prot_Ecto-sp13_S_contig17.4979.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17.4979.1
Unique Nameprot_Ecto-sp13_S_contig17.4979.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length275
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17.4979.1 vs. uniprot
Match: D7G6V0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6V0_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 4.490e-149
Identity = 247/275 (89.82%), Postives = 250/275 (90.91%), Query Frame = 0 
Query:    1 MISDVQNVLLEFDDSDLEELAQMTLISLRILVGYAKSTHRSLAQLCRVPYQPRRERARMAVHADPNNSNASAEA--NPAAVRVGELFQVDEDEDEEDGHEGGVLPWDPLAPRLLQEARRLAEEGKERPFTAAVVLAAALPFSXXXXXXXXXXXXXXXXXQWGAATPMGRTVGHGTKNAVELGKLGWVASKLATKQTLRLASQELDRAGGVTGLACRVGEGALWTARHPVEAAMATVAMAADAASAAYEQAVWVGDLLATVGEEVFSGPAELEDGC 273
            MISDVQNVLLEFDDSDLEELAQMTLISLRILVGYAKSTHRSLAQLCRVP+QPRRERARMAVHADPNN         NPAA RVGELFQVDE     DGHEGG LPWDPLAPRLLQEARRLAEEGKERPFTAAVVLAAALPFS XXXXXXXXXXXXX   QWGAATP+GRTVGHGTKNAVELGKLGWVASKLATKQTLRLASQELDRAGGVTGLACR GEGALWTARHPVEAAMATV MAADAASAAYEQAVW+GDLLATV EEVFS PAE EDGC
Sbjct:  175 MISDVQNVLLEFDDSDLEELAQMTLISLRILVGYAKSTHRSLAQLCRVPFQPRRERARMAVHADPNNXXXXXXXXXNPAAARVGELFQVDEXXXXXDGHEGGGLPWDPLAPRLLQEARRLAEEGKERPFTAAVVLAAALPFSGXXXXXXXXXXXXXAALQWGAATPVGRTVGHGTKNAVELGKLGWVASKLATKQTLRLASQELDRAGGVTGLACRAGEGALWTARHPVEAAMATVGMAADAASAAYEQAVWMGDLLATVREEVFSRPAEPEDGC 449
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17.4979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6V0_ECTSI4.490e-14989.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17contigEcto-sp13_S_contig17:220..2167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17.4979.1mRNA_Ecto-sp13_S_contig17.4979.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17 183..3009 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17.4979.1 ID=prot_Ecto-sp13_S_contig17.4979.1|Name=mRNA_Ecto-sp13_S_contig17.4979.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=275bp
MISDVQNVLLEFDDSDLEELAQMTLISLRILVGYAKSTHRSLAQLCRVPY
QPRRERARMAVHADPNNSNASAEANPAAVRVGELFQVDEDEDEEDGHEGG
VLPWDPLAPRLLQEARRLAEEGKERPFTAAVVLAAALPFSGAAVFLGAPV
LAGDAALQWGAATPMGRTVGHGTKNAVELGKLGWVASKLATKQTLRLASQ
ELDRAGGVTGLACRVGEGALWTARHPVEAAMATVAMAADAASAAYEQAVW
VGDLLATVGEEVFSGPAELEDGCG*
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