prot_Ecto-sp13_S_contig16899.4928.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16899.4928.1
Unique Nameprot_Ecto-sp13_S_contig16899.4928.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length82
Homology
BLAST of mRNA_Ecto-sp13_S_contig16899.4928.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 2.800e-28
Identity = 52/79 (65.82%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    3 STDRDSLLALFNATDGANWKNNNRWGTDADLSQWNGVGVNDQGRVVELDLRYNKLRGPIPPQLANLGALNLLDLSANEL 81
            STDR +L+ALFNAT GANWK N +W TDA L QW GV VND GRVV+L LRYN L+G IP QL +LGAL  L+L  N+L
Sbjct:   10 STDRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNNLKGHIPRQLGDLGALMTLNLGVNKL 88          
BLAST of mRNA_Ecto-sp13_S_contig16899.4928.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 7.470e-26
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 0
Query:    1 MASTDRDSLLALFNATDGANWKNNNRWGTDADLSQWNGVGVNDQGRVVELDLRYNKLRGPIPPQLANLGAL 71
            MASTDRD L+AL+NAT+GANW+N+  WGTDADLSQW GV VN QGRVV LDL +N LRG IPP+L NL AL
Sbjct:    1 MASTDRDVLVALYNATEGANWQNSINWGTDADLSQWFGVTVNHQGRVVRLDLSFNNLRGHIPPELGNLAAL 71          
BLAST of mRNA_Ecto-sp13_S_contig16899.4928.1 vs. uniprot
Match: A0A6H5K8T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T5_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 6.440e-24
Identity = 48/80 (60.00%), Postives = 58/80 (72.50%), Query Frame = 0
Query:    3 STDRDSLLALFNATDGANWKNNNRWGTDADLSQWNGVGVNDQGRVVELDLRYNKLRGPIPPQLANLGALNLLDLSANELI 82
            STDRD+L+AL++ATDGANWK+   W TD  L +W GV  NDQGRVV LDL  NKL G IP  L +L AL  L+L +N+LI
Sbjct:  110 STDRDALVALYDATDGANWKSKQNWNTDLPLGRWRGVEANDQGRVVGLDLPDNKLHGHIPSDLGHLSALQKLNLLSNQLI 189          
BLAST of mRNA_Ecto-sp13_S_contig16899.4928.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 7.030e-23
Identity = 49/80 (61.25%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    1 MASTDRDSLLALFNATDGANWKNNNRWGTDADLSQWNGVGVNDQGRVVELDLRYNKLRGPIPPQLANLGALNLLDLSANE 80
            MA TDRD L+AL+NATDG NWKN   W T+ADLS W+GV  +DQGRVV+L L  NKLRG IPPQL NL  + L ++  N+
Sbjct:    1 MAPTDRDVLVALYNATDGPNWKNKTNWDTNADLSDWHGVKADDQGRVVKLSLSANKLRGSIPPQLGNL--IELKEMQFND 78          
BLAST of mRNA_Ecto-sp13_S_contig16899.4928.1 vs. uniprot
Match: A0A6H5KQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP2_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.170e-22
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 0
Query:    1 MASTDRDSLLALFNATDGANWKNNNRWGTDADLSQWNGVGVNDQGRVVELDLRYNKLRGPIPPQLANLGALNLL 74
            M STDR++L++LF +T GA W   + W TDADL+ WNGV VN QGRVV LDL+YN L+G IPP+L  L AL  L
Sbjct:    1 MVSTDREALVSLFRSTGGAGWIRRDNWDTDADLATWNGVNVNVQGRVVNLDLQYNNLQGSIPPELGKLAALRAL 74          
BLAST of mRNA_Ecto-sp13_S_contig16899.4928.1 vs. uniprot
Match: D8LF65_ECTSI (Hypothetical leucine-rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF65_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 4.170e-21
Identity = 43/77 (55.84%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    1 MASTDRDSLLALFNATDGANWKNNNRWGTDADLSQWNGVGVNDQGRVVELDLRYNKLRGPIPPQLANLGALNLLDLS 77
            M++ DR +L+ALF +TDGANWK N+ W TDA+L+ W GV VND+GRVV+L L  N L GPIP  L  L  L  L +S
Sbjct:    1 MSTMDRAALIALFRSTDGANWKTNSNWDTDAELATWAGVEVNDEGRVVQLILPDNNLHGPIPEALGTLNELTHLSMS 77          
BLAST of mRNA_Ecto-sp13_S_contig16899.4928.1 vs. uniprot
Match: D7FSL6_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL6_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 5.350e-21
Identity = 44/76 (57.89%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    1 MASTDRDSLLALFNATDGANWKNNNRWGTDADLSQWNGVGVNDQGRVVELDLRYNKLRGPIPPQLANLGALNLLDL 76
            MA TDR +L+ L+ AT+G +WKNN+ W T+++LS W+GV VNDQGRVV+L L YN LRGPIPP++ +L A+  L L
Sbjct:    1 MAQTDRAALVVLYVATNGTSWKNNDNWSTESNLSLWHGVKVNDQGRVVDLSLGYNNLRGPIPPEIGDLVAMTGLYL 76          
BLAST of mRNA_Ecto-sp13_S_contig16899.4928.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 9.770e-21
Identity = 45/71 (63.38%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 MASTDRDSLLALFNATDGANWKNNNRWGTDADLSQWNGVGVNDQGRVVELDLRYNKLRGPIPPQLANLGAL 71
            MA TDR +L+AL+NAT GA WKNN  W T A LSQW+GV VN QGRVV+L L +N LRGPIP +L  L  L
Sbjct:   71 MAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNNLRGPIPKELGALSRL 141          
BLAST of mRNA_Ecto-sp13_S_contig16899.4928.1 vs. uniprot
Match: A0A6H5JFA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA4_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.830e-20
Identity = 46/73 (63.01%), Postives = 51/73 (69.86%), Query Frame = 0
Query:    1 MASTDRDSLLALFNATDGANWKNNNRWGTDADLSQWNGVGVNDQGRVVELDLRYNKLRGPIPPQLANLGALNL 73
            MA TDR+SL A +NATDGA W  N  WG+ A LS W GV  NDQGRVV+L L  N LRGPIP +L NL AL L
Sbjct:   35 MAQTDRESLTAFYNATDGAKWIRNTNWGSGAPLSDWYGVEANDQGRVVKLYLSSNNLRGPIPLELGNLSALQL 107          
BLAST of mRNA_Ecto-sp13_S_contig16899.4928.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 4.860e-20
Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 0
Query:    1 MASTDRDSLLALFNATDGANWKNNNRWGTDADLSQWNGVGVNDQGRVVELDLRYNKLRGPIPPQLANLGALNLLDLSANEL 81
            MASTDR++L+ALF +T GA W+    W TDA ++ WNGV VNDQGRVV+L L+   LRGPIPP    + AL  L L  NEL
Sbjct:    1 MASTDREALVALFRSTGGAGWRQRGNWDTDAAIAIWNGVEVNDQGRVVKLSLKLKSLRGPIPP---GISALESLSLGYNEL 78          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16899.4928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3D6_9PHAE2.800e-2865.82Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FJV1_ECTSI7.470e-2673.24LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K8T5_9PHAE6.440e-2460.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKS5_ECTSI7.030e-2361.25LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KQP2_9PHAE1.170e-2259.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF65_ECTSI4.170e-2155.84Hypothetical leucine-rich repeat protein n=1 Tax=E... [more]
D7FSL6_ECTSI5.350e-2157.89Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LFK2_ECTSI9.770e-2163.38Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JFA4_9PHAE1.830e-2063.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX69_ECTSI4.860e-2056.79LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..82
e-value: 4.6E-24
score: 86.5
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 4..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16899contigEcto-sp13_S_contig16899:183..1571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16899.4928.1mRNA_Ecto-sp13_S_contig16899.4928.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16899 183..1571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16899.4928.1 ID=prot_Ecto-sp13_S_contig16899.4928.1|Name=mRNA_Ecto-sp13_S_contig16899.4928.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=82bp
MASTDRDSLLALFNATDGANWKNNNRWGTDADLSQWNGVGVNDQGRVVEL
DLRYNKLRGPIPPQLANLGALNLLDLSANELI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf