Homology
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match:
D8LSR0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSR0_ECTSI)
HSP 1 Score: 884 bits (2285), Expect = 4.640e-316
Identity = 534/572 (93.36%), Postives = 537/572 (93.88%), Query Frame = 2
Query: 86 MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHAARDSAPISVLRPFDRGYITNWEPEFEVWRRMLGRNFLNADPRDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQVLEEERESILKAQMKKRRAELNAYYAREAREAAAKARXXXXXXXXXXXXKAAHGRGTRLSTGVLVGGGNTRQRYDPTDPEGVMGLAHSKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADLLLVGSGAGKGLAMSDVCIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRYADW 1801
MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHAARDSAPIS+LRPFDRGYITNWEPEFEVWRRMLGRNFLNADPRDSRLLATEAPFGPLVLQEAANEV LEEERESILKAQMKKRRAELNA+YAREAREAAAKARXXXXXXXXXXXXKAAHGRGTRLSTGVLVGGGNTRQRYDPTDPEGVMGLAHSKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGKGLAMSDVCIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCI+RCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRYADW
Sbjct: 1 MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHAARDSAPISILRPFDRGYITNWEPEFEVWRRMLGRNFLNADPRDSRLLATEAPFGPLVLQEAANEV-------------------------LEEERESILKAQMKKRRAELNAHYAREAREAAAKARXXXXXXXXXXXXKAAHGRGTRLSTGVLVGGGNTRQRYDPTDPEGVMGLAHSKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AGKGLAMSDVCIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIERCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRYADW 546
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match:
A0A836CBT8_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT8_9STRA)
HSP 1 Score: 358 bits (920), Expect = 1.680e-112
Identity = 216/572 (37.76%), Postives = 281/572 (49.13%), Query Frame = 2
Query: 95 TLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHAARDSAPISVLRPFDRGYITNWEPEFEVWRRMLGRNFLNA-DPRDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQVLEEERESILKAQMKKRRAELNAYYAREAREAAAKARXXXXXXXXXXXXKAAHGRGTRLSTGVLVGGGNTRQRYDPTDPEGVMGLAHSKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADLLLVGSGAGKGLAMSDVCIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVR-PGN-PIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRYADW 1801
T+V DNGAG ++ G AG+ P HTMPNCT +IK Q ++ GDET A RD + + RP DRGY+ NWE E EVW+RM + LN +P+D LL TE PF P++L E ANEVVFEE GF ACYRCP AALS Y EQV G N+ + Y L +D +VVD GFSFTH+ FY+GRAL + +R+NVGGKLLTNYLKEV+SYRQ N+MDEF+++ +S YV+ D D+ A R + P + PIVREFVLPD K V++G+ R+ +RR E ED PQ L + +ERF +PE+LF PS+IG++Q G++E + I +CP L+P NVLLTGG P L+ERL +LR+ P + V V P P LHAWRGGS F A P+F +FAV+++EY+E GH C+ R++DW
Sbjct: 3 TVVIDNGAGSVRGGWAGEPNPRHTMPNCTAKIKNQTVVLAGDETVDAVRDKSQLVYQRPHDRGYLINWENELEVWKRMFDASHLNVQNPQDHALLFTEPPFAPIMLAETANEVVFEELGFTACYRCPPAALSVYLEQV-----------------------------------------------------------------GANSAEVYS----------------------------------------------------------------------------------------NALPPADAMVVVDMGFSFTHVFCFYKGRALQHATVRLNVGGKLLTNYLKEVLSYRQLNVMDEFDLVTQAMESTCYVAQDFKHDMLATRGLASPAHGPIVREFVLPDYKNVLQGYVRDPSEFTPEQRR---EHMAEDA--PQSLRLESERFAVPELLFKPSDIGIKQAGVAECIVQAIHKCPPFLQPVLPGNVLLTGGCANFPGLQERLQEELRSLVPWYATVRVRTPLAPHLHAWRGGSHFAAGPDFTAFAVTREEYNEQGHRFCRERFSDW 416
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match:
W7TWI5_9STRA (Actin-related protein 6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWI5_9STRA)
HSP 1 Score: 288 bits (737), Expect = 3.650e-85
Identity = 188/576 (32.64%), Postives = 262/576 (45.49%), Query Frame = 2
Query: 95 TLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHAARDSAPISVLRPFDRGYITNWEPEFEVWRRMLGRNFLNADPRDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQVLEEERESILKAQMKKRRAELNAYYAREAREAAAKARXXXXXXXXXXXXKAAHGRGTRLSTGVLVGGGNTRQRYDPTDPEGVMGLAHSKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADLLLVGSGAGKGLAMSDVCIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRA-------ARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGA-SPEFGSFAVSKQEYDEFGHHICKIRYAD 1798
TLV DNGA +K G AG P +PNC ++KGQ Q ++G++ + ++A + RPFDRGY+T+WE E ++W R G N DP + L+ TEAPF P L + +VVFEEFGFAAC + P+A+ S Y ++E++++ L H +G G G+ D +V+DSGFSFTH++P Y+G+A RVNVGGKLLTN LKE VSYRQWNMMDEF++M D K++L +VS + A++ +R VR + R FVLPD +T M+G+ ++V V+ QQ E + QVL+M ERF +PEVLF PS++GLRQ GL EAV ++ C LR Y N++LTGGN P +RL+ +LR P + V V P +P+ +AWRG + P+ VSK +YDE+G + R D
Sbjct: 37 TLVLDNGADRMKMGFAGDPAPRFYIPNCMAKLKGQLQWLIGEDM-DSVNNTANLQYTRPFDRGYLTDWEAEHQIWGRAFGANKAKVDPAQTHLVLTEAPFTPSPLATFSTQVVFEEFGFAACAKMPAASFSGYRYSLMEKQQQQQ---------------------------------------------------------------------------LGHQQGE-----------------------------------------------------------------------GTGV---DAVLVIDSGFSFTHVVPMYRGKAQRAGVRRVNVGGKLLTNLLKETVSYRQWNMMDEFQLMNDAKEALCFVSQNFGAEMAKIRPGGGPSRQVRTQEALRRNFVLPDFQTTMRGYVQDVQ----VQGHQQTEA------EQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVEACDIGLRGALYNNIVLTGGNVLFPGFAQRLHTELRIRVPEYYSVKVQAPPDPIEYAWRGAAHMAQYQPQI---FVSKSQYDEYGAEFIQERMFD 449
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match:
UPI00201F7C12 (actin-related protein 6-like isoform X1 n=3 Tax=Haliotis TaxID=6452 RepID=UPI00201F7C12)
HSP 1 Score: 251 bits (642), Expect = 4.300e-72
Identity = 164/571 (28.72%), Postives = 247/571 (43.26%), Query Frame = 2
Query: 98 LVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKG-QAQMVVGDETAHAARDSAPISVLRPFDRGYITNWEPEFEVWRRMLGRNFLNADPRDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQVLEEERESILKAQMKKRRAELNAYYAREAREAAAKARXXXXXXXXXXXXKAAHGRGTRLSTGVLVGGGNTRQRYDPTDPEGVMGLAHSKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADLLLVGSGAGKGLAMSDVCIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQ-----RCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
LV DNGAG K G A P +PNC + K + ++ +GD+ +D + + + PF +G++TNW+ E +VW M G++ + + + TE F QEA NEV FEE+ F A YRC ++ LS Y Q + +P GK L +VVD+G+SFTHI+P+++G+ + ++ RVNVGGKLLTN+LKE++SYRQ +MDE V+ VK+ + YV+ D AD+ AR N I R++VLPD + +G+ R QE+ + + Q++ M NERF +PE+LF+PS++G+++MG+ EA+ ++ C + ++P N+LLTGGNC +P ER+Y D+R AP +V V +P+ P +AW GG L P F V+KQE+DE GH+IC R+
Sbjct: 4 LVLDNGAGTAKVGYATDKEP-RIIPNCVTKAKNVRTRIFIGDQIDDC-KDLSGLYYMLPFQKGFLTNWDIERQVWDYMFGKDVFQVNSNECTAVVTEPCFNFASAQEAMNEVFFEEYQFNALYRCNASCLSQYKSQ------------------------------------------------------------------------KEEP--------------------------------------------------------------------------------------GKNLCT----LVVDTGYSFTHIVPYFKGKKIKEAIRRVNVGGKLLTNHLKEIISYRQLMVMDETYVINQVKEDVCYVATDFFADMNVARKRGKENTIARDYVLPDYTHIKRGYVRP-----------QEDTTGKAKDNEQLVRMNNERFAVPELLFHPSDVGIQEMGIPEAIINSLEPIQEGHCISEMKPHLLGNILLTGGNCHLPGFDERIYSDVRKLAPDEYDVTVTMPKNPAAYAWEGGCLLAKDPNFSKMVVTKQEFDEHGHNICYERF 399
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match:
A0A4P6D8B9_RHOPR (Putative arp6 actin-related protein panstrongylus megistus (Fragment) n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=A0A4P6D8B9_RHOPR)
HSP 1 Score: 242 bits (617), Expect = 1.170e-69
Identity = 115/259 (44.40%), Postives = 169/259 (65.25%), Query Frame = 2
Query: 1016 CIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
C+++D G+SFTHI P+ +G+ + R+ VGGKLLTN+LKE++SYRQ ++M+E VM VK+ +VS+D+ AD+ + P N IVR+++LPD + +G+ D V++ Q L M NERF +PEV+F+PS+IG+ QMGLSEAV IQ+CP R + Y N+++TGG+ P +ERLY+D+RA AP +VN+ LPE P+ +AW+GG L PEF +F V+K+EY+E G +IC R+
Sbjct: 66 CLIIDCGYSFTHIAPYIRGKKQKNAIKRIEVGGKLLTNHLKEIISYRQLHVMEETYVMNQVKEDTCFVSMDVMADMAKCKKKYPENDIVRDYILPDFTNLRRGYVHTFDKPPVVEQ--------------QKLRMNNERFSVPEVIFHPSDIGINQMGLSEAVRLSIQQCPEDARSELYKNIVVTGGSALFPGFKERLYKDVRADAPDEFDVNITLPENPVTYAWKGGKLISKDPEFYTFVVTKEEYEEEGPNICMERF 310
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match:
A0A4W3GRS0_CALMI (Uncharacterized protein n=9 Tax=Chondrichthyes TaxID=7777 RepID=A0A4W3GRS0_CALMI)
HSP 1 Score: 243 bits (619), Expect = 7.290e-69
Identity = 109/259 (42.08%), Postives = 172/259 (66.41%), Query Frame = 2
Query: 1016 CIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
C+VVDSG+SFTHI+P+ +G+ +++ R+NVGGKLL N+LKE++SYRQ ++MDE V+ VK+ + YVS D D+ A+ N ++R+++LPD T+ KGF K R++ + + Q+L + NERF +PE+LF+PS+IG+++MG+ EA+ +Q P + P FY N++LTGGN +P R+R+Y D+R+ P C+V+V+LPE P+ H+W GG L S +F V++ +Y+E GH IC+ ++
Sbjct: 145 CLVVDSGYSFTHIVPYCKGKKMNEGICRINVGGKLLANHLKEIISYRQLHVMDETHVINQVKEDVCYVSQDFYKDMEIAQLKGEANTVMRDYILPDFSTIKKGFC---------KPREEMVFSGKYKTSEQILRLTNERFAVPEILFHPSDIGIQEMGIPEAIVHSVQNLPEEMHPHFYNNIILTGGNTLLPGFRDRVYADVRSLTPCECDVSVLLPENPVTHSWEGGKLLSESSDFMDMVVTRDDYEENGHSICEEKF 394
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match:
F1QVP8_DANRE (Actin-related protein 6 n=30 Tax=Otophysi TaxID=186626 RepID=F1QVP8_DANRE)
HSP 1 Score: 242 bits (618), Expect = 1.010e-68
Identity = 112/261 (42.91%), Postives = 176/261 (67.43%), Query Frame = 2
Query: 1016 CIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQP--QVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
CIVVDSGFSFTHI+P+ +GR + + R+NVGGKLLTN+LKE++SYRQ ++MDE V+ VK+ + YVS D D+ A+ N +++++VLPD ++ KGF + + EE+ + + Q+L + NERF +PE+LF+PS+IG+++MG+ EA+ I P ++P FY N+LLTGGN P R+R+Y+++RA AP+ +V+V+LP P+ ++W GG L +P+F AV++ +Y+E GH+IC+ ++
Sbjct: 145 CIVVDSGFSFTHIVPYCRGRKMKEGICRINVGGKLLTNHLKEIISYRQLHVMDETHVINQVKEDVCYVSQDFYKDMEIAQLKGEDNTVMKDYVLPDFSSIKKGFCKPL-----------EEMNFTGKYKTGEQILRLTNERFAVPEMLFHPSDIGIQEMGIPEALVNSINNMPEEMQPHFYKNILLTGGNTLFPGFRDRVYKEVRALAPVEYDVSVVLPNNPICYSWEGGKLLAENPDFEEMAVTRDDYEENGHYICEEKF 394
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match:
T1I7M9_RHOPR (Uncharacterized protein n=6 Tax=Triatominae TaxID=70999 RepID=T1I7M9_RHOPR)
HSP 1 Score: 242 bits (617), Expect = 1.330e-68
Identity = 115/259 (44.40%), Postives = 169/259 (65.25%), Query Frame = 2
Query: 1016 CIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
C+++D G+SFTHI P+ +G+ + R+ VGGKLLTN+LKE++SYRQ ++M+E VM VK+ +VS+D+ AD+ + P N IVR+++LPD + +G+ D V++ Q L M NERF +PEV+F+PS+IG+ QMGLSEAV IQ+CP R + Y N+++TGG+ P +ERLY+D+RA AP +VN+ LPE P+ +AW+GG L PEF +F V+K+EY+E G +IC R+
Sbjct: 148 CLIIDCGYSFTHIAPYIRGKKQKNAIKRIEVGGKLLTNHLKEIISYRQLHVMEETYVMNQVKEDTCFVSMDVMADMAKCKKKYPENDIVRDYILPDFTNLRRGYVHTFDKPPVVEQ--------------QKLRMNNERFSVPEVIFHPSDIGINQMGLSEAVKLSIQQCPEDARSELYKNIVVTGGSALFPGFKERLYKDVRADAPDEFDVNITLPENPVTYAWKGGKLISKDPEFYTFVVTKEEYEEEGPNICMERF 392
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match:
A0A8C1B8E6_CYPCA (Actin related protein 6 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1B8E6_CYPCA)
HSP 1 Score: 240 bits (612), Expect = 5.030e-68
Identity = 109/259 (42.08%), Postives = 174/259 (67.18%), Query Frame = 2
Query: 1016 CIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
CIVVDSGFSFTHI+P+ +GR + + R+NVGGKLL+N+LKE++SYRQ ++MDE V+ VK+ + YVS D D+ A+ N ++R++VLPD ++ KGF + D E + + Q+L + NERF +PE+LF+PS+IG+++MG+ EA+ I P ++P FY N++LTGGN P R+R+Y+++RA AP+ +V+V+LP+ P+ + W GG L +P+F V++++Y+E GH++C+ ++
Sbjct: 134 CIVVDSGFSFTHIVPYCRGRKMKEGICRINVGGKLLSNHLKEIISYRQLHVMDETYVINQVKEDVCYVSQDFYKDMEIAQLKGEDNTVMRDYVLPDFSSIKKGFCKRGD-----------EFTGKYKTGEQILRLTNERFAVPEMLFHPSDIGIQEMGIPEALVNSINNMPEEMQPHFYKNIVLTGGNALFPGYRDRVYKEVRALAPVEYQVSVVLPQNPICYPWEGGKLLAENPDFEEMVVTREDYEENGHYVCEEKF 381
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match:
A0A672NPK4_SINGR (Actin-related protein 6-like n=5 Tax=Cyprininae TaxID=2743694 RepID=A0A672NPK4_SINGR)
HSP 1 Score: 237 bits (605), Expect = 6.720e-68
Identity = 110/259 (42.47%), Postives = 173/259 (66.80%), Query Frame = 2
Query: 1016 CIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
CIVVDSGFS THI+P+ +GR + + R+ VGGKLLTN+LKE++SYRQ ++MDE V+ VK+ + YVS D D+ A+ N ++RE+VLPD ++ KGF K R++ + + Q+L + NERF +PE+LF+PS+IG+++MG+ EA+ I P ++P FY N++LTGGN P R+R+Y+++RA AP+ EV+V+LP+ P+ + W GG L +P+F V++++Y+E GH++C+ ++
Sbjct: 64 CIVVDSGFSSTHIVPYCRGRKMKEGICRITVGGKLLTNHLKEIISYRQLHVMDETYVINQVKEDVCYVSQDFCKDMEIAQLKGEDNTVMREYVLPDFSSIKKGFC---------KPREEMNFTGKYKTGDQILRLTNERFAVPEMLFHPSDIGIQEMGIPEALVNSINNMPEEMQPHFYKNIVLTGGNTLFPGYRDRVYKEVRALAPVEYEVSVVLPQNPICYPWEGGKLLAENPDFEEMVVTREDYEENGHYVCEEKF 313
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 4.64e-316 / Id = 93.36 Expect = 1.68e-112 / Id = 37.76 Expect = 3.65e-85 / Id = 32.64 Expect = 4.30e-72 / Id = 28.72 Expect = 1.17e-69 / Id = 44.40 Expect = 7.29e-69 / Id = 42.08 Expect = 1.01e-68 / Id = 42.91 Expect = 1.33e-68 / Id = 44.40 Expect = 5.03e-68 / Id = 42.08 Expect = 6.72e-68 / Id = 42.47 Sequence D8LSR0_ECTSI A0A836CBT8_9STRA W7TWI5_9STRA UPI00201F7C12 A0A4P6D8B9_RHOPR A0A4W3GRS0_CALMI F1QVP8_DANRE T1I7M9_RHOPR A0A8C1B8E6_CYPCA A0A672NPK4_SINGR Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 885.9 Seed ortholog evalue 9.7e-255 Seed eggNOG ortholog 2880.D8LSR0 Preferred name ACTR6 Model size 2513 KEGG ko ko:K11662 Hectar predicted targeting category other localisation GOs GO:0000228,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000812,GO:0003674,GO:0003682,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0006325,GO:0006338,GO:0006342,GO:0006348,GO:0006355,GO:0006996,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031491,GO:0031974,GO:0031981,GO:0032991,GO:0034399,GO:0034728,GO:0040029,GO:0043044,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043486,GO:0043933,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044877,GO:0045814,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0060255,GO:0065007,GO:0070013,GO:0070603,GO:0070828,GO:0071824,GO:0071840,GO:0080090,GO:0097346,GO:0098687,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1904949,GO:2000112,GO:2000113,GO:2001141 Exons 12 EggNOG free text desc. chromatin remodeling EggNOG OGs KOG0680@1,KOG0680@2759 Ec32 ortholog description Actin-related protein Ec32 ortholog Ec-15_002940.1 Cds size 1719 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko03036,ko04812
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348704.0429313-UTR-Ecto-sp6_S_contig10:933068..933777 1682348704.0429313-UTR-Ecto-sp6_S_contig10:933068..933777 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig10 933069..933777 - 1682348704.1631336-UTR-Ecto-sp6_S_contig10:944234..944319 1682348704.1631336-UTR-Ecto-sp6_S_contig10:944234..944319 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig10 944235..944319 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348704.054632-CDS-Ecto-sp6_S_contig10:933777..933887 1682348704.054632-CDS-Ecto-sp6_S_contig10:933777..933887 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 933778..933887 - 1682348704.0632963-CDS-Ecto-sp6_S_contig10:934090..934263 1682348704.0632963-CDS-Ecto-sp6_S_contig10:934090..934263 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 934091..934263 - 1682348704.072146-CDS-Ecto-sp6_S_contig10:934989..935102 1682348704.072146-CDS-Ecto-sp6_S_contig10:934989..935102 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 934990..935102 - 1682348704.0811598-CDS-Ecto-sp6_S_contig10:935445..935569 1682348704.0811598-CDS-Ecto-sp6_S_contig10:935445..935569 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 935446..935569 - 1682348704.0901866-CDS-Ecto-sp6_S_contig10:935964..936065 1682348704.0901866-CDS-Ecto-sp6_S_contig10:935964..936065 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 935965..936065 - 1682348704.0988188-CDS-Ecto-sp6_S_contig10:936782..936875 1682348704.0988188-CDS-Ecto-sp6_S_contig10:936782..936875 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 936783..936875 - 1682348704.1077404-CDS-Ecto-sp6_S_contig10:937539..937915 1682348704.1077404-CDS-Ecto-sp6_S_contig10:937539..937915 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 937540..937915 - 1682348704.1165264-CDS-Ecto-sp6_S_contig10:939973..940159 1682348704.1165264-CDS-Ecto-sp6_S_contig10:939973..940159 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 939974..940159 - 1682348704.125299-CDS-Ecto-sp6_S_contig10:941397..941498 1682348704.125299-CDS-Ecto-sp6_S_contig10:941397..941498 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 941398..941498 - 1682348704.1346438-CDS-Ecto-sp6_S_contig10:942350..942464 1682348704.1346438-CDS-Ecto-sp6_S_contig10:942350..942464 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 942351..942464 - 1682348704.1441927-CDS-Ecto-sp6_S_contig10:943111..943219 1682348704.1441927-CDS-Ecto-sp6_S_contig10:943111..943219 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 943112..943219 - 1682348704.1537416-CDS-Ecto-sp6_S_contig10:944114..944234 1682348704.1537416-CDS-Ecto-sp6_S_contig10:944114..944234 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig10 944115..944234 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.511.1
>prot_Ecto-sp6_S_contig10.511.1 ID=prot_Ecto-sp6_S_contig10.511.1|Name=mRNA_Ecto-sp6_S_contig10.511.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=573bp
MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHA back to top mRNA from alignment at Ecto-sp6_S_contig10:933069..944319-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig10.511.1 ID=mRNA_Ecto-sp6_S_contig10.511.1|Name=mRNA_Ecto-sp6_S_contig10.511.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=11251bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:933069..944319- (Ectocarpus species6 EcLAC_371)CTTGCTTCTTGCGGTACCGCACCACACAGACAAGAACCCCACGTATGCAG
CTCGCACCGGCTAACGAAAGTGCTTCGCGTCTACC ATGTCGAAAACGCTG
GTGTTTGACAATGGGGCAGGTGGTTTGAAGGCTGGCACAGCAGGGCAGCT
CCGACCTTCCCACACCATGCCCAACTGCACTGGCAGGATCAAAGGACAGG
CTCAG GTGCTGTGTGCGAACAGTGTTTTACTTTCTTTAGTTTATCTTTAG
ATGGCTGCAGCCGGTAAGGCAGTGTGACTTGAGCTGCTCTCATTCTTGGG
GTGTACCTGTAAATTTTGCTGTCTACATTTATGGGGGTGTTGTATCTTCC
GTCATGAAGCTACTTGTTATGTCATGTGTTCGTACCATGGCTCTTCGCAC
GCCCCACCCTCACGATGTAACGTTTCATGTTTTCAACAATTTCCTGCTTC
GTTGGGTTGCCGACCGCTGGTGCTGCATGTTGTTGAGAGGTGTATGTATA
TTCCACGAGGTGAAGTCCAGGCGTGAAGGCTCAATTCGACGACCGCACAT
CAAGATCTCATGTACTGCTGATGCGTGCAGAGCACGCTCCCTTGGGACTC
ACGAAATTCGGGGGCAGAAGACAACTTCCTCTCCGCACCCCTGCGGACAA
CGAAACAGCAGTAGTCATCTCTTGTTATATTCACCTCTGTATTGAGCCTC
ACACGTTTGGTAAGAGGCCGAAATAACATGGATCGCTACCTTGTGCTGCT
GGGTACCTGTGTGTCAACGACAGCTGCAACGACGAAAAGAGGCGTTTTCT
TTTTCTCGTCACGGGCAGAGGCCTCCGCTGTTTTTCCTTCGGGCTTGTGC
ATTGTGATCATGGTGTCGAGACGGCAGCAGTTTGGTACTTACACCAATAG
CCATCTCCCGGAGACCCTAAGGTGAAACAAGCTGCCCGGACCCCCCCCTG
TCGTCTGCATGTATGCATACCATACGATGCAGCCTTGAGCTCGCCTGGCG
TCGAAAAGATGGAGTATCATTTCTGTCAACATCTTGTCTGTAGCCATGCT
CCGACACCGCGTTCTCTCGTTGGCGTTTCTCGAACAAACACCAAAATCAG
ATGGTGGTCGGAGACGAGACGGCGCATGCGGCGAGAGACTCGGCGCCGAT
TTCGGTCCTGAGACCGTTCGACCGCGGGTACATCACCAACTGGGAGCCCG
AGTTCGAG GTGCGCGTTCGACAAGAAAATAATCTGTTGCTTTTGCCGAGA
GGGAATAACGGAATCGAACCACTGGGAGAAGAAGGGTCTCGACGTGTGTA
CGGAATGTTGAAAGAAGGAGGAGCATTCAAGGGGTGCCTAAACGGACCAA
ATGGGTGCAGCGACAAGCTTATGTCAAGGTCAAATTGGACTGGTAACGTC
GCTTGTGTATTGGAACACCCCCTGATTTCGCCAGGGTAGGTGGGTGACAC
ACGCGCCCTGTAGATATCCCGAAATCTGTGTAGTTTGCGGCGGTGGTTTT
ATCTGTGGTGGCGGCAGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTT
CTCCTGTTTTCTGCTTTGCCCAATTGTTTGCATAGCGTTTGTTAACTCCT
GCTGCTGCGGCTGCTATTTTCTTCTTGGTGCTATTGTTTGGAAGCCATCA
TCGGGTTTATCTTGTAGACCGTCACCCCGGTCTTGTTTTTTTATTTCGTG
CCGTCAGAAGCAGTCCACAGGTATGGCGGAACGTGCGGGATAGGGAATCA
CGCCGGTGTTTTGTGTGAAAACAACACCACCACCACCAACCACAACGGCA
AACCCAACAACAACCTTACCAACAACACCTTTTTCAATCGCCTTAACCTC
GTCAGGTGTGGCGACGCATGCTTGGACGAAATTTCCTCAACGCCGACCCT
CGCGACAGCCGCCTCCTTGCTACCGAGGCCCCCTTCGGTCCCCTCGTTCT
CCAGGAAGCGGCCAACGAG GTGCGACCTAGACTTGACGGTTTCAACGACC
ATAGGGCGGGGGGAGTTCGTTGTGAGAAGGGAAGGATCTTAGAAATTTCA
CATGCAATCACAGCAAGACTACCTGTTCGAGATGTAACCACGGTCGCACT
AGAATTTTTGTAATAATGCAGGGGGAGAGGACATGCGTGCTTTTAGTAAG
AAGATTGGTGGTGCTTTTTTTTTTTTTTTTGTTCCTTTTGCGTTGTTTTC
AGATAAAAGACATTGTATCGTGTGTGGAAGGAGTTGTATTCGCGCTGACA
CACAGCGGAGGTGTGGTAGCAAGGTTGGAGGTTTAGGTCCACTAGCTACT
GTCCTGTTGGCTGCTCGTTGGATCGGACGCCATTACGGCAGCAGAAATGG
AATATCCAACCCCGGCCATGGCATCGAAGTGTTGAGAGATATGAAGACGA
GCAGTGCGGTATTCTGCATCGGGTGTGGCACAGTGTGTCACGCAATCTTT
CCCCTCACCTTTGAGTCCTTTGTGTTGGTCGACGTTCGAGCGGTAACTGC
TGTCATCCCGTATCACATTTTGCGTTAACGGGTGGCATCCCCTGTGAGGG
CGGTACCCTTGTGATGGCTGTGTACTTTTTACTTTTCCAACCATTCTAGA
AGTTGAGCGACTACGCTGCTCACGCCCGCTTGGCATCCGAGCAAAACCAA
CACGTGAATGGCGGGCGTCCTTGATTTGTCGTCTTGACTATCGCACCCAT
CGTCGACGGCCTGTTGGAAACCATGATCGACACTTTTGGGACTCCCCCGG
GCGTGGCTGGGCTGGGCTTGGCTGGCGATCTGTCACATGCTGTGTTGCTT
CTGCTGCTGCTGCTGCTGCAGGTGGTGTTTGAAGAGTTCGGGTTCGCGGC
GTGCTACCGGTGTCCCTCCGCGGCACTGAGCTGCTACCACGAGCAGGTGC
TGGAGGAGGAGAGGGAGAGCAT GTGAGTTGCTGCTGCTGATACTGCTGAT
ACTGCTGCCGCTGCCGGGACGTTGTTGTTTTGGTTGTCTCGCCGTAGCAG
TCAGTGTTGGAAATCGAACATCGAGTTTCGATACATATCTATTATCGGAC
GTCCGATATCCATATCGAAATCGCCGGTTTGTAACCCGATATTGGTCGAT
ATAATCAATATCAAATATCAATATCGAATATCGATATTCGATATTTGCCC
CCCTATTTCGGGAATTCTAGAGGGGGGGAGGGGGTTCCGAGCAGTCGACC
CCCCCTTTTTTTTTTGCTCCCGGCGCGGGCGCGCCCGCTTGTTCAGCCGA
CAGTCGACAACTCACACCCCACCACACACCACACGCACAGCGTCTACCTA
TTACCTTCAGTCTTTCGGCTTTGTCGGCGGCGACAGTACAGAGTCCGCGG
TCGACGTTTCTGCCGACCTAAACGAGCAGAATAGTTTCGATGAACATAGC
TTTTGTACGTGGCGCCCACGCGCCCACTTTTGCAGTGCGCAGCACCAGTT
GCCAGTTAACCATTGCTGCTGTAACATGCACGCCGTGTGCCCCGCGGTAC
ACTGGCACGCTGGCACTTGAAATGCCGCTCGGCCACTCGGTCGTTTGCGA
ACTGTACTTAATACTTGATACGTGCCGTGATCCGTGATCCTTCATGCCCG
TCAAAAACAGCTGAATTATCAAGTTGGAATTATCGAAATATATCGAATAT
CTAAAATCGATTGATGTCGAGCCGTTTTTCCCAATATCGAAAAATATCGA
TTATCGAAGTTCTTATCCCGGTGATCCACAAATATCTATCGAACTTTTTT
TGCGGTCCGATTTCCAACACTGGTAGCAGTGCACCAAGCAGGTTTCTGTT
CTCTCTCTCTCTCTTTCTCTATCTATCTCTCTATCCATCTCTATCTCTTT
CTCTCCCTCTTGTCTCGCTTGTCCCTCTGTCTCTCTCTCTCGTGGCCCTC
TCGTCGCTGTAGCAGCGCCCGAATGAATATCAACCCCAACTACTGTTATG
CGCACCATCCCCCAGAATGCAGCAGAGTTCGTTTTCCATCCCTCCGCTAA
CCTGCTGCTGCTCGTCCTTGTCTTCCGCCCTCCCGTGTTCCGATTTCTCC
TCCGCCCCCCTTTTTTTTGTGTGTCGTGCTTTGTTCTTCCAACAAAAACT
GGCTTCAACGACGATTTATTTCGTTATTGGACGCCCTCCACTCTCTACGT
ACGCCCGCAGCCTGAAGGCGCAGATGAAGAAGAGGCGGGCCGAGCTCAAC
GCCTACTACGCGCGAGAGGCGAGAGAGGCGGCGGCCAAGGCTAGGGCTGA
GGAGGAGGCGGCGAGGGCGGCGGCCGCGGCAAAGGCGGCGCATGGCCGAG
GGACTCGCCTGAGCACGGGGGTATTGGTCGGGGGCGGGAACACCCG GTGA
GGAAGGGGGGGGGGCGGGGGGGGCGTACGCATGTTTTGGATGCCTTCGCT
GTTAGACCATTGACCACGAGCGGGTTCGGGGCATGCCTTAGCTGTTATAC
AATTGCCCACGGGTGGTTTTGGGGCACTCGGGTGTTGCTTGCGTTTTGCA
GGTGGGCGGGTTCGAGCGTCGTACAGCAGTTATCCTTTGTTGCAGGGGAG
ACAGGTCGGGCACGTAGACCCTTCCGGTATTTACCACTTCCTTGGTTAAC
GGGCGGCGATGGAAAGGGGGCGGTAAGGGGGCGCGAGCTCTCGATTCAAG
CAGGATGAGAGAATTGAAAGCAAGGGGATTTGCTGTCCTCCCTTGTGTGC
ATCTCTTCGTCTCGGATCGACCGTGCCGCCCGGCGAAAAATGAGCAGACA
TCGGTGGTATGTAGGTGTATTGCGTGCACCCCTCCCCCCCTCTGAACCCA
TTCATTATTAGAAACATTATTAAAAAGTGTGTGTGCAATCACAGAAAAGA
CTCTGCTCGTTCGAGATGCAGCCACAGTCCACGGAGATGTGAGGAAGCCT
TTTTTTTTGTTGCTGGATGAACACGAGCCGTCGAGGGCACTGACTGACAG
GAATGGAACAGTTGAAGATTGATGGGGTTTTTTCTAATAAGAATGGAACA
CAGGGGATGCCGTGTCCTTTTTATCCCTTGACGGGATGGAGGCTCGACGA
AAAGAGGCGTGCGGGAGGGGCGGGGATGTCAAGGAGCGGCGTGAAAAGGC
TAGCAGGCCGAGGTCGGGGTGTTGGGGGCAAAAGCGGTTTGGTTGTCGGG
AGACTTTTGCTCTAGCTCGTGAGGGCTTTGAGTATCTGGCTTTCTCGATA
TGCCCTTCCGCCGCATGCCCTCGCAGCCCTTCCCCGTGCCGAGTTACGCC
GCGCATTTTCTGCCGGTCCCGATCCCCACCAATCAAAAACACCCTTCTCG
GCTCCTCTCCCCCGGCCGTCTCAATTTGACGTCTCTTTATTGACGTTAAT
TTTTCGGCGTGTCAAGTAATTCGGGTGTTCCTAGAGAAACTCGCGCCCGG
TTCTTTGCTCTCTCTCGTCGCCATCTGCCCTCTCCTGTCTCCCTTGACCT
CTCCCTCTTCGTGAGGGGCGAGGAAGGTTGACGGGAGAGGGTGGGAGGTG
CTTGAGAGAGACGTTGGATGGGTGTGTGCCGTGGCGGACAGGTTTCCCTC
AGCTAGAATTGCTGTGAAAGGAGAAGTATTACGCCACGGACATTTGTTGT
GCATGGGTATTTTCCCTAGTTTTTGTTTCACACATAGTTCTCTCTGACTC
TCTAATTTAAGATGAAGTCTATTTTCAACATCTGATGGCGCGGCTGCCGC
TTTGTATACTGTTGGTACGGTTGTCTTCCCCATTACACACGCTGAGCCAG
CGCTCATCATGTTGTGCCAACTAGTTGTTGACACCAATTTGAGCATGGTA
TCAGACCTCTGTGCGTTTCTAGCTCTCATCTTTCGTTTATTCCCTCGGAA
ACTTAAACAATACTACCTTCTTTTGTCTACTATTTTGTCGTGTGATTTTT
TTTTGGGGGGGAAGGGTCTCGGTTTTTGCCGTCGGCTCGCGGTCAGTGAG
TTTGTGCTTGGGCCGCGATAGACGAGAAAATCAGTGCTATACCTGGGGTG
CGAAATGAAAGGAGACGATACTTTTCTCGGAATGTTCCGTTTGGCGAGCC
CGTCAACCTCCGCAATGGATTGCCGAAGAACAATTTGGTGGGCACCGCTG
CGTACCTCTACCGCAATCGGATAGAGCCATGCCCGCGAAGTTCTCTCGTG
CTCACGAAAGGCGCGGCAGCGCCCCTGTTCCCCCGAAACGCGACTCCGAC
ACCGATCACCTTCTCGTGTTAAAGCTCGAGCTCGGTACAGCCGTATTTGC
ATGTGTAGGTTGAATAACTACTTTCATCGAGCTGCTTTCGTCTTGCAGTT
TGGCTTCGATAAACTCGTACTTGTTTTTTTTTTGCGACCATCATCCCTTG
CGGCTTTCCGCCCCTCCCTCTTGCGTGTGGAAATACGAAAACCCCTCCCC
CAAGACAACGGTACGATCCCACCGATCCGGAAGGGGTGATGGGACTGGCG
CACTCGAAGGGAAGCAGCGGTAGCAGTTCCGCCGCTGCCGCTTCCAAGTC
GCCGGAAGAAGACCGAGAAGAAGACGAAAAGGAGGAGGACGACGAGGAAA
TGGAGGAGGAGGAAGTTTGGGAGAAGGAGGAGGACGTGCAGCTGGACGAC
CCCACCGCCGCCGCTGAAGGCGGCGGTGGTGGTGGTGGTGCGGGTGCAGC
GGATCTGCTGCTGGTTGGCAGCGGGGCCGGGAAGGGGCTCGCCATGTCGG
ACGTGTGCATCGTCGTGGACTCCGGGTTCTCGTTCACGCACATCCTGCCG
TTCTACCAGGGCCGCGCTCTGCACAAGTCG GTGAGCGCTGCTGCTGCTGG
TGTGGGAGCGGGCTACAGAAGACGCCACCGCTTGAAAAACTTATTGTTTC
CCCCCCCCCGCGAGACTCGTTTCTTGTTTCCCCTGTGGGGTCGCTTTAGG
ATTCGGCTTCAATGGTGTTAAGTGGACATGATTCGTACCGTGCGCTCGCT
CAGGTTCTTGAACTTCTCCTTACTTGATGAGATTTCATTGACAGGTTTTT
TACTAAGGGGTGGCGGTTTCTGAAGTTGTCAGCTTGTTTTCATCCCTCTG
ATGAACATGTAGGTTGTTTGGTGCCAAACAAACTAGGGGGGAGTTGGGGG
ATGCTGTGCATTCCTCTGCATGTGTTGTGTACCCTTGGTAAGTGTGTCTC
GAGTTTGTCGTTGGTGGACGTTCGGCTTCCTTTTTTTTTTTTTCAAGAGC
CAGGGACCGCGAGAACGGGCGGTCAGACACGCGACTGGAATGCACTGTCA
CTTTGAAGACAATATTTTGGTACTATCTTTGTTCTCCTACCGTAGTGTCT
CGTTTTACTAATGTACTTTTCGCGCACTCTGCTGCCCCCCCCCCAACACA
CCCCCTGCTGCCTCCCTGACTGCACTCGGTTCCCGTCTTGTTGTGTGCGC
CTCTTGCGTGCTCTTGGAACCCTTTCTTGTCCCGTCGTATCCAGGCGCTT
AGGGTGAACGTGGGCGGGAAGTTGCTGACCAACTACCTAAAGGAGGTCGT
GTCTTACCGGCAGTGGAATATGATGGACGAGTTCGAG GTGAGACTTGGCT
CCTCCTCGGACTTGTCTTAGAGCCCACAGGCCTTGTCTTAAGACCCATCG
GCCTATTTAAGCTTGTATGCCAGTCCAAGAACGGTTGTTCTGCCGGCGTC
GACTGCGTGTTTCGCGGTGTTGCTCATGTCGGGTGATGTTGACAACGGGC
GTGAGCTTCTGCATGTTTCCGTGGCGTTTGTCGTGCCTAGTGCACTTGAC
AACAGGCGTTCACGTCTACATGTTTCCATGATATTGTTCGTGCCGAACAC
GCTTAAAAACAGGCGTTCACTGCTGTTTGCTCTCTGTTGGTGGGCGGTAG
GGAACGGTCTTACGATTACGGTTGGGCCATGGTTTTGAGAGATCGGCGCG
CTTCAGGCCCGGCGCACGATGGTATTCCTTTGAAGGATGTCCTGTATTCG
GGACGATTCGACGCGCCGATAGTGGCACGATGATGAGTGATGAGTTCTGG
CAGCTTTTTACGCCCCTCGGGTTGGGATTGTCTGCGTGCGCGCGATATTC
GAAAGGCTGTTGTCCCTCCCCACTCGCCGCCGAATACATTTTTTTAGCCA
CGTTTGGCAAAATACGAAGGCACGATTGGCCATCGGTGATCAGTCCTGTG
GGGACAACGCTCCGTCCTTTCGAGGACGCGTGGCCGATGGTCTAACAGTA
GGGCATGCAAAACATAAGACGCCCCTCGCCCCCCCGCCCCCCGGTCTCTG
ACAGGTTATGCAGGACGTGAAAGACTCGTTGAGTTACGTTAGTCTCGACC
TGGACGCCGATCTTCGCGCGGCACGCAACGTGAGACCAGGCAACCCGATC
GTCAG GTGAGCACAGCGGTTGCTACTGCTGTACCGCTTCTCTAAGGAACG
GTGCTGTCGATGAAGAACAGTTCGCGGCGGTCGAGTCTTCAAATTTTGTT
TCTCCTAGTGATGGACGCTCAGTCGCGGCGGCGGGGGCGGCAATCGGTGA
TCATCCCGTGAGCTTCCCTCGCGCATTCGCACGCACGCCCTGTTCTCTAC
TTTTGTGTTTTTTCGCTGCTATTCCTATGGCGTTCGTGAAATGCTGTTGC
CACTCTGCTGTTGTTGTCGATGCTGCTGCTATTGTAGTTGCGTTTTTGCT
GTTGCCACTGTTGTTGTTTCTACTGTTGCTGGTGCTGCTGCTGCTGCTGG
AGTCCATTGATTCCGCTCACGCTGTGGTCGTTTGTTCATCTGCCAACCAG
AGAATTCGTCCTCCCGGACCGCAAGACGGTGATGAAAGGGTTTGCTAGAG
AGGTGGACTGGGACGCCCGCGTGAAGCGACGACAGCAGGAGGAGCTCGGG
GTGGAGGATGAACAACAGCCGCAG GTAATTTTAACACTGTCTACCTAAAC
GCCAGGCATGGCCCGGCATCTTTGTTGTTGATGAATATTTTTTTGACCTA
GACGCGCGAAGCATGCTCCGGCACCTTTATTGTGGAGGCTTCTTTTCTCA
CGTAAATTCCGAACGTGGTTCGGCACCTTTGTTTGTTGATGCGTCTTTGT
TACCTAAACGCTATTTAGAACATGGCTCTCGGCACCTTTTGGGGTGATGC
GTGATGGTGTTCAGTTCACGACCATACGATGTTAGCTCCTTGACTCGATA
CGGCCGCCGCCGCCGCCGCCGCTGGCGGCTGGCGCTCCTCTCCGTGTGTG
CGCATGTGCGCATGTAGGTCCTGACTATGGGAAACGAGCGGTTTCACATA
CCGGAGGTGCTCTTCAACCCGTCCAACATCGGGCTGAGACAGATGGGGCT
CTCCGAGGCCGTCGCGACATGTATACAACG GTGACTATATAGAAGCAGCA
TGGTGATTGTAGCCGGTGGTTGGAGAACGGAGATGGTAGGCCGGGGATTA
GTAAAAACGGGGATTATTGAACGGCGGTGAAGGTGATTTAGAAAAGAACG
GGGATTGTAGAAGTGATTGTCGCACCCGTGGTTATGGCACGGGGTTTGTG
CCGAGGCTTGGGTGGTGGGCTTGTTGGAGAGGTTGTACATAGGGCCATCA
GTCTATGAATCTGTCGGCGGGCGAATCTATCACTCGATGAGTCAGTCGTG
TAGGGCTTGGTGAGGTCTCGCTTTGACGCAGGGGGAAGATGAGGCTACGT
GCCCGGTAGTGCATGTGTTGGGTGCCCGGTAGTGCATGTGTTGGCATTTT
ATTTTCATTCGGCGCCGTTTGGGCTTTCTTCTTTGGCGTGGACTGCGCCA
ATCGCCTGGCCAGAAGAATTAGGTACGCAGTAGCGGGGGGTTGGTGTGGC
GATTGCCCCCTTGTTATGCATAGCCGACGGTGCACGATTCCGACATGAGA
CTTCTATTTCTTGCTGTTTTTTTTTGGCGGTCTCGATGCCCGTTCCCGTG
CGTTTTTGCTTTCTTTTGGTATGTGTGTTTTCTCTCTTCACCTCGCTGCG
TCCCCAACACTTCTCTCCTCGAGTGCCGCTTCTGCTTTCCTTAACCCACC
CTTTTTTTTTTGTATTTTCCCCTACGGCGCCATTTCCCTCCCCAATGCTG
CCAAAGGTGCCCCGCTGCGCTGCGACCACAGTTCTACGCTAACGTCCTCC
TTACGGGGGGAAACTGCGCCATCCCCAACCTGAGGGAGCGGCTTTACAGA
GATCTACGGGCCTCCGCCCCCATTCACTGCGAGGTCAACGTCATCCTGCC
GGAGGAGCCCATGCTGCACGCCTGGCGAG GTATGGAAACCTTTCCAAACG
GTATCTATCTTGCCGATCATTGCGGAAACGCGGGGAGACCCTGAACAAAA
AATATTTTTGTCGCGTTCGTGTGAGCGTGTGAAGTCTGTTCTTGTGTGTA
CGTGTAGCTTTCCGATCTCATGTTCTGTTGTTTTGTGCGCGTGTTAACTC
ACATACCTTCGGTCTCATGAACCCAACGTTAGGTGGGTCGCTTTTCGGCG
CCAGTCCGGAGTTCGGCAGCTTCGCCGTGAGCAAGCAAGAGTACGACGAG
TTCGGACACCACATCTGCAAGATCAGATACGCCGACTGGTGA CGGCCTCA
TGATCCGGTCGCTTCGTGATGCCGCGGAACGACATTCATGTTCCCGTCGA
CATCTTGAGCGTTGCTTGTTGCCGATTGTCGTGATGGCGTCGAGATGCGC
GTACAAGTTGTAAAGTTGGATTCGTTCCGTGTTGACACCGGTCGACGATT
GAAGTGCCAATGAGAGTTGCTGAAAATGCCGGCGAGAGGTGCTGCTCCTG
TGTGCTACCACTTCTTGTGGCTGCTGCTGAGCGGAGCGGTTGGTTCCAAG
AAGCACAGCGTATTTTTGAAGCTGGTCAAGAGTGCATTCCTGCCATTGGC
TGTTAACGCCGTCCGTGCACGGGTTGTGTGTGTTGTTGGCTGTTCGTGAG
GGACTCGAGTTGGGTGGGTGTGATTTGAAGGCGTGTGCGGTGGCACCAGT
CACTGTGGTCCTGCCTGCGTGCACACCATTTTGTCTAGTGGTGTTTGTGT
GCAGATGTACAAAAAAGACCTCGAAGCGAGAGGTTCTCATTTTCTTGCCG
TCCCCCGCCCGGGTCTCTTACAACCTACAACAGTCTGCTGCTGTCTTTGC
AGAGCTACAGACATAAAATCCGCGTTCGCGCAGAGAGAATCTGCGGGGCG
TTCTTCCAATCAATGTTTTGTTTGGCGAGCAAGGCCTTGGCAGTCCCCTT
TTCTCCCGTCAGCATTTGTATGGTCACGAACAAGCGTCTTCGAAGTGTAC
C back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:933069..944319-
>mRNA_Ecto-sp6_S_contig10.511.1 ID=mRNA_Ecto-sp6_S_contig10.511.1|Name=mRNA_Ecto-sp6_S_contig10.511.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1719bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:933069..944319- (Ectocarpus species6 EcLAC_371) back to top