mRNA_Ecto-sp13_S_contig16548.4706.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16548.4706.1
Unique NamemRNA_Ecto-sp13_S_contig16548.4706.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A6H5KDQ6_9PHAE (HSP100 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ6_9PHAE)

HSP 1 Score: 632 bits (1629), Expect = 9.320e-227
Identity = 334/338 (98.82%), Postives = 336/338 (99.41%), Query Frame = 1
Query:    1 SKQGRVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
            SKQGRVSDTSSKSMGQTLQKV+ AASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKY RDLTQAARDGKLDPVIGRDDEIRRT+QILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS
Sbjct:   77 SKQGRVSDTSSKSMGQTLQKVIVAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYSRDLTQAARDGKLDPVIGRDDEIRRTIQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 414          
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: D7FMK6_ECTSI (ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK6_ECTSI)

HSP 1 Score: 629 bits (1622), Expect = 1.140e-218
Identity = 333/338 (98.52%), Postives = 335/338 (99.11%), Query Frame = 1
Query:    1 SKQGRVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
            SKQGRVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVS+EHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKY RDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVT SDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIE +
Sbjct:   77 SKQGRVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSIEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYSRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTESDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEVT 414          
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A835Z9T5_9STRA (ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9T5_9STRA)

HSP 1 Score: 499 bits (1284), Expect = 5.350e-168
Identity = 255/308 (82.79%), Postives = 281/308 (91.23%), Query Frame = 1
Query:   91 ELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
            + GD F S+EHL LAL+ +DTRFT++ LQ QG  + K+ DA+  IRG QKV SRNPEA+YEAL +Y RDLTQAAR+GKLDPVIGRDDEIRRT+QILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGR+L++LDMGALIAGAKYRGEFEERLKAVLKE+T S G VV FIDEIH+VVGAGATSG+MDASNLLKPMLARGEL CIGATTLNEYKQ +EKDKALERRFQQV+VKQP VEDTVSILRGLKERYEVHH VR+QD++LVAAAQLS+RYI DRFLPDKAIDLVDEAAAKLNIE +
Sbjct:   90 KFGDKFCSIEHLVLALSSDDTRFTRRELQRQGITEAKLRDAIKEIRGKQKVDSRNPEASYEALSQYSRDLTQAAREGKLDPVIGRDDEIRRTIQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRRLIALDMGALIAGAKYRGEFEERLKAVLKEITESGGNVVTFIDEIHSVVGAGATSGAMDASNLLKPMLARGELSCIGATTLNEYKQFIEKDKALERRFQQVYVKQPTVEDTVSILRGLKERYEVHHKVRIQDSALVAAAQLSNRYITDRFLPDKAIDLVDEAAAKLNIEVT 397          
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A4D9CQJ1_9STRA (Clp R domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQJ1_9STRA)

HSP 1 Score: 499 bits (1285), Expect = 1.060e-167
Identity = 261/336 (77.68%), Postives = 295/336 (87.80%), Query Frame = 1
Query:    7 QGRVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
            Q +V D S+K M  TLQKV+  A   +  + D +VSVEHL L L   D+RF K AL  QG  + +I +A+ +IRG   VTSR PEA+YEALE+Y RDLTQAA+DGKLDPVIGRDDEIRRT+QILSRRTKNNPILLGEPGVGKTAIAEGLAQRIV+GDVPE LK R+LV+LDMGALIAGAKYRGEFEERLKAVLKEVT S+GQ++MFIDEIHTVVGAGATSG+MDASNLLKPMLARGELRCIGATTL EYKQ +EKDKALERRFQQV V+QP+VEDT++ILRGLK+RYEVHHGVR++D+SLVAAAQLSHRYI+DRFLPDKAIDLVDEAAAKLNIE +
Sbjct:   81 QPKVPDASNKMMSNTLQKVLDEAFKERDAMRDQYVSVEHLLLGLVAHDSRFLKPALTKQGVTEAQIREAIASIRGNNVVTSRTPEASYEALEQYSRDLTQAAKDGKLDPVIGRDDEIRRTIQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVSGDVPEPLKKRRLVALDMGALIAGAKYRGEFEERLKAVLKEVTESNGQIIMFIDEIHTVVGAGATSGAMDASNLLKPMLARGELRCIGATTLAEYKQFIEKDKALERRFQQVMVEQPSVEDTIAILRGLKDRYEVHHGVRIRDSSLVAAAQLSHRYISDRFLPDKAIDLVDEAAAKLNIEVT 416          
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A482RZ81_9ARCH (AAA family ATPase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ81_9ARCH)

HSP 1 Score: 473 bits (1218), Expect = 5.470e-164
Identity = 251/334 (75.15%), Postives = 281/334 (84.13%), Query Frame = 1
Query:   13 RVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
            RVSDTS+KSMG+TLQ  +  ASA + E  D F+SVEHL L  A E    +K+   +       +  AV +IRG  KVTSRN E AYEAL+KY RDLT AA +GKLDPVIGRD+EIRR +QILSRRTKNNPILLGEPGVGKTAIAEGLAQRIV+GDVPE+LKGRQL+SLDMGALIAGAKYRGEFEERLKAVL EV A+ GQVV+FIDEIHTVVGAGAT GSMDA NLLKP+LARGELRCIGATTL EYK  +EKDKALERRFQQV++ QP VEDT+SILRGLK++YEVHHGVR+ DA+LVAAA LSHRYI +RFLPDKAIDLVDEAAAKL IE +
Sbjct:   85 RVSDTSTKSMGRTLQDCLNKASAIKKEFTDQFISVEHLLLGAA-ETEGLSKRLFSELSLTLPTLKQAVQSIRGSNKVTSRNAEQAYEALQKYSRDLTAAAAEGKLDPVIGRDEEIRRAIQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVSGDVPETLKGRQLLSLDMGALIAGAKYRGEFEERLKAVLNEVQAAQGQVVLFIDEIHTVVGAGATEGSMDAGNLLKPLLARGELRCIGATTLKEYKLYIEKDKALERRFQQVYISQPTVEDTISILRGLKDKYEVHHGVRITDAALVAAATLSHRYITERFLPDKAIDLVDEAAAKLKIEVT 417          
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A1B7W9K9_9NOST (Clp protease ClpB (Fragment) n=1 Tax=Anabaena sp. MDT14b TaxID=1710886 RepID=A0A1B7W9K9_9NOST)

HSP 1 Score: 469 bits (1208), Expect = 2.820e-162
Identity = 244/336 (72.62%), Postives = 289/336 (86.01%), Query Frame = 1
Query:    4 KQGRVSDTS-SKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIE 1008
            +Q +VS TS S  +G++L  ++  A   + E  D F+S+EHL L  A++D RF K  LQ+ G D+ K+ + +  IRG QKVT +NPE  Y++LEKYGRDLT+AAR G+LDPVIGRDDEIRRTVQILSRRTKNNP+L+GEPGVGKTAIAEGLAQRIVAGDVP+SLK R+L+SLDMGALIAGAK+RGEFEERLKAVLKEVT S G +V+FIDEIHTVVGAGA+ G+MDA NLLKPMLARGELRCIGATTL+EY++ +EKD ALERRFQQV+V QPNV+DT+SILRGLKERYEVHHGVR+ D+SLVAAA LS+RYI+DRFLPDKAIDLVDEAAA+L +E
Sbjct:   72 RQPKVSGTSASVYLGRSLDTLLDRAEKYRQEFKDEFISIEHLLLGYAKDD-RFGKSLLQEFGLDESKLKNIIKEIRGKQKVTDQNPEGKYQSLEKYGRDLTEAARKGQLDPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKLISLDMGALIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGASQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYLEKDAALERRFQQVYVDQPNVQDTISILRGLKERYEVHHGVRISDSSLVAAATLSNRYISDRFLPDKAIDLVDEAAARLKME 406          
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A7R9U5N7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5N7_9STRA)

HSP 1 Score: 483 bits (1244), Expect = 5.060e-161
Identity = 251/334 (75.15%), Postives = 287/334 (85.93%), Query Frame = 1
Query:   13 RVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
            +VSD ++K MG TLQKV+ AA   + E GD++VS EHL L+L   D+ FT+K LQ  G  + K+  +V  IRG  KV S+NPEA YEAL KYGRDLT+ A  GKLDPVIGRD+EIRR +QILSRRTKNNPILLGEPGVGKTAIAEGLAQRIV+GDVPESLK R++VSLDMGALIAGAKYRGEFEERLKAVLKEV+ SDG +V+FIDEIHTVVGAG TSG+MDASNLLKPMLARGELRCIGATTLNEY+Q + +DKALERRFQQV V QP VE+ +SILRGLK+RYEVHHGVR++D++LVAAAQLS RYI DRFLPDKAIDLVDEAAAKLN+E +
Sbjct:  156 KVSDVTNKVMGSTLQKVLKAALGLRREYGDTYVSNEHLLLSLFSNDSSFTRKELQRDGVTEDKLRASVKNIRGVNKVDSKNPEATYEALSKYGRDLTEDAASGKLDPVIGRDEEIRRVIQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVSGDVPESLKRRRVVSLDMGALIAGAKYRGEFEERLKAVLKEVSESDGSIVLFIDEIHTVVGAGQTSGAMDASNLLKPMLARGELRCIGATTLNEYRQYISEDKALERRFQQVIVNQPTVEEAISILRGLKDRYEVHHGVRIRDSALVAAAQLSQRYITDRFLPDKAIDLVDEAAAKLNMEVT 489          
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A7S2W0U8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0U8_9STRA)

HSP 1 Score: 479 bits (1233), Expect = 1.060e-160
Identity = 246/327 (75.23%), Postives = 286/327 (87.46%), Query Frame = 1
Query:   34 KSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
            K MG TLQ+V+  A   QA + DSF++V+HL L+LA+EDTRF + AL+ QG     + +A+ A+RG  KVTS++ +  +EALE+YG+DLT+AA DGKLDPVIGRDDEIRR VQILSRRTKNNPILLGEPGVGKTAIAEGLAQRI++GDVP+SLK R+LVSLDMGALIAGAKYRGEFEERLKAVL EV  SDG +V+FIDEIHTVVGAGATSG+MDASNLLKP+LARGELRCIGATTL EYK+ +EKDKALERRFQQV V QP+VED VSILRGLKERYEVHHGVR++D++++AAA LS RY++DRFLPDKAIDLVDEAAAKLN E S
Sbjct:   43 KVMGATLQRVIKTAGDLQASMQDSFIAVDHLVLSLAKEDTRFLQDALRKQGVMTASVEEALRAVRGGSKVTSQSSDTTFEALEQYGQDLTRAAMDGKLDPVIGRDDEIRRAVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIISGDVPDSLKQRRLVSLDMGALIAGAKYRGEFEERLKAVLSEVQQSDGNIVLFIDEIHTVVGAGATSGAMDASNLLKPLLARGELRCIGATTLKEYKEYIEKDKALERRFQQVMVPQPSVEDAVSILRGLKERYEVHHGVRIKDSAIIAAASLSDRYVSDRFLPDKAIDLVDEAAAKLNNEVS 369          
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A0A6U4GP70_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GP70_9STRA)

HSP 1 Score: 479 bits (1233), Expect = 1.870e-159
Identity = 248/334 (74.25%), Postives = 286/334 (85.63%), Query Frame = 1
Query:   13 RVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS 1014
            +VSD S+K MGQ+LQ V++ A   + + GD +VS EHL LAL   + RFT + L+  G D+ K+  +V  +RG  K  ++NPEA YEALE+YGRDLT  A  GKLDPVIGRD+EIRR +QILSRRTKNNPILLGEPGVGKTAIAEGLAQRIV+GDVPESLK R LV+LDMGALIAGAKYRGEFEERLKAVLKEV+ SDG VV+FIDEIHTVVGAGAT G+MDASNLLKPMLARGELRCIGATTLNEY+Q++ +DKALERRFQQV V QP+VE+ +SILRGLK+RYEVHHGVR++D+SLVAAAQLS RYI DRFLPDKAIDLVDEAAAKLN+E +
Sbjct:  149 KVSDVSNKVMGQSLQTVLSKALGIRGDFGDRYVSTEHLLLALFLHEPRFTARELKAAGVDEAKLRASVEKVRGANKADTKNPEATYEALEQYGRDLTADAAAGKLDPVIGRDEEIRRVIQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVSGDVPESLKRRTLVALDMGALIAGAKYRGEFEERLKAVLKEVSESDGNVVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGELRCIGATTLNEYRQHISEDKALERRFQQVIVDQPSVEEAISILRGLKDRYEVHHGVRIRDSSLVAAAQLSQRYITDRFLPDKAIDLVDEAAAKLNMEVT 482          
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Match: A5GSF0_SYNR3 (Chaperone protein ClpB n=7 Tax=Synechococcales TaxID=1890424 RepID=A5GSF0_SYNR3)

HSP 1 Score: 475 bits (1222), Expect = 7.860e-159
Identity = 241/323 (74.61%), Postives = 283/323 (87.62%), Query Frame = 1
Query:   40 MGQTLQKVVAAASAAQAELGDSFVSVEHLFLALAREDTRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDLTQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTASDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNEYKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDASLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIE 1008
            +G+ LQ ++  A   + E GDS++S+EHL LALA  D+R  ++ L D G  DK + +A+ A+RG Q+VT +NPE  YE+L+KYGRDLT AARDGKLDPVIGRD+EIRRT+QILSRRTKNNP+L+GEPGVGKTAI EGLAQRIV GDVP +L+ RQL++LDMGALIAGAKYRGEFEERLKAVLKEVT+SDGQ+V+FIDEIHTVVGAGAT G+MDASNLLKPMLARGELRCIGATTL+E++Q++EKD ALERRFQQVFV QP VEDT+SILRGLKERYEVHHGVR+ D +LVAAA LS RYIADRFLPDKAIDLVDE+AA+L +E
Sbjct:   85 LGKGLQSLLEQAERNKQEFGDSYISIEHLLLALAG-DSRCGRQLLLDNGVQDKTLREAIQAVRGSQRVTDQNPEGTYESLQKYGRDLTAAARDGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPSALQNRQLIALDMGALIAGAKYRGEFEERLKAVLKEVTSSDGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVFVDQPTVEDTISILRGLKERYEVHHGVRIADTALVAAAVLSSRYIADRFLPDKAIDLVDESAARLKME 406          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16548.4706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDQ6_9PHAE9.320e-22798.82HSP100 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
D7FMK6_ECTSI1.140e-21898.52ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
A0A835Z9T5_9STRA5.350e-16882.79ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A4D9CQJ1_9STRA1.060e-16777.68Clp R domain-containing protein n=2 Tax=Monodopsid... [more]
A0A482RZ81_9ARCH5.470e-16475.15AAA family ATPase n=1 Tax=archaeon TaxID=1906665 R... [more]
A0A1B7W9K9_9NOST2.820e-16272.62Clp protease ClpB (Fragment) n=1 Tax=Anabaena sp. ... [more]
A0A7R9U5N7_9STRA5.060e-16175.15Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2W0U8_9STRA1.060e-16075.23Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U4GP70_9STRA1.870e-15974.25Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A5GSF0_SYNR37.860e-15974.61Chaperone protein ClpB n=7 Tax=Synechococcales Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16548contigEcto-sp13_S_contig16548:374..3860 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score633.6
Seed ortholog evalue5.1e-179
Seed eggNOG ortholog2880.D7FMK6
Preferred nameCLPB3
Model size1014
KEGG koko:K03695
KEGG Pathwayko04213,map04213
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006950,GO:0006986,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009657,GO:0009658,GO:0009941,GO:0009987,GO:0010033,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031967,GO:0031975,GO:0035966,GO:0042221,GO:0042623,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0071840
Exons6
EggNOG free text desc.ATP binding
EggNOG OGsCOG0542@1,KOG1051@2759
Cds size1014
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16548.4706.1prot_Ecto-sp13_S_contig16548.4706.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16548 374..3860 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462869.2949536-CDS-Ecto-sp13_S_contig16548:373..6461681462869.2949536-CDS-Ecto-sp13_S_contig16548:373..646Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16548 374..646 +
1681462869.306343-CDS-Ecto-sp13_S_contig16548:946..10941681462869.306343-CDS-Ecto-sp13_S_contig16548:946..1094Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16548 947..1094 +
1681462869.315115-CDS-Ecto-sp13_S_contig16548:1262..14171681462869.315115-CDS-Ecto-sp13_S_contig16548:1262..1417Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16548 1263..1417 +
1681462869.323641-CDS-Ecto-sp13_S_contig16548:1944..21271681462869.323641-CDS-Ecto-sp13_S_contig16548:1944..2127Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16548 1945..2127 +
1681462869.332005-CDS-Ecto-sp13_S_contig16548:3372..34471681462869.332005-CDS-Ecto-sp13_S_contig16548:3372..3447Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16548 3373..3447 +
1681462869.3431191-CDS-Ecto-sp13_S_contig16548:3680..38601681462869.3431191-CDS-Ecto-sp13_S_contig16548:3680..3860Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16548 3681..3860 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16548.4706.1

>prot_Ecto-sp13_S_contig16548.4706.1 ID=prot_Ecto-sp13_S_contig16548.4706.1|Name=mRNA_Ecto-sp13_S_contig16548.4706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=338bp
SKQGRVSDTSSKSMGQTLQKVVAAASAAQAELGDSFVSVEHLFLALARED
TRFTKKALQDQGTDDKKILDAVNAIRGPQKVTSRNPEAAYEALEKYGRDL
TQAARDGKLDPVIGRDDEIRRTVQILSRRTKNNPILLGEPGVGKTAIAEG
LAQRIVAGDVPESLKGRQLVSLDMGALIAGAKYRGEFEERLKAVLKEVTA
SDGQVVMFIDEIHTVVGAGATSGSMDASNLLKPMLARGELRCIGATTLNE
YKQNMEKDKALERRFQQVFVKQPNVEDTVSILRGLKERYEVHHGVRLQDA
SLVAAAQLSHRYIADRFLPDKAIDLVDEAAAKLNIEAS
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mRNA from alignment at Ecto-sp13_S_contig16548:374..3860+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16548.4706.1 ID=mRNA_Ecto-sp13_S_contig16548.4706.1|Name=mRNA_Ecto-sp13_S_contig16548.4706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3487bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16548:374..3860+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCAAAGCAAGGGCGTGTGTCGGACACAAGCTCCAAATCGATGGGCCAGAC CCTCCAAAAAGTCGTCGCGGCAGCCTCGGCAGCTCAAGCTGAACTGGGAG ACAGCTTTGTCTCTGTAGAGCATCTCTTCCTGGCCCTGGCAAGGGAAGAC ACCCGCTTTACGAAGAAAGCCTTACAAGATCAGGGCACCGACGACAAGAA GATTTTGGATGCTGTGAACGCAATCAGGGGCCCGCAGAAAGTCACAAGCA GGAACCCTGAGGCCGCGTACGAGGTACAAAGCTGTGCTCAGGCGAAGTCG ATGGGCATTGCTGCAGCGTAGACACTAACGATATGTTTGCTCTGAGATGG GTACGCATTTTGGTTGAACCATCGGCGTGACTCGTCCGGCATTTCTATAA TAAAATCAGTCTCAAGCTGCAGCAAATGCTGGCGTGCGGAATTGGTGCGT TGTCTATTGCGTTCACCTCGTTGGATGCGCGTTTTCTGTGTGCGAAAGGC ACTTCGTCGAATTCACATTTGGGGGTTGAGCCTTTTTCTGCGTCTCCTTT TTTGTTGACACGTTGTGAAACAGGCGCTCGAGAAATACGGTCGGGACTTG ACACAGGCCGCCCGAGACGGGAAGCTGGACCCTGTTATTGGACGCGACGA CGAGATCCGCAGGACGGTCCAGATTCTTAGCAGGCGCACGAAAAACAACC CTATTCTTCTGGGAGAGCCAGGTAAAATTCTACAACCTCAGCACAAACTG AAAAGACGTGCGACACCTTTCAGAACCTGCCGCAGAAGCCGAGCCGAGCA TACTCAAGCGTAGGAATCGAGGCTGTTCTGCTCTACTCTTGCATGTTTCA CGCATTGATGCAACAACATTCTCATGCAAAAACATTTAGGAGTGGGCAAG ACTGCGATTGCTGAAGGGCTTGCGCAGCGTATCGTTGCGGGTGACGTTCC GGAATCTCTAAAAGGCCGCCAGCTAGTGTCGCTCGATATGGGAGCTTTAA TCGCAGGCGCCAAGTACCGCGGAGAGTTCGAAGAACGCCTCAAGGTAATT TCCAGTAATATATTCCATGTACCGTCGTAGGTTGCGTTGTGACCAAGAAT TACTTCTCCTCAAGTGTTGGGTCGTCATGTCTTGTAGGAGGTCCCAGAGA CGCCGTGGCCAAGGCTCGTTGATTTTGCGCCCCTACGATCACCCTTTCAC TTCGAGACGGCCAGCATCGAGCTCGCACACCCTTTGTGTCTCATCGTGAA GGGTTTCCCTCAAATCTACCCATACCGGGTACTGTTGAATTTTTTCCCCG AGTCTTCCCAGCCGGGGGCACGTTGACCGAGAACATATCTTACCCCGGTA GATTGAAGTGTGTTACCCATGCAGAGCTCACACCCGGATATTTTGGGCCA GTCTTCTCATACCGGAGTAAAATGAGCAGCTTGCCATTGTGTATGCGCTC CCTGTAGAAGTATTGTCAGCAAGCACAGTTTCATGTCTGAACCGTACAAG CGTGGAGACGACGTGTCCCGCTCTCGCCACAAAACCTAAACGTCTCATCG ACTCGCGTGATGGCGTGGCAGGCAGTGTTGAAGGAGGTTACGGCGAGCGA CGGACAGGTCGTGATGTTCATCGACGAAATTCACACCGTGGTAGGCGCTG GGGCGACATCCGGGTCCATGGATGCAAGCAACCTTCTCAAGCCGATGCTG GCTCGCGGCGAGTTAAGGTGCATCGGTGCTACAACACTGAACGAATACAA GCAGGTTCGTATTTTGTCATTTTCCCCTGCAAGTATCTCACCCAGAAAGT AAATGGAAAAAAAGCTTTCCACCCAACGTTGACCCTTCCGTGTCAGGGTT GATTTCCTCGTCTATTCGTTTAGCTTCCCACAACTGGCTCTCTGTGCTCC AGGGTCTCACATAAGTGTACACACACAAATCACCCTGGCAAGCATGGTAG AGCAGTGATAATGAGCCCGTGAGCGGAACTCGTAGGAGTGGGGACGCGGT TGTAAGGGTGGCGAACTGCGGTTGTACCACTGCTGTACGACAGTAGCAAG TGTAGAGAGAGAAATTTGCAGCAGAGTATGCGAACGTGTGCATGCCTCTT TCTATCAGCAACCATCCGCACAGACGATATACCTGTGCAAGCACTTGCTG GCACAAGGATGTTCACTACCTCATCCCTGGACAGAGGATACTCAAGCACA ATGCGCTAGAGACGATGACGTCGAAGGCAAACCGCCTCATGCGCGCACCA AATCGATGGAAAAAGTAATGGCGCATTTAGCAAATCAATGATCATCCACT CTCTCGATGAAGATGTATTTAAATCATGGTAATTTTTTGCAGTTCCATGC TATACATACTCAAGTACATACAGCAGTGGGCTTAGAATAGTTGCTATCGC AACTGCAGTCACAACAACCCTTTCCCTTAGCAAAAATTGCACGCAGCGTC TCCGTTCACTCTCAATACACTGGCAACCCAACCCCAAGAATAGCAAGCAC CGAGGCAGCACGTTACTACTTCATCGCATCGGCTCTAGTGTGCGTTGTCT CTGCTCTCTTGCGCACACGCGGGATCGGGTTGATCACATGTTGAGGGTGC CTATTTACCTACCGATGGGTATTTTCCATTTGGATCTCGGCAGTTCATTG ATTCTGGACATCTGCCCCACATTAAAACGCGATTAGGCATTGCAAATAGT GCTGTGTGTACCCTGCTTGTTTGCGTGCTTTTTTGGTGGGCTGCCTCTTG GTCTCTCTTTCAGTCTCTCAAGTATGTTTTTTTTCTTTGGCGAGACACTT CGGCTATCTTTTGGCGCACAAAGTAATCGGAACCGCGCCCGGAACGCAAT CGGGCCTGTAGTCACACAAGGGTCTCGGTGGTTGTGCTTCCATTCCGATC TTGTAACGGCGAGAGTCAGATCTTGACGGTGCTTGGGAGGCTCAATCGGA GTGCGGTGGTTGTTGACTTATATTTCTCCTCCCTTGCTTTGCACGGCAGA ACATGGAGAAAGACAAGGCCCTGGAGAGGAGGTTTCAGCAGGTTTTCGTG AAGCAGCCGAACGTGGAGGATACTGTGAGCGTCTGCCTTACCGTTTGTGA ACATTGATTTAACGTATGCAACAGCTTGGTGTGCATGAAAGCAAATCGAC CTCATCGCATGTCGGAGATAGGTCTTGCAGAAGTCCCACTGGTTGCTTGT GGTATTGCGGCTGTCGTGAGTGCGCTCGCGAACACTTGGAACATTTTGAA CGGGCGCGATATACGAGTGTTTCTGAAATACGGCACCTTGATTACTTCGG ATGGCAGGTGAGCATCCTACGGGGTTTGAAAGAGCGTTACGAAGTGCACC ACGGAGTTCGACTTCAGGATGCATCGCTCGTCGCCGCCGCCCAGCTCAGC CATCGATACATCGCAGACAGATTTCTCCCTGATAAGGCCATAGATCTTGT GGATGAAGCAGCTGCCAAACTCAACATCGAGGCAAGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16548:374..3860+

>mRNA_Ecto-sp13_S_contig16548.4706.1 ID=mRNA_Ecto-sp13_S_contig16548.4706.1|Name=mRNA_Ecto-sp13_S_contig16548.4706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1014bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16548:374..3860+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCAAAGCAAGGGCGTGTGTCGGACACAAGCTCCAAATCGATGGGCCAGAC
CCTCCAAAAAGTCGTCGCGGCAGCCTCGGCAGCTCAAGCTGAACTGGGAG
ACAGCTTTGTCTCTGTAGAGCATCTCTTCCTGGCCCTGGCAAGGGAAGAC
ACCCGCTTTACGAAGAAAGCCTTACAAGATCAGGGCACCGACGACAAGAA
GATTTTGGATGCTGTGAACGCAATCAGGGGCCCGCAGAAAGTCACAAGCA
GGAACCCTGAGGCCGCGTACGAGGCGCTCGAGAAATACGGTCGGGACTTG
ACACAGGCCGCCCGAGACGGGAAGCTGGACCCTGTTATTGGACGCGACGA
CGAGATCCGCAGGACGGTCCAGATTCTTAGCAGGCGCACGAAAAACAACC
CTATTCTTCTGGGAGAGCCAGGAGTGGGCAAGACTGCGATTGCTGAAGGG
CTTGCGCAGCGTATCGTTGCGGGTGACGTTCCGGAATCTCTAAAAGGCCG
CCAGCTAGTGTCGCTCGATATGGGAGCTTTAATCGCAGGCGCCAAGTACC
GCGGAGAGTTCGAAGAACGCCTCAAGGCAGTGTTGAAGGAGGTTACGGCG
AGCGACGGACAGGTCGTGATGTTCATCGACGAAATTCACACCGTGGTAGG
CGCTGGGGCGACATCCGGGTCCATGGATGCAAGCAACCTTCTCAAGCCGA
TGCTGGCTCGCGGCGAGTTAAGGTGCATCGGTGCTACAACACTGAACGAA
TACAAGCAGAACATGGAGAAAGACAAGGCCCTGGAGAGGAGGTTTCAGCA
GGTTTTCGTGAAGCAGCCGAACGTGGAGGATACTGTGAGCATCCTACGGG
GTTTGAAAGAGCGTTACGAAGTGCACCACGGAGTTCGACTTCAGGATGCA
TCGCTCGTCGCCGCCGCCCAGCTCAGCCATCGATACATCGCAGACAGATT
TCTCCCTGATAAGGCCATAGATCTTGTGGATGAAGCAGCTGCCAAACTCA
ACATCGAGGCAAGT
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