mRNA_Ecto-sp13_S_contig16630.4753.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16630.4753.1
Unique NamemRNA_Ecto-sp13_S_contig16630.4753.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: D7FRN4_ECTSI (Putative hydrolase (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN4_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 4.910e-149
Identity = 214/229 (93.45%), Postives = 219/229 (95.63%), Query Frame = 1
Query:   79 MLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVPNFFCVGTPAQLRAFLGLVQKGVVAPQRKTRVFFDLD 765
            MLFWLLDNLKLKPEDTLWVG+QQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMS AEIRRKSISLDCDTIYFSDVLG FRAC  GCGSSFYFEDEGDKPIFSYI FEP TDKIV+IREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVG AGEFYTSSIIE MIQAGQKFVGIHVP+FFCVGTPAQLR+FLGLVQKG V P+RKTRVFFDLD
Sbjct:    1 MLFWLLDNLKLKPEDTLWVGVQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSSAEIRRKSISLDCDTIYFSDVLGSFRACASGCGSSFYFEDEGDKPIFSYIEFEPSTDKIVYIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGKAGEFYTSSIIERMIQAGQKFVGIHVPDFFCVGTPAQLRSFLGLVQKGGVVPRRKTRVFFDLD 229          
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A818V4J0_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A818V4J0_9BILA)

HSP 1 Score: 243 bits (621), Expect = 8.060e-77
Identity = 126/257 (49.03%), Postives = 168/257 (65.37%), Query Frame = 1
Query:   19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEP-----GTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVP--NFFCVGTPAQLRAFLGLVQKGVVA-PQRKTRVFFDLD 765
            RFS E YR PKPLINIVGRPMLFWLLDNL  K +D +++G+ + LE ++ +   ++ EYP+     V IDF+TRGA ETLFIMLQ ++   +  K+ISLDCDTIYF  +L  FR  P    +SF+FED G KP+FSY+  +      G   +  +REK  IS HANTGAYAF     L+  C ++LD  VG++GE+YT++II+ M++  ++FVGI V   +F CVG P QL  FL  ++    + P RK R  FDLD
Sbjct:   13 RFSKENYRFPKPLINIVGRPMLFWLLDNLDTKEDDIIYLGLLESLEKQFNLVQTIKMEYPNRKFESVVIDFETRGAVETLFIMLQFLNPDRLDCKTISLDCDTIYFQPILEKFRRLPSEINASFFFEDNGGKPVFSYLKLDENLTDEGYHSVTDVREKIMISTHANTGAYAFRSARILKQYCIQLLDEAVGSSGEYYTTNIIKLMLEDQERFVGIEVNINDFVCVGIPVQLIDFLKKLKTDQHSYPVRKMRFCFDLD 269          
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: H1VD75_COLHI (Nucleotidyl transferase n=1 Tax=Colletotrichum higginsianum (strain IMI 349063) TaxID=759273 RepID=H1VD75_COLHI)

HSP 1 Score: 243 bits (621), Expect = 4.430e-76
Identity = 130/260 (50.00%), Postives = 172/260 (66.15%), Query Frame = 1
Query:   19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEP---GTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLD--NPVGN-AGEFYTSSIIEGMIQAGQKFVGIHVP--NFFCVGTPAQLRAFLGLVQ---KGVVAPQRKTRVFFDLD 765
            RF+ EGYR PKPLINIVGRPML WL+DNL LKP DTLW+ I +E++ E+ I   + K +  +D R++ +  QT+GA+ETL+I+ Q M+   + RK++SLDCDTIY++DVL   R  P+G G  FYF D GDKPIFSYI  EP   G ++IV I+EK+AIS  ANTGAY FP   +L+    E LD   P G+  GE+YTS +I  MIQ G  ++G+ V   +F  VGTP QL+  L L++     +    +K R  FDLD
Sbjct:   39 RFAKEGYRYPKPLINIVGRPMLLWLIDNLSLKPGDTLWMAINEEVDDEFRIGQLVSKTFSKIDFRLLRLRHQTKGASETLYIVTQSMTKKHLERKTVSLDCDTIYWADVLQDIRNMPKGHGGCFYFPDVGDKPIFSYIKTEPTKDGLERIVDIQEKKAISNKANTGAYVFPSAGQLKSWAAENLDMKRPDGSEVGEYYTSQMIALMIQNGVPYLGMPVSTKDFSVVGTPEQLKDLLKLLKTDTSNLPIKLKKRRFCFDLD 298          
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A814WXJ1_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814WXJ1_9BILA)

HSP 1 Score: 248 bits (632), Expect = 6.610e-75
Identity = 129/250 (51.60%), Postives = 164/250 (65.60%), Query Frame = 1
Query:   19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDKIVH-IREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVPNFFCVGTPAQLRAFLGLVQKGVVAPQRKTRVFFDLD 765
            RF  EGYR PKPLINIVGRPMLF+LLD LKL+PED L+V + Q +E E+ + A+++KEYP LD+ VV + FQTRGAAETLF++LQ +SF  IR   +S      ++ D    FRA    C   FYFED G+KP+FSY+  E   D +VH ++EK  IS HANTGAY F  G+ L  +C  VLD  V  +GE+Y SS+I  M+  G KF+GI V +F C+GTP QL+ FL  V        +K R  FDLD
Sbjct:    7 RFQTEGYRFPKPLINIVGRPMLFFLLDRLKLEPEDKLFVALSQGIEDEFHVGAQIKKEYPQLDLHVVILKFQTRGAAETLFVILQSVSFNHIRTLGVSN-----FYLDGFCTFRASESSC--CFYFEDRGNKPVFSYL--EMDEDNVVHAVKEKVPISTHANTGAYGFSSGNALLSSCVRVLDVGVDTSGEYYISSVITQMLSEGLKFIGIFVEDFSCIGTPWQLKEFLSKVTHNPSLITKKRRFCFDLD 247          
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A816EGU7_9BILA (Hypothetical protein n=4 Tax=Rotaria TaxID=231623 RepID=A0A816EGU7_9BILA)

HSP 1 Score: 247 bits (630), Expect = 9.150e-74
Identity = 130/257 (50.58%), Postives = 165/257 (64.20%), Query Frame = 1
Query:   19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDK-----IVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVP--NFFCVGTPAQLRAFLG-LVQKGVVAPQRKTRVFFDLD 765
            RFS E YR PKPLI IVGRPMLFWLLD+L  K +D +++GI   LE ++ I   L+ EYP      + IDF+TRGAAETLFI+LQ M    +RRK+ISLDCDTIYF  ++  FR  P    +SF+FED G KPI+SY+  +   ++     +  + EK  IS HANTGAYAF     L+  C  +LD  VG++GE+YT+SII+ M+  G++FVGIHV    F CVGTP QL  FL  L  K    P  + R  FDLD
Sbjct:   13 RFSKENYRFPKPLIKIVGRPMLFWLLDHLDTKEDDVIYIGILVNLEKQFDIIQTLKMEYPKKTFEGIIIDFETRGAAETLFIILQSMEPDRLRRKTISLDCDTIYFKPIIEDFRRLPGNLNASFFFEDNGGKPIYSYLKLDENINEQACFTVRDVCEKIMISNHANTGAYAFHSASILKQFCIRLLDEAVGHSGEYYTTSIIKLMMDHGERFVGIHVSLDEFTCVGTPDQLNHFLKRLKTKESSIPVPRIRFCFDLD 269          
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A815X3D1_ADIRI (Hypothetical protein n=4 Tax=Adineta ricciae TaxID=249248 RepID=A0A815X3D1_ADIRI)

HSP 1 Score: 246 bits (628), Expect = 1.610e-73
Identity = 131/258 (50.78%), Postives = 163/258 (63.18%), Query Frame = 1
Query:   19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDKIVH------IREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVP--NFFCVGTPAQLRAFLG-LVQKGVVAPQRKTRVFFDLD 765
            RF+ E YR PKPLI IVGRPMLFWL+D L LK +D +++GI + LE ++A+   LR EYP    + V +DF TRGAAETLFIMLQ +    + RK+ISLDCDTIYF  +L  FR  P    +SFYFED G KPIFSY+ FE       H      + EK  IS HANTGAYAF     ++  C ++LD  VG +GE+YT+ II+ M+   + FVG+ V   +F CVGTP QL+ FL  L  K      RK R  FDLD
Sbjct:   13 RFTRENYRFPKPLIKIVGRPMLFWLIDYLDLKEDDIIYLGITEALEKQFALTQTLRVEYPKQTFKSVVLDFDTRGAAETLFIMLQSIDDDRVERKTISLDCDTIYFKPILERFRQLPAHLNASFYFEDHGGKPIFSYLKFEHEPSDPEHPPVVTDVAEKIMISTHANTGAYAFSSTSIMKEYCIQLLDEAVGESGEYYTTHIIKLMLTDKEPFVGLPVQTDDFVCVGTPDQLKTFLKRLKSKDTPVQVRKMRFCFDLD 270          
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A7S3G4H6_9EUKA (Hypothetical protein n=4 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4H6_9EUKA)

HSP 1 Score: 244 bits (624), Expect = 4.510e-73
Identity = 121/251 (48.21%), Postives = 166/251 (66.14%), Query Frame = 1
Query:   19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPS-LDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVPNFFCVGTPAQLRAFLGLVQKG-VVAPQRKTRVFFDLD 765
            RF  +GY +PKP++ +VGRPM+FWLLDNL L+ +DT+W G+ +EL  E+    ++       + ++ + ++F TRGAAETLF +L  M   E+ RK+ISLDCDT Y +DVLG FR    G G+ F FED G  PI+SY   +  +   V I EK  IS HANTGAYAFP    L+ +C +V+D+ VGN GE+YTSS+++ +++ G    G+HV +F C+GTP QL AFL LV  G  +AP+R  R  FDLD
Sbjct:   26 RFRKKGYNVPKPMVRVVGRPMIFWLLDNLSLEGQDTVWFGLSKELRDEHVFKQQVSNLLKGKVGVKFIDLEFDTRGAAETLFAILSQMDERELSRKTISLDCDTFYVTDVLGKFRQVAPGEGAIFVFEDAGSAPIYSYTVLDE-SGSAVRIAEKLKISNHANTGAYAFPSAKSLKDSCEKVIDSSVGNVGEYYTSSVVQQLLKDGIIVRGVHVDDFHCLGTPEQLDAFLALVADGSFIAPRR--RFCFDLD 273          
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A0D2WPY4_CAPO3 (NTP_transferase domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WPY4_CAPO3)

HSP 1 Score: 243 bits (621), Expect = 1.310e-72
Identity = 120/250 (48.00%), Postives = 163/250 (65.20%), Query Frame = 1
Query:   19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKL-KPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVPNFFCVGTPAQLRAFLGLVQKGVVAPQRKTRVFFDLD 765
            RF  + YR PKPLINIVG PML+WLLDNL + +  D +W+ +   +E  +    R+ K+YP   I VV++DF+TRG AET+F++LQHM   +++R++I LDCDTIYFSDVL  FR    G  +SF FED+  +P+FSYI  +     I+ I+EK  IS  ANTGAY F  G+ L+  C E LD  V + GE+YTS+II  M+   Q F G++V +F+CVG+P QL  FL  ++ G +   R  R  FDLD
Sbjct:   13 RFERDNYRFPKPLINIVGHPMLYWLLDNLSIDRSNDVIWMAVMTSVENIFHFKKRVCKQYPKHRINVVTLDFETRGPAETVFVVLQHMKPDDLKRRTICLDCDTIYFSDVLADFRRLDPGVNASFCFEDKIGQPVFSYIAMDD-QQNILDIKEKMPISTWANTGAYGFASGELLKQFCVEQLDTSVDSTGEYYTSAIIRLMLSQKQPFKGVNVSDFYCVGSPDQLTDFLHNIRIGKIKSPRTMRFCFDLD 261          
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: A0A819T6J3_9BILA (Hypothetical protein n=6 Tax=Adineta steineri TaxID=433720 RepID=A0A819T6J3_9BILA)

HSP 1 Score: 243 bits (621), Expect = 1.870e-72
Identity = 126/257 (49.03%), Postives = 168/257 (65.37%), Query Frame = 1
Query:   19 RFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEP-----GTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVP--NFFCVGTPAQLRAFLGLVQKGVVA-PQRKTRVFFDLD 765
            RFS E YR PKPLINIVGRPMLFWLLDNL  K +D +++G+ + LE ++ +   ++ EYP+     V IDF+TRGA ETLFIMLQ ++   +  K+ISLDCDTIYF  +L  FR  P    +SF+FED G KP+FSY+  +      G   +  +REK  IS HANTGAYAF     L+  C ++LD  VG++GE+YT++II+ M++  ++FVGI V   +F CVG P QL  FL  ++    + P RK R  FDLD
Sbjct:   13 RFSKENYRFPKPLINIVGRPMLFWLLDNLDTKEDDIIYLGLLESLEKQFNLVQTIKMEYPNRKFESVVIDFETRGAVETLFIMLQFLNPDRLDCKTISLDCDTIYFQPILEKFRRLPSEINASFFFEDNGGKPVFSYLKLDENLTDEGYHSVTDVREKIMISTHANTGAYAFRSARILKQYCIQLLDEAVGSSGEYYTTNIIKLMLEDQERFVGIEVNINDFVCVGIPVQLIDFLKKLKTDQHSYPVRKMRFCFDLD 269          
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Match: R1EYU7_EMIHU (NTP_transf_3 domain-containing protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EYU7_EMIHU)

HSP 1 Score: 232 bits (591), Expect = 3.970e-72
Identity = 118/249 (47.39%), Postives = 152/249 (61.04%), Query Frame = 1
Query:   22 FSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQELEGEY-AIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRRKSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGTDKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTSSIIEGMIQAGQKFVGIHVPNFFCVGTPAQLRAFLGLVQKGVVAPQRKTRVFFDLD 765
            F   GY  PKPLI I GRPMLF +LDNL+L+  D +W+ +   + G+Y A  A L+++YP+ DIRVV+    TRGA ETLFI LQHMS AE+ RK++ LDCD +YFSDVLG FR  PR   + FYF D G   I+SY+  E G+  ++ + EK AIS HAN GAY F  G  L    R+VLD+P   A  +Y S++I  M+  G+ FVG+        GTP +L AF+  V  G      K R  F LD
Sbjct:   27 FREAGYVFPKPLIKIAGRPMLFHMLDNLQLRLGDVIWLVVPHSMHGQYEAEFALLQRQYPAADIRVVTFKMVTRGAVETLFIGLQHMSPAELSRKTLCLDCDNLYFSDVLGAFRTLPRDTSACFYFTDRGTAAIYSYLRLEEGSGAVLEVAEKVAISDHANVGAYGFASGSLLHRFARDVLDDPRREAMHYYVSNLISRMLDQGRPFVGLPAEQTSQCGTPTRLEAFIDTVAAGRALGSIKRRFCFALD 275          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16630.4753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRN4_ECTSI4.910e-14993.45Putative hydrolase (ISS) n=1 Tax=Ectocarpus silicu... [more]
A0A818V4J0_9BILA8.060e-7749.03Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]
H1VD75_COLHI4.430e-7650.00Nucleotidyl transferase n=1 Tax=Colletotrichum hig... [more]
A0A814WXJ1_9BILA6.610e-7551.60Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A816EGU7_9BILA9.150e-7450.58Hypothetical protein n=4 Tax=Rotaria TaxID=231623 ... [more]
A0A815X3D1_ADIRI1.610e-7350.78Hypothetical protein n=4 Tax=Adineta ricciae TaxID... [more]
A0A7S3G4H6_9EUKA4.510e-7348.21Hypothetical protein n=4 Tax=Palpitomonas bilix Ta... [more]
A0A0D2WPY4_CAPO31.310e-7248.00NTP_transferase domain-containing protein n=1 Tax=... [more]
A0A819T6J3_9BILA1.870e-7249.03Hypothetical protein n=6 Tax=Adineta steineri TaxI... [more]
R1EYU7_EMIHU3.970e-7247.39NTP_transf_3 domain-containing protein (Fragment) ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16630contigEcto-sp13_S_contig16630:1365..2965 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score441.0
Seed ortholog evalue3.7e-121
Seed eggNOG ortholog2880.D7FRN4
Model size765
Hectar predicted targeting categoryother localisation
Exons4
EggNOG OGs28NC4@1,2QUXI@2759
Cds size765
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462872.7003448-CDS-Ecto-sp13_S_contig16630:1364..16371681462872.7003448-CDS-Ecto-sp13_S_contig16630:1364..1637Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16630 1365..1637 +
1681462872.715136-CDS-Ecto-sp13_S_contig16630:1938..20791681462872.715136-CDS-Ecto-sp13_S_contig16630:1938..2079Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16630 1939..2079 +
1681462872.7230062-CDS-Ecto-sp13_S_contig16630:2283..25051681462872.7230062-CDS-Ecto-sp13_S_contig16630:2283..2505Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16630 2284..2505 +
1681462872.7309258-CDS-Ecto-sp13_S_contig16630:2836..29651681462872.7309258-CDS-Ecto-sp13_S_contig16630:2836..2965Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16630 2837..2965 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16630.4753.1prot_Ecto-sp13_S_contig16630.4753.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16630 1365..2965 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16630.4753.1

>prot_Ecto-sp13_S_contig16630.4753.1 ID=prot_Ecto-sp13_S_contig16630.4753.1|Name=mRNA_Ecto-sp13_S_contig16630.4753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=255bp
MLPSCCRFSAEGYRLPKPLINIVGRPMLFWLLDNLKLKPEDTLWVGIQQE
LEGEYAIAARLRKEYPSLDIRVVSIDFQTRGAAETLFIMLQHMSFAEIRR
KSISLDCDTIYFSDVLGCFRACPRGCGSSFYFEDEGDKPIFSYIGFEPGT
DKIVHIREKEAISRHANTGAYAFPCGDRLRMACREVLDNPVGNAGEFYTS
SIIEGMIQAGQKFVGIHVPNFFCVGTPAQLRAFLGLVQKGVVAPQRKTRV
FFDLD
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mRNA from alignment at Ecto-sp13_S_contig16630:1365..2965+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16630.4753.1 ID=mRNA_Ecto-sp13_S_contig16630.4753.1|Name=mRNA_Ecto-sp13_S_contig16630.4753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1601bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16630:1365..2965+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTACCGTCATGTTGCAGATTTTCAGCCGAAGGATATCGGCTGCCCAA ACCGTTAATAAACATTGTCGGACGCCCAATGCTCTTTTGGCTTTTAGACA ACCTCAAGCTCAAGCCAGAAGACACTCTCTGGGTTGGGATCCAACAAGAG CTGGAGGGCGAATACGCGATAGCCGCCCGGTTGAGAAAGGAATATCCGTC GCTTGACATAAGGGTTGTCTCCATTGACTTCCAGACGCGAGGGGCGGCAG AAACTCTTTTCATAATGCTGCAGGTAAGATTCGCCCAAGGAGAAGCGTAC TCTGCGAGAAGCGAAAAGCAGAAAAAATCTCTCGAACTACAAGCGAGGGG GCCTAGTACAACTTGGCGCGCCCTGTTGTTGCACAGCAGAAGAACTCGCA TCCTACGTGATGCTACCGTTGGTTGTGGCTTGAGACAGGAAGAAAGGCGT CCCATTGATCGTCATGTTTGTGGCTCTCTGAGGCTTTTTGTATTTGTGCC AGAGTTCTCAGACCGCCAACGAACACGATGTCTTCGGATTCTCTGTACCG CTTGCCACCTTCCCCATGGACAAGCACATGTCATTCGCAGAGATTCGGCG AAAAAGCATCTCCCTGGATTGCGATACCATTTACTTCTCCGATGTGCTCG GATGCTTCCGAGCATGCCCGAGAGGTTGTGGATCTAGCTTCTACTTTGAA GACGAAGGAGACAAGGTGAAAATCGCAAACGTCCATAAAGCTACAGGTAT AGTGGCCGTGACGTCATATCGCATTCTAGCAGCGCGATTGGAATGAGCTG GAAACAATCCTTCGTGGTGGACTTCCCGGTGCAACAGCAAGGTGGCGTGT ATTTGAAATTCGTGCCCTTCTCCTAATTTCCACATTACTTTCTTCCGAAC ACCGCTCTCGCCGTCTCAGCCAATCTTCTCCTATATCGGATTCGAACCGG GCACGGACAAGATTGTTCATATCCGAGAGAAGGAGGCGATTTCTCGACAT GCGAACACCGGTGCTTACGCCTTCCCGTGTGGGGACCGCCTGAGAATGGC GTGCCGTGAAGTCCTCGACAACCCGGTCGGGAACGCCGGGGAGTTCTACA CGTCGAGCATTATTGAAGGGATGATCCAAGCGGGCCAGAAGGTTGCCTTT ATTCTGCTTTTGCTTGGTGTTCGGAGAAAGCAATCGACCGGAGATTTCGG TCAAAAGCGTTGCTTGTGAGGAAGAAAACATTCTTTTTTTAAGTATGCAG CAAGAGCAATGGTCGTTGTGACGAATCTACCTGAGAATTGTACTAGTACG ACCCTGCAGCGTTGCAAATACCAGAAGTGATACCCTGTAAGCACTGCGCA TTCGGTCACTAACAAGTTCCGACAGGTACTCTAAAGAAACCACATCGTGC TGATAGACCTCTGCCATGCCCTGCCACTACTGCGCACTCTTTGCTCCCCC GCTTTCGTACAATATCCTCTAGTTCGTGGGGATTCACGTGCCAAACTTCT TTTGCGTAGGCACGCCGGCGCAACTGCGCGCGTTCCTTGGCTTGGTCCAA AAAGGGGTAGTGGCACCGCAGCGCAAAACTCGTGTCTTCTTCGACCTCGA T
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16630:1365..2965+

>mRNA_Ecto-sp13_S_contig16630.4753.1 ID=mRNA_Ecto-sp13_S_contig16630.4753.1|Name=mRNA_Ecto-sp13_S_contig16630.4753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=765bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16630:1365..2965+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTACCGTCATGTTGCAGATTTTCAGCCGAAGGATATCGGCTGCCCAA
ACCGTTAATAAACATTGTCGGACGCCCAATGCTCTTTTGGCTTTTAGACA
ACCTCAAGCTCAAGCCAGAAGACACTCTCTGGGTTGGGATCCAACAAGAG
CTGGAGGGCGAATACGCGATAGCCGCCCGGTTGAGAAAGGAATATCCGTC
GCTTGACATAAGGGTTGTCTCCATTGACTTCCAGACGCGAGGGGCGGCAG
AAACTCTTTTCATAATGCTGCAGCACATGTCATTCGCAGAGATTCGGCGA
AAAAGCATCTCCCTGGATTGCGATACCATTTACTTCTCCGATGTGCTCGG
ATGCTTCCGAGCATGCCCGAGAGGTTGTGGATCTAGCTTCTACTTTGAAG
ACGAAGGAGACAAGCCAATCTTCTCCTATATCGGATTCGAACCGGGCACG
GACAAGATTGTTCATATCCGAGAGAAGGAGGCGATTTCTCGACATGCGAA
CACCGGTGCTTACGCCTTCCCGTGTGGGGACCGCCTGAGAATGGCGTGCC
GTGAAGTCCTCGACAACCCGGTCGGGAACGCCGGGGAGTTCTACACGTCG
AGCATTATTGAAGGGATGATCCAAGCGGGCCAGAAGTTCGTGGGGATTCA
CGTGCCAAACTTCTTTTGCGTAGGCACGCCGGCGCAACTGCGCGCGTTCC
TTGGCTTGGTCCAAAAAGGGGTAGTGGCACCGCAGCGCAAAACTCGTGTC
TTCTTCGACCTCGAT
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