mRNA_Ecto-sp6_S_contig10.511.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match: D8LSR0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSR0_ECTSI) HSP 1 Score: 884 bits (2285), Expect = 4.640e-316 Identity = 534/572 (93.36%), Postives = 537/572 (93.88%), Query Frame = 2 Query: 86 MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHAARDSAPISVLRPFDRGYITNWEPEFEVWRRMLGRNFLNADPRDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQVLEEERESILKAQMKKRRAELNAYYAREAREAAAKARXXXXXXXXXXXXKAAHGRGTRLSTGVLVGGGNTRQRYDPTDPEGVMGLAHSKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADLLLVGSGAGKGLAMSDVCIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRYADW 1801
MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHAARDSAPIS+LRPFDRGYITNWEPEFEVWRRMLGRNFLNADPRDSRLLATEAPFGPLVLQEAANEV LEEERESILKAQMKKRRAELNA+YAREAREAAAKARXXXXXXXXXXXXKAAHGRGTRLSTGVLVGGGNTRQRYDPTDPEGVMGLAHSKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGKGLAMSDVCIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCI+RCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRYADW
Sbjct: 1 MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHAARDSAPISILRPFDRGYITNWEPEFEVWRRMLGRNFLNADPRDSRLLATEAPFGPLVLQEAANEV-------------------------LEEERESILKAQMKKRRAELNAHYAREAREAAAKARXXXXXXXXXXXXKAAHGRGTRLSTGVLVGGGNTRQRYDPTDPEGVMGLAHSKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AGKGLAMSDVCIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIERCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRYADW 546
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match: A0A836CBT8_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT8_9STRA) HSP 1 Score: 358 bits (920), Expect = 1.680e-112 Identity = 216/572 (37.76%), Postives = 281/572 (49.13%), Query Frame = 2 Query: 95 TLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHAARDSAPISVLRPFDRGYITNWEPEFEVWRRMLGRNFLNA-DPRDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQVLEEERESILKAQMKKRRAELNAYYAREAREAAAKARXXXXXXXXXXXXKAAHGRGTRLSTGVLVGGGNTRQRYDPTDPEGVMGLAHSKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADLLLVGSGAGKGLAMSDVCIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVR-PGN-PIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRYADW 1801
T+V DNGAG ++ G AG+ P HTMPNCT +IK Q ++ GDET A RD + + RP DRGY+ NWE E EVW+RM + LN +P+D LL TE PF P++L E ANEVVFEE GF ACYRCP AALS Y EQV G N+ + Y L +D +VVD GFSFTH+ FY+GRAL + +R+NVGGKLLTNYLKEV+SYRQ N+MDEF+++ +S YV+ D D+ A R + P + PIVREFVLPD K V++G+ R+ +RR E ED PQ L + +ERF +PE+LF PS+IG++Q G++E + I +CP L+P NVLLTGG P L+ERL +LR+ P + V V P P LHAWRGGS F A P+F +FAV+++EY+E GH C+ R++DW
Sbjct: 3 TVVIDNGAGSVRGGWAGEPNPRHTMPNCTAKIKNQTVVLAGDETVDAVRDKSQLVYQRPHDRGYLINWENELEVWKRMFDASHLNVQNPQDHALLFTEPPFAPIMLAETANEVVFEELGFTACYRCPPAALSVYLEQV-----------------------------------------------------------------GANSAEVYS----------------------------------------------------------------------------------------NALPPADAMVVVDMGFSFTHVFCFYKGRALQHATVRLNVGGKLLTNYLKEVLSYRQLNVMDEFDLVTQAMESTCYVAQDFKHDMLATRGLASPAHGPIVREFVLPDYKNVLQGYVRDPSEFTPEQRR---EHMAEDA--PQSLRLESERFAVPELLFKPSDIGIKQAGVAECIVQAIHKCPPFLQPVLPGNVLLTGGCANFPGLQERLQEELRSLVPWYATVRVRTPLAPHLHAWRGGSHFAAGPDFTAFAVTREEYNEQGHRFCRERFSDW 416
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match: W7TWI5_9STRA (Actin-related protein 6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWI5_9STRA) HSP 1 Score: 288 bits (737), Expect = 3.650e-85 Identity = 188/576 (32.64%), Postives = 262/576 (45.49%), Query Frame = 2 Query: 95 TLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHAARDSAPISVLRPFDRGYITNWEPEFEVWRRMLGRNFLNADPRDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQVLEEERESILKAQMKKRRAELNAYYAREAREAAAKARXXXXXXXXXXXXKAAHGRGTRLSTGVLVGGGNTRQRYDPTDPEGVMGLAHSKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADLLLVGSGAGKGLAMSDVCIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRA-------ARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGA-SPEFGSFAVSKQEYDEFGHHICKIRYAD 1798
TLV DNGA +K G AG P +PNC ++KGQ Q ++G++ + ++A + RPFDRGY+T+WE E ++W R G N DP + L+ TEAPF P L + +VVFEEFGFAAC + P+A+ S Y ++E++++ L H +G G G+ D +V+DSGFSFTH++P Y+G+A RVNVGGKLLTN LKE VSYRQWNMMDEF++M D K++L +VS + A++ +R VR + R FVLPD +T M+G+ ++V V+ QQ E + QVL+M ERF +PEVLF PS++GLRQ GL EAV ++ C LR Y N++LTGGN P +RL+ +LR P + V V P +P+ +AWRG + P+ VSK +YDE+G + R D
Sbjct: 37 TLVLDNGADRMKMGFAGDPAPRFYIPNCMAKLKGQLQWLIGEDM-DSVNNTANLQYTRPFDRGYLTDWEAEHQIWGRAFGANKAKVDPAQTHLVLTEAPFTPSPLATFSTQVVFEEFGFAACAKMPAASFSGYRYSLMEKQQQQQ---------------------------------------------------------------------------LGHQQGE-----------------------------------------------------------------------GTGV---DAVLVIDSGFSFTHVVPMYRGKAQRAGVRRVNVGGKLLTNLLKETVSYRQWNMMDEFQLMNDAKEALCFVSQNFGAEMAKIRPGGGPSRQVRTQEALRRNFVLPDFQTTMRGYVQDVQ----VQGHQQTEA------EQQVLSMEVERFVVPEVLFRPSDVGLRQGGLPEAVVEAVEACDIGLRGALYNNIVLTGGNVLFPGFAQRLHTELRIRVPEYYSVKVQAPPDPIEYAWRGAAHMAQYQPQI---FVSKSQYDEYGAEFIQERMFD 449
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match: UPI00201F7C12 (actin-related protein 6-like isoform X1 n=3 Tax=Haliotis TaxID=6452 RepID=UPI00201F7C12) HSP 1 Score: 251 bits (642), Expect = 4.300e-72 Identity = 164/571 (28.72%), Postives = 247/571 (43.26%), Query Frame = 2 Query: 98 LVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKG-QAQMVVGDETAHAARDSAPISVLRPFDRGYITNWEPEFEVWRRMLGRNFLNADPRDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQVLEEERESILKAQMKKRRAELNAYYAREAREAAAKARXXXXXXXXXXXXKAAHGRGTRLSTGVLVGGGNTRQRYDPTDPEGVMGLAHSKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADLLLVGSGAGKGLAMSDVCIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQ-----RCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
LV DNGAG K G A P +PNC + K + ++ +GD+ +D + + + PF +G++TNW+ E +VW M G++ + + + TE F QEA NEV FEE+ F A YRC ++ LS Y Q + +P GK L +VVD+G+SFTHI+P+++G+ + ++ RVNVGGKLLTN+LKE++SYRQ +MDE V+ VK+ + YV+ D AD+ AR N I R++VLPD + +G+ R QE+ + + Q++ M NERF +PE+LF+PS++G+++MG+ EA+ ++ C + ++P N+LLTGGNC +P ER+Y D+R AP +V V +P+ P +AW GG L P F V+KQE+DE GH+IC R+
Sbjct: 4 LVLDNGAGTAKVGYATDKEP-RIIPNCVTKAKNVRTRIFIGDQIDDC-KDLSGLYYMLPFQKGFLTNWDIERQVWDYMFGKDVFQVNSNECTAVVTEPCFNFASAQEAMNEVFFEEYQFNALYRCNASCLSQYKSQ------------------------------------------------------------------------KEEP--------------------------------------------------------------------------------------GKNLCT----LVVDTGYSFTHIVPYFKGKKIKEAIRRVNVGGKLLTNHLKEIISYRQLMVMDETYVINQVKEDVCYVATDFFADMNVARKRGKENTIARDYVLPDYTHIKRGYVRP-----------QEDTTGKAKDNEQLVRMNNERFAVPELLFHPSDVGIQEMGIPEAIINSLEPIQEGHCISEMKPHLLGNILLTGGNCHLPGFDERIYSDVRKLAPDEYDVTVTMPKNPAAYAWEGGCLLAKDPNFSKMVVTKQEFDEHGHNICYERF 399
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match: A0A4P6D8B9_RHOPR (Putative arp6 actin-related protein panstrongylus megistus (Fragment) n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=A0A4P6D8B9_RHOPR) HSP 1 Score: 242 bits (617), Expect = 1.170e-69 Identity = 115/259 (44.40%), Postives = 169/259 (65.25%), Query Frame = 2 Query: 1016 CIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
C+++D G+SFTHI P+ +G+ + R+ VGGKLLTN+LKE++SYRQ ++M+E VM VK+ +VS+D+ AD+ + P N IVR+++LPD + +G+ D V++ Q L M NERF +PEV+F+PS+IG+ QMGLSEAV IQ+CP R + Y N+++TGG+ P +ERLY+D+RA AP +VN+ LPE P+ +AW+GG L PEF +F V+K+EY+E G +IC R+
Sbjct: 66 CLIIDCGYSFTHIAPYIRGKKQKNAIKRIEVGGKLLTNHLKEIISYRQLHVMEETYVMNQVKEDTCFVSMDVMADMAKCKKKYPENDIVRDYILPDFTNLRRGYVHTFDKPPVVEQ--------------QKLRMNNERFSVPEVIFHPSDIGINQMGLSEAVRLSIQQCPEDARSELYKNIVVTGGSALFPGFKERLYKDVRADAPDEFDVNITLPENPVTYAWKGGKLISKDPEFYTFVVTKEEYEEEGPNICMERF 310
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match: A0A4W3GRS0_CALMI (Uncharacterized protein n=9 Tax=Chondrichthyes TaxID=7777 RepID=A0A4W3GRS0_CALMI) HSP 1 Score: 243 bits (619), Expect = 7.290e-69 Identity = 109/259 (42.08%), Postives = 172/259 (66.41%), Query Frame = 2 Query: 1016 CIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
C+VVDSG+SFTHI+P+ +G+ +++ R+NVGGKLL N+LKE++SYRQ ++MDE V+ VK+ + YVS D D+ A+ N ++R+++LPD T+ KGF K R++ + + Q+L + NERF +PE+LF+PS+IG+++MG+ EA+ +Q P + P FY N++LTGGN +P R+R+Y D+R+ P C+V+V+LPE P+ H+W GG L S +F V++ +Y+E GH IC+ ++
Sbjct: 145 CLVVDSGYSFTHIVPYCKGKKMNEGICRINVGGKLLANHLKEIISYRQLHVMDETHVINQVKEDVCYVSQDFYKDMEIAQLKGEANTVMRDYILPDFSTIKKGFC---------KPREEMVFSGKYKTSEQILRLTNERFAVPEILFHPSDIGIQEMGIPEAIVHSVQNLPEEMHPHFYNNIILTGGNTLLPGFRDRVYADVRSLTPCECDVSVLLPENPVTHSWEGGKLLSESSDFMDMVVTRDDYEENGHSICEEKF 394
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match: F1QVP8_DANRE (Actin-related protein 6 n=30 Tax=Otophysi TaxID=186626 RepID=F1QVP8_DANRE) HSP 1 Score: 242 bits (618), Expect = 1.010e-68 Identity = 112/261 (42.91%), Postives = 176/261 (67.43%), Query Frame = 2 Query: 1016 CIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQP--QVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
CIVVDSGFSFTHI+P+ +GR + + R+NVGGKLLTN+LKE++SYRQ ++MDE V+ VK+ + YVS D D+ A+ N +++++VLPD ++ KGF + + EE+ + + Q+L + NERF +PE+LF+PS+IG+++MG+ EA+ I P ++P FY N+LLTGGN P R+R+Y+++RA AP+ +V+V+LP P+ ++W GG L +P+F AV++ +Y+E GH+IC+ ++
Sbjct: 145 CIVVDSGFSFTHIVPYCRGRKMKEGICRINVGGKLLTNHLKEIISYRQLHVMDETHVINQVKEDVCYVSQDFYKDMEIAQLKGEDNTVMKDYVLPDFSSIKKGFCKPL-----------EEMNFTGKYKTGEQILRLTNERFAVPEMLFHPSDIGIQEMGIPEALVNSINNMPEEMQPHFYKNILLTGGNTLFPGFRDRVYKEVRALAPVEYDVSVVLPNNPICYSWEGGKLLAENPDFEEMAVTRDDYEENGHYICEEKF 394
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match: T1I7M9_RHOPR (Uncharacterized protein n=6 Tax=Triatominae TaxID=70999 RepID=T1I7M9_RHOPR) HSP 1 Score: 242 bits (617), Expect = 1.330e-68 Identity = 115/259 (44.40%), Postives = 169/259 (65.25%), Query Frame = 2 Query: 1016 CIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
C+++D G+SFTHI P+ +G+ + R+ VGGKLLTN+LKE++SYRQ ++M+E VM VK+ +VS+D+ AD+ + P N IVR+++LPD + +G+ D V++ Q L M NERF +PEV+F+PS+IG+ QMGLSEAV IQ+CP R + Y N+++TGG+ P +ERLY+D+RA AP +VN+ LPE P+ +AW+GG L PEF +F V+K+EY+E G +IC R+
Sbjct: 148 CLIIDCGYSFTHIAPYIRGKKQKNAIKRIEVGGKLLTNHLKEIISYRQLHVMEETYVMNQVKEDTCFVSMDVMADMAKCKKKYPENDIVRDYILPDFTNLRRGYVHTFDKPPVVEQ--------------QKLRMNNERFSVPEVIFHPSDIGINQMGLSEAVKLSIQQCPEDARSELYKNIVVTGGSALFPGFKERLYKDVRADAPDEFDVNITLPENPVTYAWKGGKLISKDPEFYTFVVTKEEYEEEGPNICMERF 392
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match: A0A8C1B8E6_CYPCA (Actin related protein 6 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1B8E6_CYPCA) HSP 1 Score: 240 bits (612), Expect = 5.030e-68 Identity = 109/259 (42.08%), Postives = 174/259 (67.18%), Query Frame = 2 Query: 1016 CIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
CIVVDSGFSFTHI+P+ +GR + + R+NVGGKLL+N+LKE++SYRQ ++MDE V+ VK+ + YVS D D+ A+ N ++R++VLPD ++ KGF + D E + + Q+L + NERF +PE+LF+PS+IG+++MG+ EA+ I P ++P FY N++LTGGN P R+R+Y+++RA AP+ +V+V+LP+ P+ + W GG L +P+F V++++Y+E GH++C+ ++
Sbjct: 134 CIVVDSGFSFTHIVPYCRGRKMKEGICRINVGGKLLSNHLKEIISYRQLHVMDETYVINQVKEDVCYVSQDFYKDMEIAQLKGEDNTVMRDYVLPDFSSIKKGFCKRGD-----------EFTGKYKTGEQILRLTNERFAVPEMLFHPSDIGIQEMGIPEALVNSINNMPEEMQPHFYKNIVLTGGNALFPGYRDRVYKEVRALAPVEYQVSVVLPQNPICYPWEGGKLLAENPDFEEMVVTREDYEENGHYVCEEKF 381
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Match: A0A672NPK4_SINGR (Actin-related protein 6-like n=5 Tax=Cyprininae TaxID=2743694 RepID=A0A672NPK4_SINGR) HSP 1 Score: 237 bits (605), Expect = 6.720e-68 Identity = 110/259 (42.47%), Postives = 173/259 (66.80%), Query Frame = 2 Query: 1016 CIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAARNVRPGNPIVREFVLPDRKTVMKGFAREVDWDARVKRRQQEELGVEDEQQPQVLTMGNERFHIPEVLFNPSNIGLRQMGLSEAVATCIQRCPAALRPQFYANVLLTGGNCAIPNLRERLYRDLRASAPIHCEVNVILPEEPMLHAWRGGSLFGASPEFGSFAVSKQEYDEFGHHICKIRY 1792
CIVVDSGFS THI+P+ +GR + + R+ VGGKLLTN+LKE++SYRQ ++MDE V+ VK+ + YVS D D+ A+ N ++RE+VLPD ++ KGF K R++ + + Q+L + NERF +PE+LF+PS+IG+++MG+ EA+ I P ++P FY N++LTGGN P R+R+Y+++RA AP+ EV+V+LP+ P+ + W GG L +P+F V++++Y+E GH++C+ ++
Sbjct: 64 CIVVDSGFSSTHIVPYCRGRKMKEGICRITVGGKLLTNHLKEIISYRQLHVMDETYVINQVKEDVCYVSQDFCKDMEIAQLKGEDNTVMREYVLPDFSSIKKGFC---------KPREEMNFTGKYKTGDQILRLTNERFAVPEMLFHPSDIGIQEMGIPEALVNSINNMPEEMQPHFYKNIVLTGGNTLFPGYRDRVYKEVRALAPVEYEVSVVLPQNPICYPWEGGKLLAENPDFEEMVVTREDYEENGHYVCEEKF 313 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig10.511.1 >prot_Ecto-sp6_S_contig10.511.1 ID=prot_Ecto-sp6_S_contig10.511.1|Name=mRNA_Ecto-sp6_S_contig10.511.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=573bp MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHAback to top mRNA from alignment at Ecto-sp6_S_contig10:933069..944319- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig10.511.1 ID=mRNA_Ecto-sp6_S_contig10.511.1|Name=mRNA_Ecto-sp6_S_contig10.511.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=11251bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:933069..944319- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig10:933069..944319- >mRNA_Ecto-sp6_S_contig10.511.1 ID=mRNA_Ecto-sp6_S_contig10.511.1|Name=mRNA_Ecto-sp6_S_contig10.511.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1719bp|location=Sequence derived from alignment at Ecto-sp6_S_contig10:933069..944319- (Ectocarpus species6 EcLAC_371)back to top |