prot_Ecto-sp13_S_contig16766.4842.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16766.4842.1
Unique Nameprot_Ecto-sp13_S_contig16766.4842.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
BLAST of mRNA_Ecto-sp13_S_contig16766.4842.1 vs. uniprot
Match: D8LFK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK0_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 3.760e-76
Identity = 131/135 (97.04%), Postives = 133/135 (98.52%), Query Frame = 0
Query:    1 MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIISGVSYEHAEGRLAALNLCSQLLRRLPEANLDQLSSVFYLALVVRLVSDQAAECRAAASTAVRTLLDRVSPAVFQELLEFTGQWFGDKDA 135
            MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQI+SGVSYEHAEGRLAALNLCSQLLRRLPE NLDQLSSVFYLALVVRLVSDQA ECRAAASTAVRTLLDRVSPAVFQELLEFTGQWFG+KDA
Sbjct:  482 MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIVSGVSYEHAEGRLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAGECRAAASTAVRTLLDRVSPAVFQELLEFTGQWFGEKDA 616          
BLAST of mRNA_Ecto-sp13_S_contig16766.4842.1 vs. uniprot
Match: D8LFJ6_ECTSI (DRIM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ6_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 7.800e-76
Identity = 131/135 (97.04%), Postives = 133/135 (98.52%), Query Frame = 0
Query:    1 MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIISGVSYEHAEGRLAALNLCSQLLRRLPEANLDQLSSVFYLALVVRLVSDQAAECRAAASTAVRTLLDRVSPAVFQELLEFTGQWFGDKDA 135
            MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQI+SGVSYEHAEGRLAALNLCSQLLRRLPE NLDQLSSVFYLALVVRLVSDQA ECRAAASTAVRTLLDRVSPAVFQELLEFTGQWFG+KDA
Sbjct: 2871 MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIVSGVSYEHAEGRLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAGECRAAASTAVRTLLDRVSPAVFQELLEFTGQWFGEKDA 3005          
BLAST of mRNA_Ecto-sp13_S_contig16766.4842.1 vs. uniprot
Match: D7G498_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G498_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 4.120e-48
Identity = 97/115 (84.35%), Postives = 99/115 (86.09%), Query Frame = 0
Query:    1 MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIISGVSYEHAEGRLAALNLCSQLLRRLPEANLDQLSSVFYLALVVRLVSDQAAECRAAASTAVRTLLDRVS 115
            MTKLAELAVTSHRPTLRATSGQTFLTFLLHY  G     F   +    VS+EHAEGRLAALNLCSQLLRRLPE NLDQLSSVFYLALVVRLVSDQAAECRAAASTAVRTLL RVS
Sbjct:  435 MTKLAELAVTSHRPTLRATSGQTFLTFLLHYSRGRNGCSFASTR----VSHEHAEGRLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAECRAAASTAVRTLLGRVS 545          
BLAST of mRNA_Ecto-sp13_S_contig16766.4842.1 vs. uniprot
Match: A0A6H5JC18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC18_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 2.940e-44
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0
Query:   44 QIISGVSYEHAEGRLAALNLCSQLLRRLPEANLDQLSSVFYLALVVRLVSDQAAECRAAASTAVRTLLDRVSPAVFQELLEFTGQWF 130
            QIISGVSYEHAEGRLAA+NLCSQLLRRLPE NLDQLSSVFYLALVVRLVSDQAAECRAAASTA+RTLLDRVSPAVFQELLEFTGQWF
Sbjct:   30 QIISGVSYEHAEGRLAAINLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAECRAAASTAIRTLLDRVSPAVFQELLEFTGQWF 116          
BLAST of mRNA_Ecto-sp13_S_contig16766.4842.1 vs. uniprot
Match: A0A835YZH5_9STRA (DRIM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH5_9STRA)

HSP 1 Score: 122 bits (307), Expect = 8.890e-30
Identity = 65/132 (49.24%), Postives = 88/132 (66.67%), Query Frame = 0
Query:    1 MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIISGVSYEHAEGRLAALNLCSQLLRRLPEANLDQLSSVFYLALVVRLVSDQAAECRAAASTAVRTLLDRVSPAVFQELLEFTGQWFGD 132
            M ++ +LAV S R +LRAT  Q FL FL+ YP+G KRL+ HL  ++ G  Y+H EGR+AAL++   L+RRLP   LD+ + +F+LAL VR V D A   RAAAS A+  LL RVS  V+ +L  +  +WFGD
Sbjct: 2830 MVEVGKLAVISPRASLRATCSQMFLDFLVTYPVGAKRLEQHLRAVLEGTGYQHEEGRVAALDMARHLIRRLPVPLLDEHAQLFFLALAVRAVGDDARAARAAASAALTQLLTRVSADVYAQLWGYAMRWFGD 2961          
BLAST of mRNA_Ecto-sp13_S_contig16766.4842.1 vs. uniprot
Match: A0A2P6TXU2_CHLSO (Small subunit processome component 20-like protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TXU2_CHLSO)

HSP 1 Score: 107 bits (267), Expect = 2.170e-24
Identity = 57/135 (42.22%), Postives = 80/135 (59.26%), Query Frame = 0
Query:    1 MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIISGVSYEHAEGRLAALNLCSQLLRRLPEANLDQLSSVFYLALVVRLVSDQAAECRAAASTAVRTLLDRVSPAVFQELLEFTGQWFGDKDA 135
            M ++ EL V S    +R+      L FLL YPLGEKRLQ HL  +++ +SYEH  GR AAL++   +L++ PE  + Q + + +L LV RLV+D +++CR      + TLL R  PA    L +F GQW G  DA
Sbjct: 2496 MNRVQELMVQSQAAPVRSACSSALLQFLLDYPLGEKRLQEHLQFLLTNLSYEHESGREAALDMLGVVLQKFPEQLVGQWAEMVFLPLVARLVNDPSSKCRQMVGACLSTLLRRAPPARRDRLAQFCGQWLGGSDA 2630          
BLAST of mRNA_Ecto-sp13_S_contig16766.4842.1 vs. uniprot
Match: W1NVA9_AMBTC (DRIM domain-containing protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1NVA9_AMBTC)

HSP 1 Score: 101 bits (252), Expect = 2.270e-22
Identity = 52/136 (38.24%), Postives = 83/136 (61.03%), Query Frame = 0
Query:    1 MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIISGVSYEHAEGRLAALNLCSQLLRRLPEANLDQLSSVFYLALVVRLVSDQAAECRAAASTAVRTLLDRVSPAVFQELLEFTGQWF-GDKDA 135
            M +++EL VTS  P ++    Q  L F + YP+G KRLQ HL+ ++S +SYEHA GR A L +   ++ + P+  +D+ S +F+  LV+RLV+D   + R    T ++ L+ R S  V Q +L+ T  WF G+K++
Sbjct: 2249 MIRVSELMVTSQVPEIQQKCSQVMLQFFMDYPIGSKRLQQHLDFLVSNLSYEHASGREAVLEMLHTIIMKFPQDIVDKQSEMFFFHLVLRLVNDSDKQIRTMVGTVIKVLIGRTSQRVLQHILKSTLSWFMGEKES 2384          
BLAST of mRNA_Ecto-sp13_S_contig16766.4842.1 vs. uniprot
Match: A0A2P6VR64_9CHLO (Small subunit processome component 20-like protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VR64_9CHLO)

HSP 1 Score: 100 bits (250), Expect = 4.230e-22
Identity = 55/135 (40.74%), Postives = 78/135 (57.78%), Query Frame = 0
Query:    1 MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIISGVSYEHAEGRLAALNLCSQLLRRLPEANLDQLSSVFYLALVVRLVSDQAAECRAAASTAVRTLLDRVSPAVFQELLEFTGQWFGDKDA 135
            M ++ EL V S    +RA      L FLL YPLGEKRLQ HL  +++   YEH  GR AAL++ + +L + PEA + Q + + +L LV RLV+D +++CRA    A+  LL R S      L+++  QW    DA
Sbjct: 2458 MNRVQELMVRSQAAPVRAACSSALLQFLLDYPLGEKRLQEHLQFLLTNAGYEHESGREAALDMLTVVLTKFPEALVSQWAEMIFLPLVARLVNDPSSKCRAMVGAALAVLLRRASAPRRDRLVQYCQQWLAGGDA 2592          
BLAST of mRNA_Ecto-sp13_S_contig16766.4842.1 vs. uniprot
Match: A0A485KCI0_9STRA (Aste57867_4062 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCI0_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.460e-21
Identity = 51/134 (38.06%), Postives = 78/134 (58.21%), Query Frame = 0
Query:    1 MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIISGVSYEHAEGRLAALNLCSQLLRRLPEANLDQLSSVFYLALVVRLVSDQAAECRAAASTAVRTLLDRVSPAVFQELLEFTGQWFGDKD 134
            M ++ E+ V S    +RA     +L FLL YPLG+KRL FH+  +++ +++ +  GRL+ALN    L+++LP   LD  +  F L LV++LV+D+AA CR  A+T +  L  R+S   F E L     W+   D
Sbjct: 2219 MIRIGEMMVQSQVANVRANCASMYLLFLLDYPLGDKRLNFHVRFVVNNLTFVYESGRLSALNCLHALVKKLPSDLLDVRAQFFLLPLVLQLVNDEAAPCRQLAATVISDLFRRISAKTFTESLALVAPWWSSPD 2352          
BLAST of mRNA_Ecto-sp13_S_contig16766.4842.1 vs. uniprot
Match: A0A1Y1HR11_KLENI (Down-regulated in metastasis family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HR11_KLENI)

HSP 1 Score: 98.2 bits (243), Expect = 3.710e-21
Identity = 50/131 (38.17%), Postives = 76/131 (58.02%), Query Frame = 0
Query:    1 MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIISGVSYEHAEGRLAALNLCSQLLRRLPEANLDQLSSVFYLALVVRLVSDQAAECRAAASTAVRTLLDRVSPAVFQELLEFTGQWFG 131
            M ++ +L V S   T+R    QT L FLL +PLG++RLQ HL  + + ++YEH  GR AAL +   +L + P   +D+    F+L LV RLV+D   +CRA     ++ L+ RV  A  Q +++F   W+G
Sbjct: 2605 MIRVGQLMVRSQDTTVRTLCSQTLLQFLLDFPLGQRRLQQHLEFLAANLAYEHPSGREAALEMIHAVLVKFPPEIVDENGDFFFLPLVTRLVNDDKQQCRAMVGAVLKVLMGRVGSAARQRMIDFAMAWYG 2735          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16766.4842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFK0_ECTSI3.760e-7697.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LFJ6_ECTSI7.800e-7697.04DRIM domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G498_ECTSI4.120e-4884.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC18_9PHAE2.940e-4496.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YZH5_9STRA8.890e-3049.24DRIM domain-containing protein n=1 Tax=Tribonema m... [more]
A0A2P6TXU2_CHLSO2.170e-2442.22Small subunit processome component 20-like protein... [more]
W1NVA9_AMBTC2.270e-2238.24DRIM domain-containing protein n=1 Tax=Amborella t... [more]
A0A2P6VR64_9CHLO4.230e-2240.74Small subunit processome component 20-like protein... [more]
A0A485KCI0_9STRA1.460e-2138.06Aste57867_4062 protein n=1 Tax=Aphanomyces stellat... [more]
A0A1Y1HR11_KLENI3.710e-2138.17Down-regulated in metastasis family protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..126
e-value: 9.7E-6
score: 27.3
NoneNo IPR availablePANTHERPTHR17695UNCHARACTERIZEDcoord: 1..132
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 10..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16766contigEcto-sp13_S_contig16766:2411..3489 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16766.4842.1mRNA_Ecto-sp13_S_contig16766.4842.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16766 2411..3504 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16766.4842.1 ID=prot_Ecto-sp13_S_contig16766.4842.1|Name=mRNA_Ecto-sp13_S_contig16766.4842.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
MTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIISGVS
YEHAEGRLAALNLCSQLLRRLPEANLDQLSSVFYLALVVRLVSDQAAECR
AAASTAVRTLLDRVSPAVFQELLEFTGQWFGDKDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold