prot_Ecto-sp13_S_contig16985.4972.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16985.4972.1
Unique Nameprot_Ecto-sp13_S_contig16985.4972.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length187
Homology
BLAST of mRNA_Ecto-sp13_S_contig16985.4972.1 vs. uniprot
Match: D7G8B8_ECTSI (Fungal zinc cluster transcription factor, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B8_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 4.400e-105
Identity = 165/187 (88.24%), Postives = 172/187 (91.98%), Query Frame = 0
Query:    1 MATDRTKIKGVRAPLSKRPSSSRKNCDRCFQKKTKCSAPFGKDSPCRSCRKNGVDCVFSDRQKTGPKAKGAKGVSSSPGVSSVTQGGRLRRTVEEPMRAASERARSLTLQTSGHEAETTGAAYALDASEGLASRWTTAYWRLAVDANKSNSDAAQTSVAGVEANNGNRQKELRAEMHAIGDKLTVRW 187
            MATDRTKI+GVR PLSK PSS RK+CDRCFQKKTKCSAPFGKDSPCRSCRKNG DCVFSDRQKTGPKAKGAKGVSSSPGVSS TQG R+ RTVEEPMRAAS RARS T +TSGHEAETT AA ALDASEGLASRWTTAYWR AVDAN SNSDAAQTSVAGV+ANNGNRQKELRA+MHAIGD+LTV W
Sbjct:    1 MATDRTKIQGVRTPLSKHPSS-RKSCDRCFQKKTKCSAPFGKDSPCRSCRKNGADCVFSDRQKTGPKAKGAKGVSSSPGVSSATQGARVGRTVEEPMRAASGRARSSTTETSGHEAETTTAACALDASEGLASRWTTAYWRFAVDANNSNSDAAQTSVAGVKANNGNRQKELRADMHAIGDRLTVSW 186          
BLAST of mRNA_Ecto-sp13_S_contig16985.4972.1 vs. uniprot
Match: D7G8B0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B0_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 1.090e-58
Identity = 104/153 (67.97%), Postives = 119/153 (77.78%), Query Frame = 0
Query:   35 KCSAPFGKDSPCRSCRKNGVDCVFSDRQKTGPKAKGAKGVSSSPGVSSVTQGGRLRRTVEEPMRAASERARSLTLQTSGHEAETTGAAYALDASEGLASRWTTAYWRLAVDANKSNSDAAQTSVAGVEANNGNRQKELRAEMHAIGDKLTVRW 187
            +CSAPFGKD PC+SCRKNG+DCVFSDRQK+GPKA GAKGV SSP V SVT+G R+ RT+EEP R  + RA + TL TS ++AE   +A  LDASE LASRWTTAYW LA D   S  DA QTSV G +ANN +RQKELR +MH IGDKLTVRW
Sbjct:   21 RCSAPFGKDMPCQSCRKNGLDCVFSDRQKSGPKATGAKGVPSSPRVRSVTRGRRVDRTIEEPTRPGTGRASTWTLLTSLYKAENATSASTLDASEDLASRWTTAYWTLA-DHKDSTFDAEQTSVTGAKANNSSRQKELRTDMHVIGDKLTVRW 172          
BLAST of mRNA_Ecto-sp13_S_contig16985.4972.1 vs. uniprot
Match: A0A6H5KYB0_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB0_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 3.200e-58
Identity = 106/152 (69.74%), Postives = 120/152 (78.95%), Query Frame = 0
Query:   35 KCSAPFGKDSPCRSCRKNGVDCVFSDRQKTGPKAKGAKGVSSSPGVSSVTQGGRLRRTVEEPMRAASERARSLTLQTSGHEAETTGAAYALDASEGLASRWTTAYWRLAVDANKSNSDAAQTSVAGVEANNGNRQKELRAEMHAIGDKLTVR 186
            +CSAPFGKD PC+SCRKNG+DCVFSDRQK+GPKA GA GV SSPGV SVTQG    RT+EEP RAAS RA + TL TS + AE   +A  LDASE LASRWTTAYW LA D + S  DA QT+VAG  A+NG+RQKELRA+MH IGD+LTVR
Sbjct:   42 RCSAPFGKDIPCQSCRKNGLDCVFSDRQKSGPKATGATGVPSSPGVRSVTQGRGADRTIEEPTRAASGRASTWTLLTSLYTAENARSASTLDASEDLASRWTTAYWALA-DLDASTFDAEQTTVAGARADNGSRQKELRADMHVIGDRLTVR 192          
BLAST of mRNA_Ecto-sp13_S_contig16985.4972.1 vs. uniprot
Match: A0A6H5JIB6_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIB6_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 2.580e-43
Identity = 95/153 (62.09%), Postives = 101/153 (66.01%), Query Frame = 0
Query:   35 KCSAPFGKDSPCRSCRKNGVDCVFSDRQKTGPKAKGAKGVSSSPGVSSVTQGGRLRRTVEEPMRAASERARSLTLQTSGHEAETTGAAYALDASEGLASRWTTAYWRLAVDANKSNSDAAQTSVAGVEANNGNRQKELRAEMHAIGDKLTVRW 187
            KCSAPFGKD+PCRSCRKNGVDCVFSDRQ  GPKAKGA GV S PG  SVTQGG   RTV+E  RAAS RAR  +  T              +    L +R      RLAVDAN S  DAAQTSVAG  ANN +RQKELR EMHAIGD L  RW
Sbjct:   37 KCSAPFGKDNPCRSCRKNGVDCVFSDRQNPGPKAKGATGVPSLPGEISVTQGGSAGRTVKESARAASGRARPASRLTRSCRXXXXXXXXXTNC---LPTR------RLAVDANSS--DAAQTSVAGATANNSDRQKELRVEMHAIGDSLNARW 178          
BLAST of mRNA_Ecto-sp13_S_contig16985.4972.1 vs. uniprot
Match: A0A6H5JUP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUP2_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.370e-30
Identity = 62/75 (82.67%), Postives = 65/75 (86.67%), Query Frame = 0
Query:  112 SGHEAETTGAAYALDASEGLASRWTTAYWRLAVDANKSNSDAAQTSVAGVEANNGNRQKELRAEMHAIGDKLTVR 186
            SGHEAETTGA   LDASEGLASRWTTAYWRLA D N  NSDAAQTSVAG  ANNGNR+KELRA+MH IGD+LTVR
Sbjct:   30 SGHEAETTGAISVLDASEGLASRWTTAYWRLATDTN--NSDAAQTSVAGATANNGNREKELRADMHVIGDRLTVR 102          
BLAST of mRNA_Ecto-sp13_S_contig16985.4972.1 vs. uniprot
Match: D7G8B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B7_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 3.140e-8
Identity = 28/32 (87.50%), Postives = 31/32 (96.88%), Query Frame = 0
Query:  156 TSVAGVEANNGNRQKELRAEMHAIGDKLTVRW 187
            TSVAGV+ANNGNRQKELRA+MHAIGD+LTV W
Sbjct:   42 TSVAGVKANNGNRQKELRADMHAIGDRLTVSW 73          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16985.4972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G8B8_ECTSI4.400e-10588.24Fungal zinc cluster transcription factor, putative... [more]
D7G8B0_ECTSI1.090e-5867.97Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5KYB0_9PHAE3.200e-5869.74Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JIB6_9PHAE2.580e-4362.09Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JUP2_9PHAE1.370e-3082.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8B7_ECTSI3.140e-887.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 20..67
e-value: 0.0041
score: 26.3
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 26..63
e-value: 5.7E-7
score: 29.5
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 25..58
score: 9.457
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 24..123
e-value: 3.2E-7
score: 32.6
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 17..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16985contigEcto-sp13_S_contig16985:1848..3628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16985.4972.1mRNA_Ecto-sp13_S_contig16985.4972.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16985 1848..3628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16985.4972.1 ID=prot_Ecto-sp13_S_contig16985.4972.1|Name=mRNA_Ecto-sp13_S_contig16985.4972.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp
MATDRTKIKGVRAPLSKRPSSSRKNCDRCFQKKTKCSAPFGKDSPCRSCR
KNGVDCVFSDRQKTGPKAKGAKGVSSSPGVSSVTQGGRLRRTVEEPMRAA
SERARSLTLQTSGHEAETTGAAYALDASEGLASRWTTAYWRLAVDANKSN
SDAAQTSVAGVEANNGNRQKELRAEMHAIGDKLTVRW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf