mRNA_Ecto-sp13_S_contig16630.4753.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: D7FRN4_ECTSI (Putative hydrolase (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN4_ECTSI) HSP 1 Score: 440 bits (1131), Expect = 4.910e-149 Identity = 214/229 (93.45%), Postives = 219/229 (95.63%), Query Frame = 1
Query: 79 MLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVPNFFCVGTPAQLRAFLGLVQKGVVAPQRKTRVFFDLD 765
MLFWLLDNLKLKPEDTLWVG+QQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMS AEIRRKSISLDCDTIYFSDVLG FRAC GCGSSFYFEDEGDKPIFSYI FEP TDKIV+IREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVG AGEFYTSSIIE MIQAGQKFVGIHVP+FFCVGTPAQLR+FLGLVQKG V P+RKTRVFFDLD
Sbjct: 1 MLFWLLDNLKLKPEDTLWVGVQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSSAEIRRKSISLDCDTIYFSDVLGSFRACASGCGSSFYFEDEGDKPIFSYIEFEPSTDKIVYIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGKAGEFYTSSIIERMIQAGQKFVGIHVPDFFCVGTPAQLRSFLGLVQKGGVVPRRKTRVFFDLD 229
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A818V4J0_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A818V4J0_9BILA) HSP 1 Score: 243 bits (621), Expect = 8.060e-77 Identity = 126/257 (49.03%), Postives = 168/257 (65.37%), Query Frame = 1
Query: 19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEP-----GTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVP--NFFCVGTPAQLRAFLGLVQKGVVA-PQRKTRVFFDLD 765
RFS E YR PKPLINIVGRPMLFWLLDNL K +D +++G+ + LE ++ + ++ EYP+ V IDF+TRGA ETLFIMLQ ++ + K+ISLDCDTIYF +L FR P +SF+FED G KP+FSY+ + G + +REK IS HANTGAYAF L+ C ++LD VG++GE+YT++II+ M++ ++FVGI V +F CVG P QL FL ++ + P RK R FDLD
Sbjct: 13 RFSKENYRFPKPLINIVGRPMLFWLLDNLDTKEDDIIYLGLLESLEKQFNLVQTIKMEYPNRKFESVVIDFETRGAVETLFIMLQFLNPDRLDCKTISLDCDTIYFQPILEKFRRLPSEINASFFFEDNGGKPVFSYLKLDENLTDEGYHSVTDVREKIMISTHANTGAYAFRSARILKQYCIQLLDEAVGSSGEYYTTNIIKLMLEDQERFVGIEVNINDFVCVGIPVQLIDFLKKLKTDQHSYPVRKMRFCFDLD 269
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: H1VD75_COLHI (Nucleotidyl transferase n=1 Tax=Colletotrichum higginsianum (strain IMI 349063) TaxID=759273 RepID=H1VD75_COLHI) HSP 1 Score: 243 bits (621), Expect = 4.430e-76 Identity = 130/260 (50.00%), Postives = 172/260 (66.15%), Query Frame = 1
Query: 19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEP---GTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLD--NPVGN-AGEFYTSSIIEGMIQAGQKFVGIHVP--NFFCVGTPAQLRAFLGLVQ---KGVVAPQRKTRVFFDLD 765
RF+ EGYR PKPLINIVGRPML WL+DNL LKP DTLW+ I +E++ E+ I + K + +D R++ + QT+GA+ETL+I+ Q M+ + RK++SLDCDTIY++DVL R P+G G FYF D GDKPIFSYI EP G ++IV I+EK+AIS ANTGAY FP +L+ E LD P G+ GE+YTS +I MIQ G ++G+ V +F VGTP QL+ L L++ + +K R FDLD
Sbjct: 39 RFAKEGYRYPKPLINIVGRPMLLWLIDNLSLKPGDTLWMAINEEVDDEFRIGQLVSKTFSKIDFRLLRLRHQTKGASETLYIVTQSMTKKHLERKTVSLDCDTIYWADVLQDIRNMPKGHGGCFYFPDVGDKPIFSYIKTEPTKDGLERIVDIQEKKAISNKANTGAYVFPSAGQLKSWAAENLDMKRPDGSEVGEYYTSQMIALMIQNGVPYLGMPVSTKDFSVVGTPEQLKDLLKLLKTDTSNLPIKLKKRRFCFDLD 298
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A814WXJ1_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814WXJ1_9BILA) HSP 1 Score: 248 bits (632), Expect = 6.610e-75 Identity = 129/250 (51.60%), Postives = 164/250 (65.60%), Query Frame = 1
Query: 19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDKIVH-IREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVPNFFCVGTPAQLRAFLGLVQKGVVAPQRKTRVFFDLD 765
RF EGYR PKPLINIVGRPMLF+LLD LKL+PED L+V + Q +E E+ + A+++KEYP LD+ VV + FQTRGAAETLF++LQ +SF IR +S ++ D FRA C FYFED G+KP+FSY+ E D +VH ++EK IS HANTGAY F G+ L +C VLD V +GE+Y SS+I M+ G KF+GI V +F C+GTP QL+ FL V +K R FDLD
Sbjct: 7 RFQTEGYRFPKPLINIVGRPMLFFLLDRLKLEPEDKLFVALSQGIEDEFHVGAQIKKEYPQLDLHVVILKFQTRGAAETLFVILQSVSFNHIRTLGVSN-----FYLDGFCTFRASESSC--CFYFEDRGNKPVFSYL--EMDEDNVVHAVKEKVPISTHANTGAYGFSSGNALLSSCVRVLDVGVDTSGEYYISSVITQMLSEGLKFIGIFVEDFSCIGTPWQLKEFLSKVTHNPSLITKKRRFCFDLD 247
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A816EGU7_9BILA (Hypothetical protein n=4 Tax=Rotaria TaxID=231623 RepID=A0A816EGU7_9BILA) HSP 1 Score: 247 bits (630), Expect = 9.150e-74 Identity = 130/257 (50.58%), Postives = 165/257 (64.20%), Query Frame = 1
Query: 19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDK-----IVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVP--NFFCVGTPAQLRAFLG-LVQKGVVAPQRKTRVFFDLD 765
RFS E YR PKPLI IVGRPMLFWLLD+L K +D +++GI LE ++ I L+ EYP + IDF+TRGAAETLFI+LQ M +RRK+ISLDCDTIYF ++ FR P +SF+FED G KPI+SY+ + ++ + + EK IS HANTGAYAF L+ C +LD VG++GE+YT+SII+ M+ G++FVGIHV F CVGTP QL FL L K P + R FDLD
Sbjct: 13 RFSKENYRFPKPLIKIVGRPMLFWLLDHLDTKEDDVIYIGILVNLEKQFDIIQTLKMEYPKKTFEGIIIDFETRGAAETLFIILQSMEPDRLRRKTISLDCDTIYFKPIIEDFRRLPGNLNASFFFEDNGGKPIYSYLKLDENINEQACFTVRDVCEKIMISNHANTGAYAFHSASILKQFCIRLLDEAVGHSGEYYTTSIIKLMMDHGERFVGIHVSLDEFTCVGTPDQLNHFLKRLKTKESSIPVPRIRFCFDLD 269
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A815X3D1_ADIRI (Hypothetical protein n=4 Tax=Adineta ricciae TaxID=249248 RepID=A0A815X3D1_ADIRI) HSP 1 Score: 246 bits (628), Expect = 1.610e-73 Identity = 131/258 (50.78%), Postives = 163/258 (63.18%), Query Frame = 1
Query: 19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDKIVH------IREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVP--NFFCVGTPAQLRAFLG-LVQKGVVAPQRKTRVFFDLD 765
RF+ E YR PKPLI IVGRPMLFWL+D L LK +D +++GI + LE ++A+ LR EYP + V +DF TRGAAETLFIMLQ + + RK+ISLDCDTIYF +L FR P +SFYFED G KPIFSY+ FE H + EK IS HANTGAYAF ++ C ++LD VG +GE+YT+ II+ M+ + FVG+ V +F CVGTP QL+ FL L K RK R FDLD
Sbjct: 13 RFTRENYRFPKPLIKIVGRPMLFWLIDYLDLKEDDIIYLGITEALEKQFALTQTLRVEYPKQTFKSVVLDFDTRGAAETLFIMLQSIDDDRVERKTISLDCDTIYFKPILERFRQLPAHLNASFYFEDHGGKPIFSYLKFEHEPSDPEHPPVVTDVAEKIMISTHANTGAYAFSSTSIMKEYCIQLLDEAVGESGEYYTTHIIKLMLTDKEPFVGLPVQTDDFVCVGTPDQLKTFLKRLKSKDTPVQVRKMRFCFDLD 270
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A7S3G4H6_9EUKA (Hypothetical protein n=4 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4H6_9EUKA) HSP 1 Score: 244 bits (624), Expect = 4.510e-73 Identity = 121/251 (48.21%), Postives = 166/251 (66.14%), Query Frame = 1
Query: 19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPS-LDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVPNFFCVGTPAQLRAFLGLVQKG-VVAPQRKTRVFFDLD 765
RF +GY +PKP++ +VGRPM+FWLLDNL L+ +DT+W G+ +EL E+ ++ + ++ + ++F TRGAAETLF +L M E+ RK+ISLDCDT Y +DVLG FR G G+ F FED G PI+SY + + V I EK IS HANTGAYAFP L+ +C +V+D+ VGN GE+YTSS+++ +++ G G+HV +F C+GTP QL AFL LV G +AP+R R FDLD
Sbjct: 26 RFRKKGYNVPKPMVRVVGRPMIFWLLDNLSLEGQDTVWFGLSKELRDEHVFKQQVSNLLKGKVGVKFIDLEFDTRGAAETLFAILSQMDERELSRKTISLDCDTFYVTDVLGKFRQVAPGEGAIFVFEDAGSAPIYSYTVLDE-SGSAVRIAEKLKISNHANTGAYAFPSAKSLKDSCEKVIDSSVGNVGEYYTSSVVQQLLKDGIIVRGVHVDDFHCLGTPEQLDAFLALVADGSFIAPRR--RFCFDLD 273
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A0D2WPY4_CAPO3 (NTP_transferase domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WPY4_CAPO3) HSP 1 Score: 243 bits (621), Expect = 1.310e-72 Identity = 120/250 (48.00%), Postives = 163/250 (65.20%), Query Frame = 1
Query: 19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKL-KPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVPNFFCVGTPAQLRAFLGLVQKGVVAPQRKTRVFFDLD 765
RF + YR PKPLINIVG PML+WLLDNL + + D +W+ + +E + R+ K+YP I VV++DF+TRG AET+F++LQHM +++R++I LDCDTIYFSDVL FR G +SF FED+ +P+FSYI + I+ I+EK IS ANTGAY F G+ L+ C E LD V + GE+YTS+II M+ Q F G++V +F+CVG+P QL FL ++ G + R R FDLD
Sbjct: 13 RFERDNYRFPKPLINIVGHPMLYWLLDNLSIDRSNDVIWMAVMTSVENIFHFKKRVCKQYPKHRINVVTLDFETRGPAETVFVVLQHMKPDDLKRRTICLDCDTIYFSDVLADFRRLDPGVNASFCFEDKIGQPVFSYIAMDD-QQNILDIKEKMPISTWANTGAYGFASGELLKQFCVEQLDTSVDSTGEYYTSAIIRLMLSQKQPFKGVNVSDFYCVGSPDQLTDFLHNIRIGKIKSPRTMRFCFDLD 261
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A819T6J3_9BILA (Hypothetical protein n=6 Tax=Adineta steineri TaxID=433720 RepID=A0A819T6J3_9BILA) HSP 1 Score: 243 bits (621), Expect = 1.870e-72 Identity = 126/257 (49.03%), Postives = 168/257 (65.37%), Query Frame = 1
Query: 19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEP-----GTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVP--NFFCVGTPAQLRAFLGLVQKGVVA-PQRKTRVFFDLD 765
RFS E YR PKPLINIVGRPMLFWLLDNL K +D +++G+ + LE ++ + ++ EYP+ V IDF+TRGA ETLFIMLQ ++ + K+ISLDCDTIYF +L FR P +SF+FED G KP+FSY+ + G + +REK IS HANTGAYAF L+ C ++LD VG++GE+YT++II+ M++ ++FVGI V +F CVG P QL FL ++ + P RK R FDLD
Sbjct: 13 RFSKENYRFPKPLINIVGRPMLFWLLDNLDTKEDDIIYLGLLESLEKQFNLVQTIKMEYPNRKFESVVIDFETRGAVETLFIMLQFLNPDRLDCKTISLDCDTIYFQPILEKFRRLPSEINASFFFEDNGGKPVFSYLKLDENLTDEGYHSVTDVREKIMISTHANTGAYAFRSARILKQYCIQLLDEAVGSSGEYYTTNIIKLMLEDQERFVGIEVNINDFVCVGIPVQLIDFLKKLKTDQHSYPVRKMRFCFDLD 269
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: R1EYU7_EMIHU (NTP_transf_3 domain-containing protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EYU7_EMIHU) HSP 1 Score: 232 bits (591), Expect = 3.970e-72 Identity = 118/249 (47.39%), Postives = 152/249 (61.04%), Query Frame = 1
Query: 22 FSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEY-AIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVPNFFCVGTPAQLRAFLGLVQKGVVAPQRKTRVFFDLD 765
F GY PKPLI I GRPMLF +LDNL+L+ D +W+ + + G+Y A A L+++YP+ DIRVV+ TRGA ETLFI LQHMS AE+ RK++ LDCD +YFSDVLG FR PR + FYF D G I+SY+ E G+ ++ + EK AIS HAN GAY F G L R+VLD+P A +Y S++I M+ G+ FVG+ GTP +L AF+ V G K R F LD
Sbjct: 27 FREAGYVFPKPLIKIAGRPMLFHMLDNLQLRLGDVIWLVVPHSMHGQYEAEFALLQRQYPAADIRVVTFKMVTRGAVETLFIGLQHMSPAELSRKTLCLDCDNLYFSDVLGAFRTLPRDTSACFYFTDRGTAAIYSYLRLEEGSGAVLEVAEKVAISDHANVGAYGFASGSLLHRFARDVLDDPRREAMHYYVSNLISRMLDQGRPFVGLPAEQTSQCGTPTRLEAFIDTVAAGRALGSIKRRFCFALD 275 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16630.4753.1 >prot_Ecto-sp13_S_contig16630.4753.1 ID=prot_Ecto-sp13_S_contig16630.4753.1|Name=mRNA_Ecto-sp13_S_contig16630.4753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=255bp MLPSCCRFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQEback to top mRNA from alignment at Ecto-sp13_S_contig16630:1365..2965+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16630.4753.1 ID=mRNA_Ecto-sp13_S_contig16630.4753.1|Name=mRNA_Ecto-sp13_S_contig16630.4753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1601bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16630:1365..2965+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16630:1365..2965+ >mRNA_Ecto-sp13_S_contig16630.4753.1 ID=mRNA_Ecto-sp13_S_contig16630.4753.1|Name=mRNA_Ecto-sp13_S_contig16630.4753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=765bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16630:1365..2965+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |