mRNA_Ecto-sp13_S_contig16549.4707.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: D7FL28_ECTSI (Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL28_ECTSI) HSP 1 Score: 389 bits (999), Expect = 3.340e-121 Identity = 210/234 (89.74%), Postives = 219/234 (93.59%), Query Frame = 1
Query: 1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSLAAPPSPSSASP--SDAALIAATDGNSPENEESST-PRDAQSSILSRIIAFN 693
QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQ+GQ EG G +ARFSWCDGVFLSALKAG+WVLLDELNLATQ VLEGLNACLDHRAEVYIPELGRSFKCP TFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPL+PDDLLYIAVNKFPSLAAPPSPSS SP SDAALIAATDGNS +NE+SS P DA +S+LSR+IAFN
Sbjct: 1275 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQTGQPTEGSAGNNARFSWCDGVFLSALKAGRWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFKCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLTPDDLLYIAVNKFPSLAAPPSPSS-SPVSSDAALIAATDGNSQDNEKSSCIPCDA-ASMLSRMIAFN 1506
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: A0A6H5JCJ9_9PHAE (Midasin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ9_9PHAE) HSP 1 Score: 297 bits (760), Expect = 4.400e-89 Identity = 150/162 (92.59%), Postives = 152/162 (93.83%), Query Frame = 1
Query: 1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKV 486
QIRKAVLLEGSPGVGKTSLISALAAA GHELVRINLSEQTDVSDLFGSDLPVP TDSGE SGQQ EG G SARF+WCDGVFLSALKAGKWVLLDELNLA Q VLEGLNACLDHRAEVYIPELGRSF+CP TFKVFAAQNPLGQGGGRKGLPRSFLSRFTKV
Sbjct: 93 QIRKAVLLEGSPGVGKTSLISALAAAAGHELVRINLSEQTDVSDLFGSDLPVPGTDSGELSGQQTEGSGATSARFTWCDGVFLSALKAGKWVLLDELNLAPQSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKV 254
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: A0A835Z947_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z947_9STRA) HSP 1 Score: 264 bits (674), Expect = 1.500e-77 Identity = 131/184 (71.20%), Postives = 152/184 (82.61%), Query Frame = 1
Query: 1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSLA 552
Q+RKAVLLEGSPGVGKT+L++ALAAA GH LVRINLSEQTD+SDL GSDLPV +D F+WCDGVFL AL+AG WVLLDELNLA+Q VLEGLNACLDHRAEV++PELGR+F+CP TF+VFAAQNPL QGGGRKGLP+SFL+RFTKV+VD L PDDL++IA +FP+LA
Sbjct: 1416 QLRKAVLLEGSPGVGKTALVTALAAAAGHPLVRINLSEQTDLSDLMGSDLPVAASDXXXXXXXXX------GPAFAWCDGVFLRALRAGHWVLLDELNLASQAVLEGLNACLDHRAEVFVPELGRAFRCPPTFRVFAAQNPLSQGGGRKGLPKSFLNRFTKVFVDALGPDDLMHIASGRFPALA 1593
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: A0A662XM65_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XM65_9STRA) HSP 1 Score: 261 bits (668), Expect = 1.010e-76 Identity = 128/186 (68.82%), Postives = 154/186 (82.80%), Query Frame = 1
Query: 1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSLAAP 558
Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP + + ++ +Q +GG +S F WCDGVFL ALKAG WVLLDELNLA+Q VLEGLN+CLDHR VYIPEL R F+CPSTF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L DL++IA + +PSL P
Sbjct: 882 QVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSSTNDEGKEQADGGN-SSGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPSTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPSLHRP 1066
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: G4ZMS6_PHYSP (VWFA domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=G4ZMS6_PHYSP) HSP 1 Score: 259 bits (662), Expect = 6.510e-76 Identity = 138/233 (59.23%), Postives = 168/233 (72.10%), Query Frame = 1
Query: 1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPD--TDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSLAAPPSPSSASPSDAALIAATDGNSPENEESSTPRDAQSSILSRIIAFN 693
Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP TD + + + GGG+S F WCDGVFL ALKAG WVLLDELNLA+Q VLEGLN+CLDHR VYIPEL R F+CP TF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L DL++IA + +P+L + + S SD+AL+ T +L R+I FN
Sbjct: 1914 QVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPTDETDDNSSKPSQGGGSSGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTLHC--AVTETSMSDSALVGQT-------------------LLERMIGFN 2125
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: D0NH58_PHYIT (Midasin n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NH58_PHYIT) HSP 1 Score: 258 bits (660), Expect = 1.210e-75 Identity = 126/183 (68.85%), Postives = 151/183 (82.51%), Query Frame = 1
Query: 1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSL 549
Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP + ++ G + GGG +S F WCDGVFL ALKAG WVLLDELNLA+Q VLEGLN+CLDHR VYIPEL R F+CP TF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L DL++IA + +P+L
Sbjct: 1909 QVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPDEDKDGNKANGGG-SSGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTL 2090
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: W2Q5P2_PHYPN (VWFA domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2Q5P2_PHYPN) HSP 1 Score: 258 bits (658), Expect = 2.240e-75 Identity = 141/234 (60.26%), Postives = 167/234 (71.37%), Query Frame = 1
Query: 1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPV---PDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSLAAPPSPSSASPSDAALIAATDGNSPENEESSTPRDAQSSILSRIIAFN 693
Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP PD + ++ G+ GG +S F WCDGVFL ALKAG WVLLDELNLA+Q VLEGLN+CLDHR VYIPEL R F+CP TF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L DL++IA + +P+L S A SDAAL T +L RII FN
Sbjct: 1919 QVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPDDNVDDKDGKHTNGGS-SSGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTLHC--SVEEADMSDAALSGKT-------------------LLERIIGFN 2130
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: A0A6A3UTY1_9STRA (Midasin n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3UTY1_9STRA) HSP 1 Score: 257 bits (657), Expect = 3.060e-75 Identity = 139/234 (59.40%), Postives = 170/234 (72.65%), Query Frame = 1
Query: 1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPV---PDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSLAAPPSPSSASPSDAALIAATDGNSPENEESSTPRDAQSSILSRIIAFN 693
Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP P D+ ++ G+ + GG AS F WCDGVFL ALKAG WVLLDELNLA+Q VLEGLN+CLDHR VYIPEL R F+CP TF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L DL++IA + +P+L + + S SD+AL+ T +L R+I FN
Sbjct: 1939 QVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPADDTDDKGGKASQEGG-ASGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTLHC--AVTETSMSDSALVGQT-------------------LLERMIGFN 2150
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: A0A7R9VCY6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VCY6_9STRA) HSP 1 Score: 234 bits (598), Expect = 8.130e-75 Identity = 112/165 (67.88%), Postives = 138/165 (83.64%), Query Frame = 1
Query: 1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVD 495
Q++K +LLEGSPGVGKTSLISALA+ +GH+LVRINLSEQTD+SDL G+DLP+PD S ++ + + + F WCDGV L A+K G WVLLDELNLA+Q VLEGLN+CLDHRA ++IPELG++F CP TF++FAAQNPL QGGGRKGLP+SFL+RFTKVYV+
Sbjct: 57 QLKKPILLEGSPGVGKTSLISALASVSGHKLVRINLSEQTDISDLMGTDLPLPDESSYDE--ESVTETSPSKGNFRWCDGVLLKAIKRGDWVLLDELNLASQSVLEGLNSCLDHRANLFIPELGQTFDCPRTFRIFAAQNPLAQGGGRKGLPKSFLNRFTKVYVE 219
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: A0A225WMG0_9STRA (Midasin-like protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WMG0_9STRA) HSP 1 Score: 256 bits (653), Expect = 1.050e-74 Identity = 128/186 (68.82%), Postives = 150/186 (80.65%), Query Frame = 1
Query: 1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPV---PDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSL 549
Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP P D G +G+ GA + F WCDGVFL ALKAG WVLLDELNLA+Q VLEGLN+CLDHR VYIPEL R F+CPSTF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L DL++IA + +P L
Sbjct: 1885 QVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPGDDEGNNAGEDE----GARSMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPSTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPRL 2066 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16549.4707.1 >prot_Ecto-sp13_S_contig16549.4707.1 ID=prot_Ecto-sp13_S_contig16549.4707.1|Name=mRNA_Ecto-sp13_S_contig16549.4707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=231bp QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLback to top mRNA from alignment at Ecto-sp13_S_contig16549:2054..3588+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16549.4707.1 ID=mRNA_Ecto-sp13_S_contig16549.4707.1|Name=mRNA_Ecto-sp13_S_contig16549.4707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1535bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16549:2054..3588+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16549:2054..3588+ >mRNA_Ecto-sp13_S_contig16549.4707.1 ID=mRNA_Ecto-sp13_S_contig16549.4707.1|Name=mRNA_Ecto-sp13_S_contig16549.4707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=693bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16549:2054..3588+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |