTC
GACTGAGCACCTGTTATTTTTACCACGTTCTTTGTTTTGGTTTGCTGAGA
CTCAAGTTCTTAGTTACTACCGTCCTTACACACACGTGGAACGTTCTGTG
TTCGAATGCCTACTTCTTCTGTTTTGCGTTTTGGGTCCCGTAGGGCGATA
AAGGCGGCCACGACTTCAGGCTTTGGCATGAGTATGAGGGGAGATGCAGA
GGGCCATGGAGCTTTCGTCGAAAAGTTGCTGACGCTCACCGGGGACCCCC
TCGAGGAGGTACGGACGAGGACCCGCACATACTGGTGGTGTACGGCAGGG
TCATTGTTCATCCTTCTTCGCCGTCGAACCTTAGTGTTGCTGTTGTTGGT
ATGCGTTTGTTTTCTCTCTGTTTTCTGAAATCCCACCATCCCCATTGCTG
TTGCCAGTGGGCCCCCAACGGCGTGGTTGTGTGCCAACGTCGCAACCATT
GGTGTGACGGCTCGCTTGTGTGTCTGGTTGCTTGTACGTTCGAGTGCGTC
GCGAAACCGCAGCTGTCCCCAACCGCGCACGCTTCCGGTCTCCCATTGCT
TTCGCATTCGAGACAATCGCACGCAGCCTCTGCGCCCAAAACCAAGTACA
TGGCCTCAAACAATCCCAACCCATCCTTTCAGTAACCGTATTCTCCCCCA
ATCGGAAGCAAAAAATTGTTGTTGCCAAACGGGTTGGTTTTCACGCTTGA
TTGACCAATAGAGAACTCGACGGGCTTGGGGGGTTTCACAGGACGGGGGA
AGGGTCGTCGTTTTTCGCGGGGACCCCTCGGCGTCCCTGATGCTTATCGG
GGAAGCGCCGGGCGCCGAGGAAGACAGGCTCGGGGTGCCGTTCGTCGGTC
GGTCAGGGCAGCTACTGGACGACATGCTGAGGGCGGTCGGCTTCGATCCC
GAGCGGGAGGTCTACGTCAGGTGCGCTCGTTCGCTACGGACTGAATGAAG
GGTGTAAAAAAGAATAGACGAAATCTGCTACCTTGTACCAGGTACTATTA
TACCTGGACCGTGGACTCAGGGGCCAAGACTACCTGGACTGTGGACGCAA
GGGCCAAGAACGAAAAGACGAAACCCGCCTCTCGGTACCAGATAATGAAC
GGAGAAGAACGTCTCTCTGCGTGTTGGTTGGTCGAGAAGCTGTACCTTTG
CTTGTTGCTCTTCTTTGCGTTGAAAAGCATTTTCCGGGCGCATGTTCATC
TGCTACTAACTACCGTGGGGGTGCTGGTGCTTCGGCCGCGGCCGGGTTCC
TCTCCTCTCAGGGGCGGTTAGTGTTGGATCCCCGAACGGGGCGGTCAATT
TAGGTAGATGTATATCCTCGTGAGGCTACAAGTTCGAAAGGACGCGGATA
AACGCCGTGCTCGCAGTGTTCCGTCACCTGTTTACCTAAAGGACGAAGAC
CTACCTGCTACGCGTACCGTTTTGTTTTGCTGCGCAATATTCTGCGGTTC
CCTAAGCCTGTCGCATGCCTGTCCCCCTCGCGCCGCAGCAATATCGTGCG
GCGGAGACCGATCGACAACCGAACGCCTACCCCCGAGGAGATGGACTTCT
ACCTGCCGTTTCTCCTAGAGGAGATAGGGCTAGTCGACCCCGACGTCATC
GTACTGCTTGGTACGCCTACCCTGTTTAGGGTTAGGGTTAGGGTTGTTGA
TGATGCCCGTGCGGTTAGGCTGCTGACGCTCGTGCGGTTAGGCTGCGGAT
CCCCGTACGCGTTAGTGATCCTGGACTTGGAACCAGTGATGCTCTATACG
TGCTTCTCCGTCTAGGCATTAACTCTGGATACTTCTCGAGCCTATTCCGT
TGTAGGGTTTCCCGACCCCATTCCATAGACTGGTGTCTCATCATTTTCCC
ATAGAAATCAACGGGGTTATCCGTTGTGTGGCATGTTGCCATCGACCGTA
GAACCCGGCTTTGCTGTAGTCGTGGGTTACATTTTCAGCGCCGATAGGGC
TGGGGTTAACGTTGAACGGAAGCGCCATCTCTGAATAAAACGTTTGGGAA
TCCAGATGGCAGACAGAGGGAGTAGGAAAATGGGCAAATCAGAGTTTAAC
CTGTCCAGTTTAGAATGGCGAGCGCTGCACCTGCCTACATACCACGAGAG
CTTGAGTGCGAGCAGGAAAAACAAGAAACAGTCGTTTATTCATGGGATGG
TTCTTCCTAAGCAGGTTACTCCTAATCTCCCAGTTTTCCTAATCTCCCAG
TTTCGTCGGAGATGCGATTCCCTGCTGTCCATTTAGCGCTGTTATTTATG
GCAGCAACGGGTCGAAATCCTAACCTATGATGGAGGTGTATGCTAAAAGA
TTTTGGAATATCGGTGCTTAGTTCTTCAGAGGAAACAGAAGCACGGTCAA
CGTTGATCTCGCGAAGGAAAACCCCGAATAGGAAGTAACCTCCTTACCCA
TCCCACCCGATCCAGGCGCTAGCTCAACCAAGGCGCTCCTGCCGTACGAG
ACCCGGGGCATCACCAGGGCCCGAGGGCAGTGGGCGGACCCTGTGGCTTT
GGCCGAGGTAATCGTTGCCGCAGCTCGAACACCCGCCACCCGTTGCTGTA
ACTAACACTTCAGGCGGCGCCAAGCGAAACGCTGGCCGTAGCCCGCGGAC
GTCAGAGCTCTGGCCCGGGGTATTCCTGTTCGTAGCCTGCTAGAGTAGCT
CCAAGGGCTTACTGCCATTCCGTCGTGACCCTGACGGACCTAAGGAAAGC
CTTTGACAATACCTAAAACAACGACAGGTTTACCTACGGTCTCACTATAT
ATGAAATTCTTCGAATGCAGATCATGGTTTCTCTTCGTGCTTCCTGTGAC
TCTTATTCGCTTGCACCGCGACCCGCTACTGTTGTCCAGATTTTAACTCC
TGAACCCTCCCCCTGCACAACCACACTGAAACCAGATACACGGCGGCAGG
CTCACCGACAAGCTGATCATGCCCTGGTTCCACCCCAGCTACCTCCTTCG
CAACTCGGGGGAGCGCAGTCGGCAGGAGGGAGGCGTGCGATGGCACGCGA
GAAACGACCTAAGAGAAGTCCGCGACGTGGTTCGCGGCATTCAGGAGGAA
TGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:1566599..1572001-

>mRNA_Ecto-sp6_S_contig10.569.1 ID=mRNA_Ecto-sp6_S_contig10.569.1|Name=mRNA_Ecto-sp6_S_contig10.569.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=873bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:1566599..1572001- (Ectocarpus species6 EcLAC_371)
ATGGTTGCCCCGCCGATGAAGACTGCTGTCGCAGTGTTCACCCTCTTCTC
AGGCATTTCACTCGCCTGGCAAGCTCCGACCTCTCCTCGCAGCAGCACGA
ACTCCTTGGTATCAAGGGCATCCTCTTTCTGTAGGACCAGTAGTAGGTCC
GCTGCCCCTTTCATGCGCCGCCGCTGTGCAACGACTCAGCAGAACATGGC
GATAAAGGCGGCCACGACTTCAGGCTTTGGCATGAGTATGAGGGGAGATG
CAGAGGGCCATGGAGCTTTCGTCGAAAAGTTGCTGACGCTCACCGGGGAC
CCCCTCGAGGAGGACGGGGGAAGGGTCGTCGTTTTTCGCGGGGACCCCTC
GGCGTCCCTGATGCTTATCGGGGAAGCGCCGGGCGCCGAGGAAGACAGGC
TCGGGGTGCCGTTCGTCGGTCGGTCAGGGCAGCTACTGGACGACATGCTG
AGGGCGGTCGGCTTCGATCCCGAGCGGGAGGTCTACGTCAGCAATATCGT
GCGGCGGAGACCGATCGACAACCGAACGCCTACCCCCGAGGAGATGGACT
TCTACCTGCCGTTTCTCCTAGAGGAGATAGGGCTAGTCGACCCCGACGTC
ATCGTACTGCTTGGCGCTAGCTCAACCAAGGCGCTCCTGCCGTACGAGAC
CCGGGGCATCACCAGGGCCCGAGGGCAGTGGGCGGACCCTGTGGCTTTGG
CCGAGATACACGGCGGCAGGCTCACCGACAAGCTGATCATGCCCTGGTTC
CACCCCAGCTACCTCCTTCGCAACTCGGGGGAGCGCAGTCGGCAGGAGGG
AGGCGTGCGATGGCACGCGAGAAACGACCTAAGAGAAGTCCGCGACGTGG
TTCGCGGCATTCAGGAGGAATGA
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