prot_Ecto-sp13_S_contig16945.4955.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16945.4955.1
Unique Nameprot_Ecto-sp13_S_contig16945.4955.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length55
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16945.4955.1 vs. uniprot
Match: A0A7R9U9G0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9G0_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 1.820e-5
Identity = 19/33 (57.58%), Postives = 25/33 (75.76%), Query Frame = 0 
Query:    6 QVVSVVASDGRQRRFLWTLERQRRPPDTGKWLI 38
            Q+V +   DGR R+FLWTL++QRRPP  G WL+
Sbjct:   85 QLVEIETQDGRMRKFLWTLQQQRRPPLQGCWLV 117
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16945.4955.1 vs. uniprot
Match: A0A8J2WEJ8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WEJ8_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 3.620e-5
Identity = 18/33 (54.55%), Postives = 28/33 (84.85%), Query Frame = 0 
Query:    7 VVSVVASDGRQRRFLWTLERQRRPPDTGKWLIY 39
            +V+V  + G++R+FLWTL++QRRPPD G WL++
Sbjct:  139 MVTVQTNRGQERKFLWTLQQQRRPPDQGCWLVH 171
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16945.4955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7R9U9G0_9STRA1.820e-557.58Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A8J2WEJ8_9STRA3.620e-554.55Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16945contigEcto-sp13_S_contig16945:95..259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16945.4955.1mRNA_Ecto-sp13_S_contig16945.4955.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16945 95..259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16945.4955.1 ID=prot_Ecto-sp13_S_contig16945.4955.1|Name=mRNA_Ecto-sp13_S_contig16945.4955.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=55bp
MRCPPQVVSVVASDGRQRRFLWTLERQRRPPDTGKWLIYGVVSSDVDGKL
VMEG*
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