prot_Ecto-sp6_S_contig10.569.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.569.1
Unique Nameprot_Ecto-sp6_S_contig10.569.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length291
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: D7FN93_ECTSI (Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN93_ECTSI)

HSP 1 Score: 553 bits (1426), Expect = 6.480e-198
Identity = 283/290 (97.59%), Postives = 284/290 (97.93%), Query Frame = 0
Query:    1 MVAPPMKTAVAVFTLFSGISLAWQAPTSPRSSTNSLVSRASSFCRTSSRSAAPFMRRRCATTQQNMAIKAATTSGFGMSMRGDAEGHGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVRDVVRGIQEE 290
            MVAPPMKTAVAVFTLFSGISLAWQAPTSPRSSTNSLVSRASS CRT SRSAAPFMRRRCATTQQNMAIKAATTSGFGMSMRGDAEGH AFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDP VIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRL D LIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVRDVVRGIQ+E
Sbjct:   53 MVAPPMKTAVAVFTLFSGISLAWQAPTSPRSSTNSLVSRASSCCRTRSRSAAPFMRRRCATTQQNMAIKAATTSGFGMSMRGDAEGHRAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPHVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLADMLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVRDVVRGIQQE 342          
BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A835YMS9_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMS9_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.350e-64
Identity = 109/195 (55.90%), Postives = 133/195 (68.21%), Query Frame = 0
Query:   87 HGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVR 281
            H      LL LTGDPLE  GGR+VV+RGDP A LM++GEAPGA ED  G PFVGRSGQLLD +L+A GFDPE ++YVSNIVRRRP +NR PT  E+ +Y P+LLEEI LV+P +I+  G  S +A+L  E RGIT+ RGQW  P    ++          MPWFHPSYLLRN    ++ EGG +W    D +EVR
Sbjct:   60 HAEMTAALLALTGDPLEPAGGRIVVYRGDPQAKLMVVGEAPGAMEDETGKPFVGRSGQLLDAILKAAGFDPETDLYVSNIVRRRPPENRDPTTAEIAYYRPWLLEEIRLVNPAIIITTGRWSMRAVL-NERRGITKVRGQWYAPGTTPDLPAATWA----MPWFHPSYLLRNP---TKDEGGPKWLTWVDAQEVR 246          
BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A3M1EZS2_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EZS2_9CHLR)

HSP 1 Score: 205 bits (522), Expect = 2.040e-62
Identity = 108/195 (55.38%), Postives = 134/195 (68.72%), Query Frame = 0
Query:   87 HGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVR 281
            H A VE L  LTGDPLE  GG +V++RG+P+A LM+IGE PGAEEDRL  PFVGRSGQLLD +LRAV FDPE +VY++N+V+RRP +NR PTPEE++FY P+L EEI LVDP +I+L G  +   +L  E RGIT+ RGQW +        GGR     IMP FHP+YLLRN          + W   +D+R VR
Sbjct:   30 HQALVEALENLTGDPLEPWGGNMVIYRGNPAAKLMVIGEGPGAEEDRLRKPFVGRSGQLLDKILRAVHFDPETDVYITNVVKRRPPENRDPTPEEINFYAPYLFEEIRLVDPKIIMLTGRYAMLTILG-EKRGITKVRGQWFE-------RGGRW----IMPMFHPAYLLRNPQRTPGSPKALTW---DDIRAVR 209          
BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A7C3BN30_9CHLR (Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7C3BN30_9CHLR)

HSP 1 Score: 197 bits (500), Expect = 2.250e-59
Identity = 100/195 (51.28%), Postives = 130/195 (66.67%), Query Frame = 0
Query:   87 HGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVR 281
            H   VE L  L GDPLE+ GG +V++RG+P+A LM+IGE PGA EDRL  PFVGRSG+LLD +L AV F+PE++VY+SN+VRRRP  NR P P+E+ FY P+L EEI L+DP +I+L+G  +   +L  E RGIT+ RGQW                + IMP FHP+YLLRN G+R      + W   +D+R VR
Sbjct:   11 HQELVEALNNLGGDPLEQWGGNIVIYRGNPAAKLMIIGEGPGANEDRLRKPFVGRSGKLLDQILSAVNFNPEQDVYISNVVRRRPPKNRDPLPKEIAFYAPYLFEEIRLLDPKIILLIGRHAMMTILK-EKRGITKVRGQWFQK-----------DGRWIMPMFHPAYLLRNPGKRPGSPKSLTW---DDIRAVR 190          
BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A1W9W486_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineaceae bacterium 4572_78 TaxID=1972460 RepID=A0A1W9W486_9CHLR)

HSP 1 Score: 189 bits (479), Expect = 4.120e-56
Identity = 98/195 (50.26%), Postives = 128/195 (65.64%), Query Frame = 0
Query:   87 HGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVR 281
            H A VE L  LT DPLE  G  +V++RG P A LM+IGEAPGAEED++G PFVGRSGQLLD +L+AV F+ E ++Y++N ++RRP +NR P  EE+++Y PFL EEI LVDP +I+L G  +   +L  E RGIT+ RGQW +        GGR     +MP FHP+YLLRN  +       + W    D+R VR
Sbjct:   15 HQALVETLKNLTDDPLESTGSNMVIYRGYPKADLMIIGEAPGAEEDKIGKPFVGRSGQLLDKILQAVHFNIETDIYITNTLKRRPPNNRNPKQEELEYYFPFLAEEIRLVDPKIILLAGKYAMLTIL-QEKRGITKVRGQWVE-------QGGRW----VMPIFHPAYLLRNPRKTPGSPKALMWE---DIRAVR 194          
BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: C1FF23_MICCC (Type-4 uracil-DNA glycosylase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FF23_MICCC)

HSP 1 Score: 188 bits (478), Expect = 2.110e-55
Identity = 93/191 (48.69%), Postives = 128/191 (67.02%), Query Frame = 0
Query:   94 LLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVRDVV 284
            L +LTGDPLE DGGR+V FRGD +A +M+IGEAPGAEED+LGVPFVGR+G+LLD++  +V    +R  YV+N+V+RRP++NR PT  E+++Y  +L EEI L+DP +IV  G  S + LL     GIT+ RG+W D           +  +++MP FHPSYLLRN  +       + W   +D+REV+  V
Sbjct:   62 LRSLTGDPLESDGGRIVTFRGDTNARVMIIGEAPGAEEDKLGVPFVGRAGKLLDEIFASVTLSTDRHCYVTNVVKRRPLNNRDPTAREIEWYRGYLREEIRLLDPAIIVCTGRHSMRTLLGKNCEGITKIRGRWFD-----------VDGRVVMPMFHPSYLLRNPQKTPGSPKALTW---DDIREVKRKV 238          
BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A7C3CIK3_9CHLR (Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3CIK3_9CHLR)

HSP 1 Score: 186 bits (473), Expect = 3.850e-55
Identity = 98/204 (48.04%), Postives = 125/204 (61.27%), Query Frame = 0
Query:   85 EGHGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVRDVVRGIQ 288
            E H A +  +  LT DPL   G R+V++RG+P A L+++GE PGA EDRLG P+VGRSGQLLD +L A GFD +  VYV+N V RRP DNR PT  E+DFYLP+LLE I +VDP VI+L G  S + +L  E RGIT+ RG W            +  D+ IMP FHP+YLLRN      +   + W     +R   D + G Q
Sbjct:   13 ETHAAIIRAMEALTDDPLYPTGNRMVIYRGNPQADLLIVGEGPGANEDRLGKPYVGRSGQLLDKILEAAGFDSQNGVYVTNTVFRRPPDNRDPTQAELDFYLPYLLELIRIVDPKVILLTGRFSMRQILG-EKRGITKVRGTWY-----------QRHDRWIMPMFHPAYLLRNPSRAVGKPKSLTWQDIQAVRRKYDELGGDQ 204          
BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A7S2V4W6_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4W6_9STRA)

HSP 1 Score: 187 bits (476), Expect = 4.100e-55
Identity = 102/193 (52.85%), Postives = 128/193 (66.32%), Query Frame = 0
Query:   90 FVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFD--PEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREV 280
            F +   ++ GDPL+  GG VVVFRG+P   +M++GEAPG EED+  +PFVG++GQLL+ ML   GFD  P+ EVY++N+V+RRP +NR PTPEE+ FYLP L EEI LVDPD+IV  G+ S KALL  E RGIT+ RG W D              K  MP FHPSYLLRN   RS+++   RW   NDL  V
Sbjct:   64 FFQVTQSMEGDPLD-GGGSVVVFRGNPRGRVMVVGEAPGEEEDKQKLPFVGKAGQLLEKMLTEAGFDTGPQGEVYITNLVKRRPPNNRNPTPEEVSFYLPLLQEEIRLVDPDIIVCAGSFSMKALLE-EDRGITKVRGTWYD-----------YKGKKCMPIFHPSYLLRN---RSKEKNQPRWLTWNDLLNV 240          
BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: W7TG57_9STRA (Type-4 uracil-DNA glycosylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG57_9STRA)

HSP 1 Score: 189 bits (480), Expect = 4.560e-55
Identity = 100/196 (51.02%), Postives = 132/196 (67.35%), Query Frame = 0
Query:   86 GHGAFVEKLLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLREVR 281
            GH  FV+ L  L GDPL+ +G RVV+ RG+  A +M+IGEAPG  ED  G PFVGR+G+LLD +L +VG D E  VY++N+V RRP +NRTP+  E+ +YLP+L+E + LVDP +I+L GA + KALLP E +GITR RGQW +     E        +L+MP FHPSYLLRN    SR+  G +W    D++ VR
Sbjct:   82 GHADFVQALQGLRGDPLQAEGTRVVIHRGNAGAKIMVIGEAPGETEDVEGKPFVGRAGKLLDAILASVGLD-ESSVYITNVVLRRPPNNRTPSASEVAWYLPYLMENVRLVDPLIILLAGACACKALLPLEKQGITRIRGQWFERRFGTEGGLDGQGSRLVMPIFHPSYLLRNP---SRKVEGPKWLTWQDIQAVR 273          
BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Match: A0A7S2S1J0_9STRA (Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1J0_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.480e-54
Identity = 94/185 (50.81%), Postives = 124/185 (67.03%), Query Frame = 0
Query:   94 LLTLTGDPLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDMLRAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDVIVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWFHPSYLLRNSGERSRQEGGVRWHARNDLR 278
            L  L+GDPLEE GGRVV +RG+P A ++++GEAPGA ED LGVP+VGR+G+LLD +L A GFD E +VY +N+V+RRP +NR PT  E+ +Y P LLEE+ LVDP ++V  G  S + LL  + +GIT+ RGQW     L EIHG        MP FHPSYLLRN   ++     + W    ++R
Sbjct:   35 LAGLSGDPLEEFGGRVVHYRGNPGAKVVVVGEAPGATEDELGVPYVGRAGKLLDQILTAAGFDVEEDVYFTNVVKRRPPENRDPTAAELRYYSPLLLEELRLVDPWIVVCTGRFSMRTLLDVK-QGITKVRGQWFPLPGLPEIHG--------MPMFHPSYLLRNPSRKAGSPKSLTWVDAQEIR 210          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN93_ECTSI6.480e-19897.59Type-4 uracil-DNA glycosylase n=1 Tax=Ectocarpus s... [more]
A0A835YMS9_9STRA2.350e-6455.90Type-4 uracil-DNA glycosylase n=1 Tax=Tribonema mi... [more]
A0A3M1EZS2_9CHLR2.040e-6255.38Type-4 uracil-DNA glycosylase n=1 Tax=Caldilineae ... [more]
A0A7C3BN30_9CHLR2.250e-5951.28Type-4 uracil-DNA glycosylase n=2 Tax=Chloroflexi ... [more]
A0A1W9W486_9CHLR4.120e-5650.26Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineac... [more]
C1FF23_MICCC2.110e-5548.69Type-4 uracil-DNA glycosylase n=1 Tax=Micromonas c... [more]
A0A7C3CIK3_9CHLR3.850e-5548.04Type-4 uracil-DNA glycosylase n=1 Tax=Anaerolineae... [more]
A0A7S2V4W6_9STRA4.100e-5552.85Type-4 uracil-DNA glycosylase n=1 Tax=Fibrocapsa j... [more]
W7TG57_9STRA4.560e-5551.02Type-4 uracil-DNA glycosylase n=2 Tax=Monodopsidac... [more]
A0A7S2S1J0_9STRA1.480e-5450.81Type-4 uracil-DNA glycosylase n=1 Tax=Rhizochromul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005122Uracil-DNA glycosylase-likeSMARTSM00986UDG_2coord: 111..278
e-value: 3.8E-31
score: 119.5
IPR005122Uracil-DNA glycosylase-likePFAMPF03167UDGcoord: 113..263
e-value: 3.3E-35
score: 121.4
NoneNo IPR availableSMARTSM00987UDG_2_acoord: 111..278
e-value: 3.8E-31
score: 119.5
NoneNo IPR availablePANTHERPTHR33693FAMILY NOT NAMEDcoord: 96..284
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..290
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.666
IPR005273Uracil-DNA glycosylase family 4TIGRFAMTIGR00758TIGR00758coord: 102..265
e-value: 8.9E-41
score: 137.4
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 90..290
e-value: 1.7E-50
score: 173.1
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 91..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1566599..1571841 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.569.1mRNA_Ecto-sp6_S_contig10.569.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 1566599..1572001 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.569.1 ID=prot_Ecto-sp6_S_contig10.569.1|Name=mRNA_Ecto-sp6_S_contig10.569.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=291bp
MVAPPMKTAVAVFTLFSGISLAWQAPTSPRSSTNSLVSRASSFCRTSSRS
AAPFMRRRCATTQQNMAIKAATTSGFGMSMRGDAEGHGAFVEKLLTLTGD
PLEEDGGRVVVFRGDPSASLMLIGEAPGAEEDRLGVPFVGRSGQLLDDML
RAVGFDPEREVYVSNIVRRRPIDNRTPTPEEMDFYLPFLLEEIGLVDPDV
IVLLGASSTKALLPYETRGITRARGQWADPVALAEIHGGRLTDKLIMPWF
HPSYLLRNSGERSRQEGGVRWHARNDLREVRDVVRGIQEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005122Uracil-DNA_glycosylase-like
IPR005273Ura-DNA_glyco_family4
IPR036895Uracil-DNA_glycosylase-like_sf