mRNA_Ecto-sp13_S_contig16728.4819.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16728.4819.1 vs. uniprot
Match: A0A6H5JZG3_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG3_9PHAE) HSP 1 Score: 521 bits (1343), Expect = 1.340e-177 Identity = 261/297 (87.88%), Postives = 277/297 (93.27%), Query Frame = 2
Query: 59 TLVFEKAAKGDFSGSVERIDRCVEVFEGFPGVCRFFMGSHVAHIMVTALAAIGNSRSRGMYDRLRRAYNSTRFPDSTPIPPFEEWQGVSSFCNTFYCRTMELLIVGDEMGGIFAAGQKGYADHQNEGDEGEEKEQLGEDEGAFWGIGDNDIPIGPFLLSAGGGGAEFDLLPSTCKADMGSFLADCADAKCGPSAVVPRPIAGASGWAQEIRAAYPPRSTREPETGRAAHLEVESDTGMAYGGSNHAGAVTQASESMLGHGENVVEETDEDAIAAADWLDVSHALLLETERAASGKSR 949
TLVFEKAAKGDFSG+VERIDRCVEVFE FPGVCRFFMGSHVAHIMVTALAAIGNSR+RGMYDRLRRAYNSTRFPDS+PIPPFEEWQGVSSFC+TFYCRTMELLIVGDEMGG+FAAGQ ADHQNEGDEGEEKE++G D+GAFWGI DNDIP+GPFLLSAGGGGAEFDLL ST A MGSF ADCA AKCGPSAVVPRPIAGA GWAQE+R+AYP +STREPETGR AHLEVESDTGMAYG SN AGAVTQ SESMLG+GENVVEET+EDAIAAADWLDVSHALL+ETE ASG+SR
Sbjct: 379 TLVFEKAAKGDFSGAVERIDRCVEVFETFPGVCRFFMGSHVAHIMVTALAAIGNSRTRGMYDRLRRAYNSTRFPDSSPIPPFEEWQGVSSFCDTFYCRTMELLIVGDEMGGMFAAGQNARADHQNEGDEGEEKEKVGHDQGAFWGIVDNDIPVGPFLLSAGGGGAEFDLLRSTRNARMGSFPADCAGAKCGPSAVVPRPIAGAPGWAQEVRSAYPLKSTREPETGRGAHLEVESDTGMAYGRSNDAGAVTQTSESMLGNGENVVEETEEDAIAAADWLDVSHALLVETELRASGQSR 675
BLAST of mRNA_Ecto-sp13_S_contig16728.4819.1 vs. uniprot
Match: D7FH82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH82_ECTSI) HSP 1 Score: 375 bits (963), Expect = 1.440e-122 Identity = 183/209 (87.56%), Postives = 190/209 (90.91%), Query Frame = 2
Query: 59 TLVFEKAAKGDFSGSVERIDRCVEVFEGFPGVCRFFMGSHVAHIMVTALAAIGNSRSRGMYDRLRRAYNSTRFPDSTPIPPFEEWQGVSSFCNTFYCRTMELLIVGDEMGGIFAAGQKGYADHQNEGDEGEEKEQLGEDEGAFWGIGDNDIPIGPFLLSAGGGGAEFDLLPSTCKADMGSFLADCADAKCGPSAVVPRPIAGASGWAQE 685
TLVFEKAAKGDF+G+VERIDRCVEVFEGFPGVCRFFMGSHVAHIM+TALA IG+SR+RGMYDRLRRAYNSTR PDSTPIPPFEEWQGVSSFC+TFYCRTMELLIVGDEMGGIFAAGQ ADHQNEGDEGEEKE GEDEG W I DN +PIGPFL SAGGGGAE DLLPSTC ADMGSFLADCADAK GPSAVVPR I GASGW QE
Sbjct: 299 TLVFEKAAKGDFTGAVERIDRCVEVFEGFPGVCRFFMGSHVAHIMMTALAVIGDSRARGMYDRLRRAYNSTRLPDSTPIPPFEEWQGVSSFCDTFYCRTMELLIVGDEMGGIFAAGQNARADHQNEGDEGEEKEHFGEDEGTAWSIDDNGVPIGPFLASAGGGGAEVDLLPSTCNADMGSFLADCADAKFGPSAVVPRSITGASGWVQE 507
BLAST of mRNA_Ecto-sp13_S_contig16728.4819.1 vs. uniprot
Match: D8LU09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI) HSP 1 Score: 153 bits (386), Expect = 2.600e-37 Identity = 111/291 (38.14%), Postives = 148/291 (50.86%), Query Frame = 2
Query: 56 RTLVFEKAAKGDFSGSVERIDRCVEVFEGFPGVCRFFMGSHVAHIMVTALAAIGNSRSRGMYDRLRRAYNSTRFPDSTPIPPFEEWQGVSSFCNTFYCRTMELLIVGDEMGGIFAAGQKGYADHQNEGDEGEEKEQLGEDEGAFWGIGDNDIPIGPFLLSAGGGGAEFDLLPSTCKADMGSFLADCADAKCGPSAVVPRPIAGASGWAQEIRAAYPPRSTREPETGRAAHLEVESDTGMAYGGSNHAGAVTQASESM-----LGHGENVVEETDEDAIAAADWLDVSHALL 913
RTLVFEKAAKGD ++ERI RCVEVFE +PG+CR + H AHIM+ LAAIG+S +R MYDRLR +YNS R S P+PP EEWQGV +FC+ FYCR ME L+ D M A G+ G +G ++L + IG +P+ P S GGGG+ GS LA S ++P PP S+ HL+ E + + +T A ES+ L G ++E+ ++ +I A DWLD +HA+L
Sbjct: 305 RTLVFEKAAKGDRRATLERIGRCVEVFELYPGMCRCTISHHKAHIMLVCLAAIGDSSARAMYDRLRGSYNSFRPAGSLPVPPLEEWQGVGAFCDDFYCRAMEGLVASDLMKAFSAPCVDGF--DVCVGAKGTGSDKLSTCDNPEENIGT--VPVRP---SEGGGGS-------------GSTLA---------STMIP---------------VAPPASSHHAW----CHLKAEFHSDQIE---SSVALMTMADESLPRLPQLSEGSGLLEDNEDRSIFADDWLDATHAML 544
BLAST of mRNA_Ecto-sp13_S_contig16728.4819.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE) HSP 1 Score: 147 bits (371), Expect = 8.720e-35 Identity = 105/292 (35.96%), Postives = 142/292 (48.63%), Query Frame = 2
Query: 59 TLVFEKAAKGDFSGSVERIDRCVEVFEGFPGVCRFFMGSHVAHIMVTALAAIGNSRSRGMYDRLRRAYNSTRFPDSTPIPPFEEWQGVSSFCNTFYCRTMELLIVGDEMGGIFAAGQKGYADHQNEGDEGEEKEQLGEDEGAFWGIGDNDIPIGPFLLSAGGGGAEFDLLPSTCKADMGSFLADCADAKCGPSAVVPRPIAGASGWAQEIRAAYPPRSTREPETGRAA--HLEVESDTGMAYGGSNHAGAVTQASESM-----LGHGENVVEETDEDAIAAADWLDVSHALL 913
TLVFEKAAKGD ++ERI RCVEVFE +PG+CR + H AH+M+ LAAIG+S +R MYDRLR +YNS R S P+PP+EEWQG+ +FC+ FYCR ME L+ D M A G+ DI + G G++ STC D + G V P + G SG + P P + A H++ E + H +T A ES+ L G ++E+ ++ +I A DWLDV+HA+L
Sbjct: 424 TLVFEKAAKGDRQATLERIGRCVEVFELYPGMCRCTIAHHKAHVMLVCLAAIGDSSARAMYDRLRGSYNSFRPSVSRPVPPWEEWQGLGAFCDDFYCRAMEGLVASDLMKAFSAPSLDGF-----------------------------DI-----CVETQGTGSDKS---STC---------DNPEKIIGAVPVRPSEVGGGSGPTLASKTMIP---VAPPASSHHAWCHMKTEIHSDRIENSLAH---MTMADESLPRLPQLSAGGGLLEDNEDRSIFAEDWLDVTHAML 663
BLAST of mRNA_Ecto-sp13_S_contig16728.4819.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE) HSP 1 Score: 134 bits (338), Expect = 2.240e-30 Identity = 103/301 (34.22%), Postives = 142/301 (47.18%), Query Frame = 2
Query: 62 LVFEKAAKGDFSGSVERIDRCVEVFEGFPGVCRFFM-GSHVAHIMVTALAAIGNSRSRGMYDRLRRAYNSTRFPDSTPIPPFEEWQGVSSFCNTFYCRTMELLIVGDEMGGIFAAGQKGYADHQNEGDEGEEKEQLGEDEGAFWGIGDNDIPIGPFLLSAGGGGAEFDLLPSTCKADMGSFLADCADAKCGPSAVVPRPIAGASGWAQEIRAAYPPRSTREPETGRA---AHLEV-ESDTGMAYG--GSNHAGAVTQASESMLGHGE-----NVVEETDEDAIAAADWLDVSHALLLETER 928
L +KA KGD G++ER+ CVEVFE +PGVCR M HV+H ++ ALAAI +SR+R +YDRLR YN +R DS P PP EEW+G+S+FC+ F CR E +I + ++G + +E DE I +P G L +A G+ + DA C +P++ S W + P P G + +H+ E D G G G +G V E L E V EET +D I ADWLDV+HA+L E ++
Sbjct: 414 LALQKAGKGDAGGALERLRHCVEVFERYPGVCRCMMLWCHVSHSILGALAAINDSRARELYDRLRNVYNPSRSSDSLPAPPLEEWRGMSAFCDDFQCRCFEGIIASQALSVFSTPTLCASNCAGSQGAQCKEDYLQAADEQHHTSI----VPAGVILENA-----------------TGTMM----DAPCSNG---DKPMSSTSSWELNQK----PAPQMSPPVGPSLSTSHVHCCEPDRGAVEGCGGGGVSGVVAPVPEMSLRWPELRQVDGVSEETGDDTIVTADWLDVTHAMLGEIDQ 682
BLAST of mRNA_Ecto-sp13_S_contig16728.4819.1 vs. uniprot
Match: D8LU28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU28_ECTSI) HSP 1 Score: 129 bits (324), Expect = 7.820e-29 Identity = 103/309 (33.33%), Postives = 148/309 (47.90%), Query Frame = 2
Query: 59 TLVFEKAAKGDFSGSVERIDRCVEVFEGFPGVCRFFMGSHVAHIMVTALAAIGNSRSRGMYDRLRRAYNSTRFPDSTPIPPFEEWQGVSSFCNTFYCRTMELLIVGDEMGGIFAAGQKGYADHQNEGDEGEEKEQLGEDEGAFWGIGDNDIPIGPFLLSAGGGGAEFDLLPSTCKADMGSFLADCADAKCGPSAVVPRPIAGASGWAQEIRAAYPPRSTREPETGRA---AHLEV------ESDTGMAY------GGSNHAGAVTQASE-----SMLGHGENVVEETDEDAIAAADWLDVSHALLLETE 925
TL ++KAA GD G++ER +CV+VFE +PGVCR H+AH ++ +LAAI +SR+ G+Y+RLR YN +R S P PP EEW+G+S+FC+ F CR E +I +F+A ++ +E EE DE ++S G +T + GS + DA P +P+A W + P P G + +HL ESDT + GG +G V Q + +LG + EE +D IAAADWLDV+HA+L T+
Sbjct: 281 TLAYQKAANGDAGGALERFGQCVDVFERYPGVCRCMFWCHIAHGILGSLAAIDDSRAGGLYNRLRDVYNPSRPSSSLPAPPLEEWRGISAFCDDFQCRLTEGMIASQAFS-VFSAPTHCTSNCTGSQNECEEASLQFVDE-----------EQNSSMVSVG----------ATPEVATGSIM----DA---PRTNGDKPMASNYSWELNLE----PTPQTSPTVGPSLSPSHLHCKPVRGGESDTDVLNSAVVECGGGVLSGLVGQVPDVSLTSPLLGDIDGAREEIWDDTIAAADWLDVTHAMLDATD 556
BLAST of mRNA_Ecto-sp13_S_contig16728.4819.1 vs. uniprot
Match: D8LU06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU06_ECTSI) HSP 1 Score: 123 bits (309), Expect = 1.230e-28 Identity = 55/101 (54.46%), Postives = 74/101 (73.27%), Query Frame = 2
Query: 62 LVFEKAAKGDFSGSVERIDRCVEVFEGFPGVCRFFMGSHVAHIMVTALAAIGNSRSRGMYDRLRRAYNSTRFPDSTPIPPFEEWQGVSSFCNTFYCRTMEL 364
L+F KAA+GD ++ERI RCVEV E +PG+CR +G H+AHI + +LAA+G SR++ MYDRLR +YNS R S P+PP EEW V +FC+ +CR M+L
Sbjct: 119 LIFTKAAQGDLHAALERIGRCVEVCERYPGLCRSTVGCHLAHIALVSLAAVGGSRAQTMYDRLRGSYNSCRPAGSRPVPPLEEWDRVDAFCDDSFCRAMDL 219
BLAST of mRNA_Ecto-sp13_S_contig16728.4819.1 vs. uniprot
Match: A0A6H5JUG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG6_9PHAE) HSP 1 Score: 128 bits (321), Expect = 3.080e-28 Identity = 56/103 (54.37%), Postives = 76/103 (73.79%), Query Frame = 2
Query: 59 TLVFEKAAKGDFSGSVERIDRCVEVFEGFPGVCRFFMGSHVAHIMVTALAAIGNSRSRGMYDRLRRAYNSTRFPDSTPIPPFEEWQGVSSFCNTFYCRTMELL 367
TL F K GD G++ER++RCVEVFEGFPG+ RF MG+H+AH+M++ A++G+SR G+Y+RLR A N TR S PP EEWQG+S+FC+ CR++E L
Sbjct: 373 TLFFNKTVSGDNKGALERLERCVEVFEGFPGLTRFAMGNHMAHVMLSVAASVGDSRDGGLYNRLRNACNLTRPQGSLAFPPLEEWQGISAFCDNVPCRSIEAL 475
BLAST of mRNA_Ecto-sp13_S_contig16728.4819.1 vs. uniprot
Match: D8LU24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU24_ECTSI) HSP 1 Score: 127 bits (319), Expect = 5.450e-28 Identity = 104/302 (34.44%), Postives = 146/302 (48.34%), Query Frame = 2
Query: 62 LVFEKAAKGDFSGSVERIDRCVEVFEGFPGVCRFFM-GSHVAHIMVTALAAIGNSRSRGMYDRLRRAYNSTRFPDSTPIPPFEEWQGVSSFCNTFYCRTMELLIVGDEMGGIFAAGQKGYADHQNEGDEGEEKEQLGEDEGAFWGIGDNDIPIGPFLLSAGGGGAEFDLLPSTCKADMGSFLADCADAKCGPSAVVPRPIAGASGWAQEIRAAY-------PPRSTRE-----PETGRAAHLEVESDTGMAYGGSNHAGAVTQASESMLGHGE-----NVVEETDEDAIAAADWLDVSHALL 913
L F+KA KGD G++ER+ CVE FE +PGVCR M H +H ++ ALAAI +SR+R +Y+RLR YN +R P PP EEW G SSFC+ F CR E I+ +F A +++ ++ ++ ED + + D + ++SAG ++P +GS + DA C +P+A S W A P ST P+TG + ++ S GG AG V + L E V EET +D IAAADWLDV+HA+L
Sbjct: 341 LAFQKAGKGDAGGALERLGHCVEAFERYPGVCRCMMLWCHASHSILGALAAIKSSRARELYNRLRDVYNPSRPASFLPAPPLEEWHGTSSFCDDFQCRCFE-GIIASRARNLFPAPSDCTSNNTDQ-----QQTNCTED---YLEVVDEEHDGS--IISAG-------VIPEKA---IGSIM----DAPCSNG---DKPMASTSLWELNQEPAPQMGPPVGPSLSTSHVHCCGPDTGGGSGTDIYSGAVEGCGGGVLAGLVAPVPDMSLRLPELTQVDGVPEETGDDTIAAADWLDVTHAML 614
BLAST of mRNA_Ecto-sp13_S_contig16728.4819.1 vs. uniprot
Match: D8LU16_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU16_ECTSI) HSP 1 Score: 125 bits (313), Expect = 2.280e-27 Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 2
Query: 59 TLVFEKAAKGDFSGSVERIDRCVEVFEGFPGVCRFFMGSHVAHIMVTALAAIGNSRSRGMYDRLRRAYNSTRFPDSTPIPPFEEWQGVSSFCNTFYCRTMELLIVGDEM 385
TLVF K AKGD + ++ER+ RCV VFE +PG+C MG H AHI++ LAAI + R+R MYD LR YNS R S P+PP EEW GV FC+ YCR +E L+ + +
Sbjct: 300 TLVFVKGAKGDLNAALERVGRCVAVFERYPGLCSGTMGYHNAHIVLVCLAAISDPRARAMYDSLRATYNSFRPAGSLPVPPLEEWHGVDVFCDDCYCRAIEQLVASEHI 408 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16728.4819.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16728.4819.1 >prot_Ecto-sp13_S_contig16728.4819.1 ID=prot_Ecto-sp13_S_contig16728.4819.1|Name=mRNA_Ecto-sp13_S_contig16728.4819.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp MGSHVAHIMVTALAAIGNSRSRGMYDRLRRAYNSTRFPDSTPIPPFEEWQback to top mRNA from alignment at Ecto-sp13_S_contig16728:2..3020+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16728.4819.1 ID=mRNA_Ecto-sp13_S_contig16728.4819.1|Name=mRNA_Ecto-sp13_S_contig16728.4819.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3019bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16728:2..3020+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16728:2..3020+ >mRNA_Ecto-sp13_S_contig16728.4819.1 ID=mRNA_Ecto-sp13_S_contig16728.4819.1|Name=mRNA_Ecto-sp13_S_contig16728.4819.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=792bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16728:2..3020+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |