prot_Ecto-sp13_S_contig16708.4807.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16708.4807.1
Unique Nameprot_Ecto-sp13_S_contig16708.4807.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length551
Homology
BLAST of mRNA_Ecto-sp13_S_contig16708.4807.1 vs. uniprot
Match: A0A6H5KPE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPE9_9PHAE)

HSP 1 Score: 689 bits (1778), Expect = 2.520e-240
Identity = 488/559 (87.30%), Postives = 499/559 (89.27%), Query Frame = 0
Query:    2 YRLVVWGQVEAQRRAKKAAQTAADCALRDLSTARRLISGFEKEKSRISGNAAALNARLSTTTEEASAAKAGLRLLVRACLPLLERCRLLAEHKRLLAKWHGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VLIIDGLRSLVDALDQDGDEEEGQAGRGLGSDNRREGFPSPASRTHGTPRRPGSCEGGGGCGEVGDTAGNFHYHQHHDKRQQRRPLVSLRATCIAAVAVQRLVRLAACRASRRGAXXXXXXXXXXXXXXXXXXXXXXXGGRPGLSRQGDVGIGEDIISLGPRGSGG-SSGGGVPMLLDTQVVSPGSMSLALTSLLADHSKDGTGDPSQAGGLACRSDCGGXXXXXXSDGERCMGLLGALVVVDAGDVSSAA----------TGEWLGRG--GTAVVTGAARDAAGRTSLLQVLAGGQVGHWRRVEKRGLVPWAGRGGGSGSDPRLLGGASRVVASRCARHHGPEIWKAWQERAAAEEACSLLGATRRGTAALARLAGEAERRLLESEAGRLQAKAEV 545
            +RLVVWGQVEAQRRAKKAAQTAADCALRDLSTARRLISGFE+EKSRISGNAAALNARLST TEEASAAKAGLRLLVRACLPLLERCRLLAEHKRLLAKWHGS+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VL+IDGLRSLVDAL QDGDEEEGQAG GLGS+N R G P+PASRTHGTPRRPGSCEGGGGCGEVGD AGN HYHQ+HDKRQQRRPLVSLRATCIAAVAVQRLV            XXXXXXXXXXXXXXXXXXXX   GGRP  S  GD GI EDII LGPRGSGG SSGGGVPMLLDTQVVSP SMSLAL SLLAD SKDGTGDPSQAG +ACRSD G XXXXXX DGERCMGLLGALVVVDAG+VSS             GEW  RG  GTAVVTGAARDAAGRTSLLQVLAGGQVGHWRRVEKRGLVPWAG GGGSGSDPRLLGGASRVVASRCARHHGPE+WKA QERAAAEEACSLLGATRRGTAALARLAGEAERRLLESEAGRLQAKAE+
Sbjct:   13 HRLVVWGQVEAQRRAKKAAQTAADCALRDLSTARRLISGFEEEKSRISGNAAALNARLSTITEEASAAKAGLRLLVRACLPLLERCRLLAEHKRLLAKWHGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLMIDGLRSLVDALRQDGDEEEGQAGGGLGSNNGRGGSPAPASRTHGTPRRPGSCEGGGGCGEVGDMAGNVHYHQNHDKRQQRRPLVSLRATCIAAVAVQRLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAGGRPSPSPHGDAGIREDIIPLGPRGSGGGSSGGGVPMLLDTQVVSPASMSLALMSLLADLSKDGTGDPSQAGCVACRSDGGXXXXXXXXDGERCMGLLGALVVVDAGNVSSXXXXXXXXXXXXAGEWFTRGDKGTAVVTGAARDAAGRTSLLQVLAGGQVGHWRRVEKRGLVPWAGSGGGSGSDPRLLGGASRVVASRCARHHGPEVWKARQERAAAEEACSLLGATRRGTAALARLAGEAERRLLESEAGRLQAKAEI 571          
BLAST of mRNA_Ecto-sp13_S_contig16708.4807.1 vs. uniprot
Match: D8LN18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN18_ECTSI)

HSP 1 Score: 685 bits (1768), Expect = 9.510e-234
Identity = 480/547 (87.75%), Postives = 492/547 (89.95%), Query Frame = 0
Query:    9 QVEAQRRAKKAAQTAADCALRDLSTARRLISGFEKEKSRISGNAAALNARLSTTTEEASAAKAGLRLLVRACLPLLERCRLLAEHKRLLAKWHGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VLIIDGLRSLVDALDQDGDEEEGQAGRGLGSDNRREGFPSPASRTHGTPRRPGSCEGGGGCGEVGDTAGNFHYHQHHDKRQQRRPLVSLRATCIAAVAVQRLVRLAACRASRRGAXXXXXXXXXXXXXXXXXXXXXXX-GGRPGLSRQGDVGIGEDIISLGPRGSGGSSGGG-VPMLLDTQVVSPGSMSLALTSLLADHSKDGTGDPSQAGGLACRSDCGGXXXXXXSD---GERCMGLLGALVVVDAGDVSSAA-TGEWLGRG--GTAVVTGAARDAAGRTSLLQVLAGGQVGHWRRVEKRGLVPWAGRGGGSGSDPRLLGGASRVVASRCARHHGPEIWKAWQERAAAEEACSLLGATRRGTAALARLAGEAERRLLESEAGRLQAKAEV 545
            +VEAQRRAK+AAQTAADCALRDLSTARRLIS FEKEK+RISGNA ALNARLST TEEASAAK GLRLL RAC PLLERCRLLAEHKRLLAKWH S+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        VLIIDGLRSLVDAL QDGDEEEGQAGRGLGS+N     P+PASR HGTPRRPGS EGGGGCGEVGDTAGN H HQHHDKRQQRRPLVSLRATCIAAVAVQRLVRLAACRASRR AXXXXXXXXXXXXXXXXXXXXX   GGRP  SR GD GIGE II LGPRGSGG SGGG VPMLLDTQVVSPGSMSLAL SLL DHSKDGTGDPSQAGG+ACR D G XXXXXX     GERCMGLLGALVVVDAG++SSAA TGEW GRG  GTAV TGAARDAAGRTSLL+VLAGGQVGHWRRVEKRGLVPWAG GGGSGSDPRLLGGASRVVASRCARHHG ++WKAWQERAAAEEACSLLGATRRGTAALARLAGEAERRLLESEAGRLQAKAEV
Sbjct:  498 EVEAQRRAKRAAQTAADCALRDLSTARRLISDFEKEKARISGNAVALNARLSTVTEEASAAKNGLRLLARACWPLLERCRLLAEHKRLLAKWHDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGSQQPTMVLIIDGLRSLVDALSQDGDEEEGQAGRGLGSENGGGDPPAPASRAHGTPRRPGSSEGGGGCGEVGDTAGNVHNHQHHDKRQQRRPLVSLRATCIAAVAVQRLVRLAACRASRREAXXXXXXXXXXXXXXXXXXXXXTAAGGRPSPSRHGDAGIGEAIIPLGPRGSGGGSGGGGVPMLLDTQVVSPGSMSLALMSLLGDHSKDGTGDPSQAGGVACRGDGGXXXXXXXXXXXXGERCMGLLGALVVVDAGNISSAAATGEWFGRGFEGTAVETGAARDAAGRTSLLEVLAGGQVGHWRRVEKRGLVPWAGSGGGSGSDPRLLGGASRVVASRCARHHGQDVWKAWQERAAAEEACSLLGATRRGTAALARLAGEAERRLLESEAGRLQAKAEV 1044          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16708.4807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPE9_9PHAE2.520e-24087.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN18_ECTSI9.510e-23487.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16708contigEcto-sp13_S_contig16708:816..3315 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16708.4807.1mRNA_Ecto-sp13_S_contig16708.4807.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16708 816..3315 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16708.4807.1 ID=prot_Ecto-sp13_S_contig16708.4807.1|Name=mRNA_Ecto-sp13_S_contig16708.4807.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=551bp
MYRLVVWGQVEAQRRAKKAAQTAADCALRDLSTARRLISGFEKEKSRISG
NAAALNARLSTTTEEASAAKAGLRLLVRACLPLLERCRLLAEHKRLLAKW
HGSAAAADAAAAARRGGGAVIGAAARRSGARGRGSGVGGDAASAEAAAAA
AAAAGSQQPTTVLIIDGLRSLVDALDQDGDEEEGQAGRGLGSDNRREGFP
SPASRTHGTPRRPGSCEGGGGCGEVGDTAGNFHYHQHHDKRQQRRPLVSL
RATCIAAVAVQRLVRLAACRASRRGAARAAAAATTDSHTDLPPPPPPPPG
GRPGLSRQGDVGIGEDIISLGPRGSGGSSGGGVPMLLDTQVVSPGSMSLA
LTSLLADHSKDGTGDPSQAGGLACRSDCGGGGGGGSSDGERCMGLLGALV
VVDAGDVSSAATGEWLGRGGTAVVTGAARDAAGRTSLLQVLAGGQVGHWR
RVEKRGLVPWAGRGGGSGSDPRLLGGASRVVASRCARHHGPEIWKAWQER
AAAEEACSLLGATRRGTAALARLAGEAERRLLESEAGRLQAKAEVSLFHR
*
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