prot_Ecto-sp13_S_contig1656.4712.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1656.4712.1
Unique Nameprot_Ecto-sp13_S_contig1656.4712.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length294
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1656.4712.1 vs. uniprot
Match: A0A6H5L4U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U3_9PHAE)

HSP 1 Score: 383 bits (983), Expect = 2.420e-128
Identity = 255/289 (88.24%), Postives = 258/289 (89.27%), Query Frame = 0 
Query:    8 MRVAMSSSDSHGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGQGYGRASDLLRAGHRSDGVAXXXXXXXXXXXXXXXXSGKSKDARPGGISTAGPVVVEPSPTASPSPNQ--SSPSPRGEKGKYMVMGVLSSALDLAKAAVAHDEQGALPEKVLPYYKKAIRAIDTALKLLPEHVAESTGIKRHRDNYQARVDKLTQGLTRDNQHKDRRVRQQSRVRFSQMDLDANQSTLEAEPTHPARRSYWVLRLVRTTILYGGHLTPKLYAPKEVWAQVG 294
            MRVAMSSSDSHGE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    AGQGYGRASDLL AGHR+                      KSKDARPGGISTAGPVVVEPSPTASPSPNQ  SSPSPRGEKGKYMVMGVLSSALDLAKAAVAHDEQGALPEKVLPYYKKAIRAIDTALKLLPEHVAESTGIKRHRDNYQARVDKLTQGLTRDNQHKDRRVRQQSRVRFSQMDLDA+QSTLEAEPTHPARRSYWVLRLVRTTILYGG+LTPKLYAPKEVW QVG
Sbjct:    1 MRVAMSSSDSHGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSS--AGQGYGRASDLLEAGHRT---------------APPPSCEKSKDARPGGISTAGPVVVEPSPTASPSPNQRCSSPSPRGEKGKYMVMGVLSSALDLAKAAVAHDEQGALPEKVLPYYKKAIRAIDTALKLLPEHVAESTGIKRHRDNYQARVDKLTQGLTRDNQHKDRRVRQQSRVRFSQMDLDAHQSTLEAEPTHPARRSYWVLRLVRTTILYGGYLTPKLYAPKEVWTQVG 272
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BLAST of mRNA_Ecto-sp13_S_contig1656.4712.1 vs. uniprot
Match: D7G2C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C1_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 1.660e-94
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0 
Query:  146 MVMGVLSSALDLAKAAVAHDEQGALPEKVLPYYKKAIRAIDTALKLLPEHVAESTGIKRHRDNYQARVDKLTQGLTRDNQHKDRRVRQQSRVRFSQMDLDANQSTLEAEPTHPARRSYWVLRLVRTTILYGGHLTPKLYAPKEVWAQVG 294
            MVMGVLSSALDLAKAAVAHDEQGALPEKVLPYYKKAIRAIDTALKLLPEHVAESTGIKRHRDNYQARVDKLTQGLTRDNQHKDRRVRQQSRVRFSQMDLDANQSTLEAEPTHPARRSYWVLRLVRTTILYGGHLTPKLYAPKEVW QVG
Sbjct:    1 MVMGVLSSALDLAKAAVAHDEQGALPEKVLPYYKKAIRAIDTALKLLPEHVAESTGIKRHRDNYQARVDKLTQGLTRDNQHKDRRVRQQSRVRFSQMDLDANQSTLEAEPTHPARRSYWVLRLVRTTILYGGHLTPKLYAPKEVWTQVG 149
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1656.4712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4U3_9PHAE2.420e-12888.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2C1_ECTSI1.660e-9499.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.280coord: 148..226
e-value: 2.2E-5
score: 26.5
IPR036181MIT domain superfamilySUPERFAMILY116846MIT domaincoord: 150..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1656contigEcto-sp13_S_contig1656:333..6811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1656.4712.1mRNA_Ecto-sp13_S_contig1656.4712.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1656 333..6811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1656.4712.1 ID=prot_Ecto-sp13_S_contig1656.4712.1|Name=mRNA_Ecto-sp13_S_contig1656.4712.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=294bp
MTTNSRRMRVAMSSSDSHGEPPPSPPPLLQYGGSVGGGGGGGGGAVAAPA
ASATAAGGRRRSSAGQGYGRASDLLRAGHRSDGVAAAPPPPAAVAAPPPP
SSGKSKDARPGGISTAGPVVVEPSPTASPSPNQSSPSPRGEKGKYMVMGV
LSSALDLAKAAVAHDEQGALPEKVLPYYKKAIRAIDTALKLLPEHVAEST
GIKRHRDNYQARVDKLTQGLTRDNQHKDRRVRQQSRVRFSQMDLDANQST
LEAEPTHPARRSYWVLRLVRTTILYGGHLTPKLYAPKEVWAQVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036181MIT_dom_sf