mRNA_Ecto-sp13_S_contig10498.471.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10498.471.1 vs. uniprot
Match: D7FU47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU47_ECTSI) HSP 1 Score: 170 bits (431), Expect = 3.660e-52 Identity = 95/112 (84.82%), Postives = 96/112 (85.71%), Query Frame = 1
Query: 163 MSITLEEALLLAETTSQQSPPRDSEFGVEGPAGAVAAAVAV----------GALADANVLRAYGARLLVAEKNIGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 468
MSITLEEALLLAET SQQSPPRD EFGVEGPA VAAA A GALADANVLRA+GARLLVAEKNIGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS
Sbjct: 1 MSITLEEALLLAETASQQSPPRDGEFGVEGPAVTVAAAAAASGGWRAAERSGALADANVLRAHGARLLVAEKNIGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 112
BLAST of mRNA_Ecto-sp13_S_contig10498.471.1 vs. uniprot
Match: A0A1V9ZK10_9STRA (Inositol-3,4-bisphosphate 4-phosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZK10_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.190e-37 Identity = 80/149 (53.69%), Postives = 104/149 (69.80%), Query Frame = 1
Query: 22 LSELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSITLEEALLLAETTSQQSPPRDSEFGVEGPAGAVAAAVAVGALADANVLRAYGARLLVAEKNIGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 468
L L AV+ + A KNT ILLEA AVRR+ GGRVT+CKSGKDRTAMS+TL++A LL + + +P F V P A V+ LA AN++R +G R++VA+KN+GRP YSFNALQR+ +PE+Y+PP TIQD++TS RDS
Sbjct: 983 LDPLMAAVQAENAAAKNTRILLEASDAVRRMNGGRVTYCKSGKDRTAMSVTLDQARLLFKRQASANP-----FLVTSPTHAPTDMVSADELAAANIMREHGVRIVVAKKNVGRPKYSFNALQRKLLPEIYRPPTSTIQDMVTSVTARDS 1126
BLAST of mRNA_Ecto-sp13_S_contig10498.471.1 vs. uniprot
Match: T0QHN7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QHN7_SAPDV) HSP 1 Score: 144 bits (362), Expect = 7.630e-37 Identity = 79/149 (53.02%), Postives = 103/149 (69.13%), Query Frame = 1
Query: 22 LSELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSITLEEALLLAETTSQQSPPRDSEFGVEGPAGAVAAAVAVGALADANVLRAYGARLLVAEKNIGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 468
L L V+ + A KNT ILLEA AVRR+ GGRVT+CKSGKDRTAMS+TL++A +L + + Q+P F V P A V+ LA AN++R YG R+ VA+KN+GRP YSFN++QR+ +PELY+PP TIQD++TS RDS
Sbjct: 994 LDPLMAVVQAENAAAKNTRILLEASDAVRRMNGGRVTYCKSGKDRTAMSVTLDQARVLFKRANVQNP-----FLVTSPTHASQEMVSSDELAAANLMREYGVRIAVAKKNVGRPKYSFNSIQRKLLPELYRPPTSTIQDMVTSVTARDS 1137
BLAST of mRNA_Ecto-sp13_S_contig10498.471.1 vs. uniprot
Match: A0A835ZA41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA41_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.070e-36 Identity = 87/152 (57.24%), Postives = 101/152 (66.45%), Query Frame = 1
Query: 13 HPALSELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSITLEEALLLAETTSQQSPPRDSEFGVEGPAGAVAAAVAVGALADANVLRAYGARLLVAEKNIGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 468
H L LE AV + KNTA+LLE++ AV+ L GGRVTFCKSGKDRTAMS+TLEE+ +L + GV G A A L ANVLRA+G R+ VAEKNIG PLYSFNA+QRQFIPELY+ P QTIQDV+TS RDS
Sbjct: 1423 HMHLLRLEAAVMAQQHNQKNTAVLLESERAVQLLGGGRVTFCKSGKDRTAMSVTLEESFMLLDKHLD---------GVGGEARA---------LRVANVLRAHGTRIAVAEKNIGSPLYSFNAIQRQFIPELYRAPVQTIQDVLTSFQKRDS 1556
BLAST of mRNA_Ecto-sp13_S_contig10498.471.1 vs. uniprot
Match: A0A397A4G3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A4G3_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.570e-32 Identity = 74/158 (46.84%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 13 HPALSELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSITLEEALLLAETTSQQSP------PRDSEFGVEGPAGAVAAAVAVGALADANVLRAYGARLLVAEKNIGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 468
H L L V+ + A KNT ILLEA VRRL GGRVT+CKSGKDRTAMS+TLE+A LL + S +P G E L AN++R +G R+ +A KN+GR YSFNA+QR+ +P++Y+PP TIQD++TS RDS
Sbjct: 339 HLLLDPLMAVVQSENAAAKNTRILLEASDVVRRLRGGRVTYCKSGKDRTAMSVTLEQARLLFKRVSGVNPLHLLGATEQLNIGAE-------------ELHAANIMREFGIRIEIANKNVGRYKYSFNAIQRKMLPDIYRPPMSTIQDIVTSVTARDS 483
BLAST of mRNA_Ecto-sp13_S_contig10498.471.1 vs. uniprot
Match: A0A7S3Y7E2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7E2_HETAK) HSP 1 Score: 121 bits (304), Expect = 2.140e-32 Identity = 72/152 (47.37%), Postives = 90/152 (59.21%), Query Frame = 1
Query: 13 HPALSELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSITLEEALLLAETTSQQSPPRDSEFGVEGPAGAVAAAVAVGALADANVLRAYGARLLVAEKNIGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 468
H L L AV + KN ILLEA+ A RL GGR TFCKSGKDRTAM+ TLE+A+LL + P +F L AN++RA G RL A KN+GRP YSFN+ QRQF+P +Y+PP + I D+ITS L+RD+
Sbjct: 14 HFLLEGLARAVEAQSTSEKNVDILLEAERAAYRLGGGRCTFCKSGKDRTAMAATLEQAVLLEQ---HLGPGAGRDFDA--------------ILQRANLMRARGVRLANAHKNVGRPKYSFNSFQRQFMPAIYKPPIEVIDDMITSTLHRDT 148
BLAST of mRNA_Ecto-sp13_S_contig10498.471.1 vs. uniprot
Match: A0A397AYA6_9STRA (Uncharacterized protein n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AYA6_9STRA) HSP 1 Score: 129 bits (325), Expect = 7.270e-32 Identity = 74/158 (46.84%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 13 HPALSELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSITLEEALLLAETTSQQSP------PRDSEFGVEGPAGAVAAAVAVGALADANVLRAYGARLLVAEKNIGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 468
H L L V+ + A KNT ILLEA VRRL GGRVT+CKSGKDRTAMS+TLE+A LL + S +P G E L AN++R +G R+ +A KN+GR YSFNA+QR+ +P++Y+PP TIQD++TS RDS
Sbjct: 1010 HLLLDPLMAVVQSENAAAKNTRILLEASDVVRRLRGGRVTYCKSGKDRTAMSVTLEQARLLFKRVSGVNPLHLLGATEQLNIGAE-------------ELHAANIMREFGIRIEIANKNVGRYKYSFNAIQRKMLPDIYRPPMSTIQDIVTSVTARDS 1154
BLAST of mRNA_Ecto-sp13_S_contig10498.471.1 vs. uniprot
Match: A0A024U4Q3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4Q3_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.350e-31 Identity = 74/158 (46.84%), Postives = 96/158 (60.76%), Query Frame = 1
Query: 13 HPALSELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSITLEEALLLAETTSQQSP------PRDSEFGVEGPAGAVAAAVAVGALADANVLRAYGARLLVAEKNIGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 468
H L L V+ + A KNT ILLEA VRRL GGRVT+CKSGKDRTAMS+TLE+A LL + S +P G E L AN++R +G R+ +A+KN+GR YSFNA+QR+ +P++Y+PP TIQD++TS RDS
Sbjct: 990 HLLLDPLMAVVQSENAAAKNTRILLEAADVVRRLRGGRVTYCKSGKDRTAMSVTLEQARLLFKRVSGVNPLHLMGATEQLSIGPE-------------ELQAANLMREFGIRIKIAKKNVGRYKYSFNAIQRKMLPDIYRPPVSTIQDIVTSVTARDS 1134
BLAST of mRNA_Ecto-sp13_S_contig10498.471.1 vs. uniprot
Match: A0A5D6YDX5_9STRA (Phosphatidylinositol-3,4-bisphosphate 4-phosphatase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDX5_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.370e-31 Identity = 81/154 (52.60%), Postives = 101/154 (65.58%), Query Frame = 1
Query: 19 ALSELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSITLEEALLLAETTSQQSPPRDSEFGVEGPAGAVAAAVAVGALAD----ANVLRAYGARLLVAEKNIGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 468
+L L +V + + KNT ILL A AVR L GGR+TFCKSGKDRTAMS+TLE+A L + Q+ E G G AGA A A G L + ANVLRA+G R+ +A KN+GR YSFNALQR+ +PE+Y+PP TIQD++TS RDS
Sbjct: 1233 SLRHLRVSVEGESSSAKNTCILLHASDAVRSLRGGRLTFCKSGKDRTAMSVTLEQARRLVQR--QRHVLEAIEAG--GGAGAPTTAAA-GPLDEVQSVANVLRAFGVRMAIAHKNVGRFQYSFNALQRKLLPEIYRPPVATIQDMVTSVTARDS 1381
BLAST of mRNA_Ecto-sp13_S_contig10498.471.1 vs. uniprot
Match: A0A6G0XWA4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA4_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.830e-31 Identity = 75/156 (48.08%), Postives = 98/156 (62.82%), Query Frame = 1
Query: 13 HPALSELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTAMSITLEEALLLAETTSQQSPPRDSEFGVEGPAGAVAAAVAVGALAD----ANVLRAYGARLLVAEKNIGRPLYSFNALQRQFIPELYQPPPQTIQDVITSALNRDS 468
H L L V+ + A KNT ILLEA VRRL GGRVT+CKSGKDRTAMS+TLE+A LL + S +P + A + AD AN++R +G R+ +A+KN+GR YSFNALQR+ +P++Y+PP TIQD++TS RDS
Sbjct: 948 HLLLDPLMAVVQSENAASKNTRILLEASDVVRRLNGGRVTYCKSGKDRTAMSVTLEQARLLFKRVSGVNPLH-----------LLGATEQLNISADELNAANLMREFGIRIKIAKKNVGRFKYSFNALQRKMLPDIYRPPVSTIQDMVTSVTARDS 1092 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10498.471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10498.471.1 >prot_Ecto-sp13_S_contig10498.471.1 ID=prot_Ecto-sp13_S_contig10498.471.1|Name=mRNA_Ecto-sp13_S_contig10498.471.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=154bp MHPALSELETAVRDDKVAHKNTAILLEAQVAVRRLCGGRVTFCKSGKDRTback to top mRNA from alignment at Ecto-sp13_S_contig10498:3939..5114+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10498.471.1 ID=mRNA_Ecto-sp13_S_contig10498.471.1|Name=mRNA_Ecto-sp13_S_contig10498.471.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1176bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10498:3939..5114+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10498:3939..5114+ >mRNA_Ecto-sp13_S_contig10498.471.1 ID=mRNA_Ecto-sp13_S_contig10498.471.1|Name=mRNA_Ecto-sp13_S_contig10498.471.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=462bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10498:3939..5114+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |