prot_Ecto-sp13_S_contig16549.4707.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16549.4707.1
Unique Nameprot_Ecto-sp13_S_contig16549.4707.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length231
Homology
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: D7FL28_ECTSI (Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL28_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 3.340e-121
Identity = 210/234 (89.74%), Postives = 219/234 (93.59%), Query Frame = 0
Query:    1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSLAAPPSPSSASP--SDAALIAATDGNSPENEESST-PRDAQSSILSRIIAFN 231
            QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQ+GQ  EG  G +ARFSWCDGVFLSALKAG+WVLLDELNLATQ VLEGLNACLDHRAEVYIPELGRSFKCP TFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPL+PDDLLYIAVNKFPSLAAPPSPSS SP  SDAALIAATDGNS +NE+SS  P DA +S+LSR+IAFN
Sbjct: 1275 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQTGQPTEGSAGNNARFSWCDGVFLSALKAGRWVLLDELNLATQSVLEGLNACLDHRAEVYIPELGRSFKCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLTPDDLLYIAVNKFPSLAAPPSPSS-SPVSSDAALIAATDGNSQDNEKSSCIPCDA-ASMLSRMIAFN 1506          
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: A0A6H5JCJ9_9PHAE (Midasin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ9_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 4.400e-89
Identity = 150/162 (92.59%), Postives = 152/162 (93.83%), Query Frame = 0
Query:    1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKV 162
            QIRKAVLLEGSPGVGKTSLISALAAA GHELVRINLSEQTDVSDLFGSDLPVP TDSGE SGQQ EG G  SARF+WCDGVFLSALKAGKWVLLDELNLA Q VLEGLNACLDHRAEVYIPELGRSF+CP TFKVFAAQNPLGQGGGRKGLPRSFLSRFTKV
Sbjct:   93 QIRKAVLLEGSPGVGKTSLISALAAAAGHELVRINLSEQTDVSDLFGSDLPVPGTDSGELSGQQTEGSGATSARFTWCDGVFLSALKAGKWVLLDELNLAPQSVLEGLNACLDHRAEVYIPELGRSFRCPPTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKV 254          
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: A0A835Z947_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z947_9STRA)

HSP 1 Score: 264 bits (674), Expect = 1.500e-77
Identity = 131/184 (71.20%), Postives = 152/184 (82.61%), Query Frame = 0
Query:    1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSLA 184
            Q+RKAVLLEGSPGVGKT+L++ALAAA GH LVRINLSEQTD+SDL GSDLPV  +D                  F+WCDGVFL AL+AG WVLLDELNLA+Q VLEGLNACLDHRAEV++PELGR+F+CP TF+VFAAQNPL QGGGRKGLP+SFL+RFTKV+VD L PDDL++IA  +FP+LA
Sbjct: 1416 QLRKAVLLEGSPGVGKTALVTALAAAAGHPLVRINLSEQTDLSDLMGSDLPVAASDXXXXXXXXX------GPAFAWCDGVFLRALRAGHWVLLDELNLASQAVLEGLNACLDHRAEVFVPELGRAFRCPPTFRVFAAQNPLSQGGGRKGLPKSFLNRFTKVFVDALGPDDLMHIASGRFPALA 1593          
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: A0A662XM65_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XM65_9STRA)

HSP 1 Score: 261 bits (668), Expect = 1.010e-76
Identity = 128/186 (68.82%), Postives = 154/186 (82.80%), Query Frame = 0
Query:    1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSLAAP 186
            Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP   + + ++  +Q +GG  +S  F WCDGVFL ALKAG WVLLDELNLA+Q VLEGLN+CLDHR  VYIPEL R F+CPSTF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L   DL++IA + +PSL  P
Sbjct:  882 QVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSSTNDEGKEQADGGN-SSGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPSTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPSLHRP 1066          
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: G4ZMS6_PHYSP (VWFA domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=G4ZMS6_PHYSP)

HSP 1 Score: 259 bits (662), Expect = 6.510e-76
Identity = 138/233 (59.23%), Postives = 168/233 (72.10%), Query Frame = 0
Query:    1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPD--TDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSLAAPPSPSSASPSDAALIAATDGNSPENEESSTPRDAQSSILSRIIAFN 231
            Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP     TD  + +  +   GGG+S  F WCDGVFL ALKAG WVLLDELNLA+Q VLEGLN+CLDHR  VYIPEL R F+CP TF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L   DL++IA + +P+L    + +  S SD+AL+  T                   +L R+I FN
Sbjct: 1914 QVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPTDETDDNSSKPSQGGGSSGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTLHC--AVTETSMSDSALVGQT-------------------LLERMIGFN 2125          
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: D0NH58_PHYIT (Midasin n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NH58_PHYIT)

HSP 1 Score: 258 bits (660), Expect = 1.210e-75
Identity = 126/183 (68.85%), Postives = 151/183 (82.51%), Query Frame = 0
Query:    1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSL 183
            Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP   +   ++ G +  GGG +S  F WCDGVFL ALKAG WVLLDELNLA+Q VLEGLN+CLDHR  VYIPEL R F+CP TF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L   DL++IA + +P+L
Sbjct: 1909 QVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPDEDKDGNKANGGG-SSGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTL 2090          
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: W2Q5P2_PHYPN (VWFA domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2Q5P2_PHYPN)

HSP 1 Score: 258 bits (658), Expect = 2.240e-75
Identity = 141/234 (60.26%), Postives = 167/234 (71.37%), Query Frame = 0
Query:    1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPV---PDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSLAAPPSPSSASPSDAALIAATDGNSPENEESSTPRDAQSSILSRIIAFN 231
            Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP    PD +  ++ G+   GG  +S  F WCDGVFL ALKAG WVLLDELNLA+Q VLEGLN+CLDHR  VYIPEL R F+CP TF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L   DL++IA + +P+L    S   A  SDAAL   T                   +L RII FN
Sbjct: 1919 QVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPDDNVDDKDGKHTNGGS-SSGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTLHC--SVEEADMSDAALSGKT-------------------LLERIIGFN 2130          
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: A0A6A3UTY1_9STRA (Midasin n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3UTY1_9STRA)

HSP 1 Score: 257 bits (657), Expect = 3.060e-75
Identity = 139/234 (59.40%), Postives = 170/234 (72.65%), Query Frame = 0
Query:    1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPV---PDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSLAAPPSPSSASPSDAALIAATDGNSPENEESSTPRDAQSSILSRIIAFN 231
            Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP    P  D+ ++ G+  + GG AS  F WCDGVFL ALKAG WVLLDELNLA+Q VLEGLN+CLDHR  VYIPEL R F+CP TF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L   DL++IA + +P+L    + +  S SD+AL+  T                   +L R+I FN
Sbjct: 1939 QVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPADDTDDKGGKASQEGG-ASGMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPPTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPTLHC--AVTETSMSDSALVGQT-------------------LLERMIGFN 2150          
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: A0A7R9VCY6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VCY6_9STRA)

HSP 1 Score: 234 bits (598), Expect = 8.130e-75
Identity = 112/165 (67.88%), Postives = 138/165 (83.64%), Query Frame = 0
Query:    1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPVPDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVD 165
            Q++K +LLEGSPGVGKTSLISALA+ +GH+LVRINLSEQTD+SDL G+DLP+PD  S ++  + +     +   F WCDGV L A+K G WVLLDELNLA+Q VLEGLN+CLDHRA ++IPELG++F CP TF++FAAQNPL QGGGRKGLP+SFL+RFTKVYV+
Sbjct:   57 QLKKPILLEGSPGVGKTSLISALASVSGHKLVRINLSEQTDISDLMGTDLPLPDESSYDE--ESVTETSPSKGNFRWCDGVLLKAIKRGDWVLLDELNLASQSVLEGLNSCLDHRANLFIPELGQTFDCPRTFRIFAAQNPLAQGGGRKGLPKSFLNRFTKVYVE 219          
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Match: A0A225WMG0_9STRA (Midasin-like protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WMG0_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.050e-74
Identity = 128/186 (68.82%), Postives = 150/186 (80.65%), Query Frame = 0
Query:    1 QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDLPV---PDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLATQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKGLPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSL 183
            Q+ + ++LEGSPGVGKTSLISALAAA+GH LVRINLSEQTD+SDLFGSDLP    P  D G  +G+      GA + F WCDGVFL ALKAG WVLLDELNLA+Q VLEGLN+CLDHR  VYIPEL R F+CPSTF+VFAAQNPL QGGGRKGLP+SFL+RFT+V+V+ L   DL++IA + +P L
Sbjct: 1885 QVSRPIILEGSPGVGKTSLISALAAASGHRLVRINLSEQTDISDLFGSDLPAASSPGDDEGNNAGEDE----GARSMFEWCDGVFLRALKAGDWVLLDELNLASQSVLEGLNSCLDHRGSVYIPELDREFECPSTFRVFAAQNPLRQGGGRKGLPKSFLNRFTRVFVETLHEQDLIHIASSMYPRL 2066          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16549.4707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL28_ECTSI3.340e-12189.74Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JCJ9_9PHAE4.400e-8992.59Midasin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
A0A835Z947_9STRA1.500e-7771.20P-loop containing nucleoside triphosphate hydrolas... [more]
A0A662XM65_9STRA1.010e-7668.82Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
G4ZMS6_PHYSP6.510e-7659.23VWFA domain-containing protein n=8 Tax=Phytophthor... [more]
D0NH58_PHYIT1.210e-7568.85Midasin n=2 Tax=Phytophthora infestans TaxID=4787 ... [more]
W2Q5P2_PHYPN2.240e-7560.26VWFA domain-containing protein n=9 Tax=Phytophthor... [more]
A0A6A3UTY1_9STRA3.060e-7559.40Midasin n=6 Tax=Phytophthora fragariae TaxID=53985... [more]
A0A7R9VCY6_9STRA8.130e-7567.88Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A225WMG0_9STRA1.050e-7468.82Midasin-like protein n=1 Tax=Phytophthora megakary... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011704ATPase, dynein-related, AAA domainPFAMPF07728AAA_5coord: 6..159
e-value: 1.7E-16
score: 60.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..176
e-value: 3.2E-40
score: 139.3
NoneNo IPR availablePANTHERPTHR22908MIDASIN-RELATEDcoord: 1..231
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16549contigEcto-sp13_S_contig16549:2054..3586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16549.4707.1mRNA_Ecto-sp13_S_contig16549.4707.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16549 2054..3588 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16549.4707.1 ID=prot_Ecto-sp13_S_contig16549.4707.1|Name=mRNA_Ecto-sp13_S_contig16549.4707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=231bp
QIRKAVLLEGSPGVGKTSLISALAAATGHELVRINLSEQTDVSDLFGSDL
PVPDTDSGEQSGQQMEGGGGASARFSWCDGVFLSALKAGKWVLLDELNLA
TQVVLEGLNACLDHRAEVYIPELGRSFKCPSTFKVFAAQNPLGQGGGRKG
LPRSFLSRFTKVYVDPLSPDDLLYIAVNKFPSLAAPPSPSSASPSDAALI
AATDGNSPENEESSTPRDAQSSILSRIIAFN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011704ATPase_dyneun-rel_AAA
IPR027417P-loop_NTPase